RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 UQCR11O14957 56 aa8.51□□□□□ -1.05
PRKCH-216ENST00000555542 LCE4AQ5TA78 99 aa8.5□□□□□ -1.05
PRKCH-216ENST00000555542 GPR98Q8WXG9 6306 aa8.5□□□□□ -1.05
PRKCH-216ENST00000555542 KRTAP4-3Q9BYR4 195 aa8.49□□□□□ -1.05
PRKCH-216ENST00000555542 MT4P47944 62 aa8.46□□□□□ -1.06
PRKCH-216ENST00000555542 KRTAP12-3P60328 96 aa8.4□□□□□ -1.06
PRKCH-216ENST00000555542 MIR22HGQ0VDD5 57 aa8.32□□□□□ -1.08
PRKCH-216ENST00000555542 HMCN1Q96RW7 5635 aa8.29□□□□□ -1.08
PRKCH-216ENST00000555542 KRTAP5-4Q6L8H1 288 aa8.27□□□□□ -1.09
PRKCH-216ENST00000555542 KRTAP4-7Q9BYR0 210 aa8.27□□□□□ -1.09
PRKCH-216ENST00000555542 K7ERS5 55 aa8.24□□□□□ -1.09
PRKCH-216ENST00000555542 KRTAP25-1Q3LHN0 102 aa8.22□□□□□ -1.09
PRKCH-216ENST00000555542 KRTAP4-6Q9BYQ5 205 aa8.16□□□□□ -1.1
PRKCH-216ENST00000555542 PSPHP1O15172 72 aa8.12□□□□□ -1.11
PRKCH-216ENST00000555542 V9GYY9 64 aa8.12□□□□□ -1.11
PRKCH-216ENST00000555542 AHNAK2Q8IVF2 5795 aa8.03□□□□□ -1.12
PRKCH-216ENST00000555542 Q1T7F1 81 aa8□□□□□ -1.13
PRKCH-216ENST00000555542 KRTAP5-10Q6L8G5 202 aa7.91□□□□□ -1.14
PRKCH-216ENST00000555542 KRTAP5-5Q701N2 237 aaPredicted RBP7.91□□□□□ -1.14
PRKCH-216ENST00000555542 KRTAP19-4Q3LI73 84 aa7.87□□□□□ -1.15
PRKCH-216ENST00000555542 KRTAP23-1A1A580 65 aa7.86□□□□□ -1.15
PRKCH-216ENST00000555542 A6NED7 52 aa7.86□□□□□ -1.15
PRKCH-216ENST00000555542 KRTAP20-2Q3LI61 65 aa7.85□□□□□ -1.15
PRKCH-216ENST00000555542 LOC100996750A0A140TA64 210 aa7.84□□□□□ -1.15
PRKCH-216ENST00000555542 KRTAP12-4P60329 112 aa7.82□□□□□ -1.16
PRKCH-216ENST00000555542 KRTAP15-1Q3LI76 137 aa7.81□□□□□ -1.16
PRKCH-216ENST00000555542 SPRR5A0A1B0GTR4 108 aa7.8□□□□□ -1.16
PRKCH-216ENST00000555542 CDC42SE1Q9NRR8 79 aa7.76□□□□□ -1.17
PRKCH-216ENST00000555542 KRTAP5-3Q6L8H2 238 aa7.74□□□□□ -1.17
PRKCH-216ENST00000555542 LCE3CQ5T5A8 94 aa7.71□□□□□ -1.18
PRKCH-216ENST00000555542 KRTAP5-7Q6L8G8 165 aa7.62□□□□□ -1.19
PRKCH-216ENST00000555542 ROMO1P60602 79 aa7.6□□□□□ -1.19
PRKCH-216ENST00000555542 SYNE1Q8NF91 8797 aaKnown RBP7.59□□□□□ -1.19
PRKCH-216ENST00000555542 RPS28P62857 69 aaKnown RBP7.55□□□□□ -1.2
PRKCH-216ENST00000555542 MT1AP04731 61 aa7.4□□□□□ -1.22
PRKCH-216ENST00000555542 KRTAP6-1Q3LI64 71 aa7.35□□□□□ -1.23
PRKCH-216ENST00000555542 PCP4P48539 62 aa7.25□□□□□ -1.25
PRKCH-216ENST00000555542 KRTAP5-2Q701N4 177 aa7.23□□□□□ -1.25
PRKCH-216ENST00000555542 KRTAP9-6A8MVA2 160 aa7.22□□□□□ -1.25
PRKCH-216ENST00000555542 KRTAP4-11Q9BYQ6 195 aa7.19□□□□□ -1.26
PRKCH-216ENST00000555542 KRTAP9-4Q9BYQ2 154 aa7.15□□□□□ -1.26
PRKCH-216ENST00000555542 KRTAP6-2Q3LI66 62 aa7.06□□□□□ -1.28
PRKCH-216ENST00000555542 KRTAP5-8O75690 187 aa6.93□□□□□ -1.3
PRKCH-216ENST00000555542 OBSCNQ5VST9 7968 aa6.8□□□□□ -1.32
PRKCH-216ENST00000555542 MT3P25713 68 aa6.79□□□□□ -1.32
PRKCH-216ENST00000555542 KRTAP9-9Q9BYP9 154 aa6.65□□□□□ -1.34
PRKCH-216ENST00000555542 BRK1Q8WUW1 75 aa6.62□□□□□ -1.35
PRKCH-216ENST00000555542 MUC5ACP98088 5654 aa6.59□□□□□ -1.35
PRKCH-216ENST00000555542 MUC5BQ9HC84 5762 aaPredicted RBP6.58□□□□□ -1.36
PRKCH-216ENST00000555542 AHNAKQ09666 5890 aaKnown RBP6.58□□□□□ -1.36
PRKCH-216ENST00000555542 KRTAP5-1Q6L8H4 278 aa6.5□□□□□ -1.37
PRKCH-216ENST00000555542 LCE1EQ5T753 118 aa6.21□□□□□ -1.42
PRKCH-216ENST00000555542 PMAIP1Q13794 54 aa6.19□□□□□ -1.42
PRKCH-216ENST00000555542 PRAC1Q96KF2 57 aa6□□□□□ -1.45
PRKCH-216ENST00000555542 LCE1BQ5T7P3 118 aa5.94□□□□□ -1.46
PRKCH-216ENST00000555542 KRTAP4-2Q9BYR5 136 aa5.86□□□□□ -1.47
PRKCH-216ENST00000555542 LCE1CQ5T751 118 aa5.77□□□□□ -1.49
PRKCH-216ENST00000555542 LCE3DQ9BYE3 92 aa5.56□□□□□ -1.52
PRKCH-216ENST00000555542 PRO0628Q9UI54 55 aa5.54□□□□□ -1.52
PRKCH-216ENST00000555542 KRTAP4-12Q9BQ66 201 aa5.4□□□□□ -1.54
PRKCH-216ENST00000555542 KTN1-AS1Q86SY8 53 aa5.37□□□□□ -1.55
PRKCH-216ENST00000555542 SVIPQ8NHG7 77 aa5.29□□□□□ -1.56
PRKCH-216ENST00000555542 KRTAP5-11Q6L8G4 156 aa5.23□□□□□ -1.57
PRKCH-216ENST00000555542 LCE3EQ5T5B0 92 aa5.21□□□□□ -1.58
PRKCH-216ENST00000555542 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.21□□□□□ -1.58
PRKCH-216ENST00000555542 LUZP6Q538Z0 58 aa5.16□□□□□ -1.58
PRKCH-216ENST00000555542 LCE1FQ5T754 118 aa5.11□□□□□ -1.59
PRKCH-216ENST00000555542 KRTAP21-2Q3LI59 83 aa4.82□□□□□ -1.64
PRKCH-216ENST00000555542 PHGR1C9JFL3 82 aa4.67□□□□□ -1.66
PRKCH-216ENST00000555542 KRTAP4-4Q9BYR3 166 aa4.48□□□□□ -1.69
PRKCH-216ENST00000555542 MUC19Q7Z5P9 8384 aa4.18□□□□□ -1.74
PRKCH-216ENST00000555542 NDUFAF8A1L188 74 aa3.91□□□□□ -1.78
PRKCH-216ENST00000555542 PRM1P04553 51 aa3.89□□□□□ -1.79
PRKCH-216ENST00000555542 KRTAP21-1Q3LI58 79 aa3.53□□□□□ -1.84
PRKCH-216ENST00000555542 INE1O15225 51 aa3.08□□□□□ -1.92
PRKCH-216ENST00000555542 MUC16Q8WXI7 14507 aa2.99□□□□□ -1.93
PRKCH-216ENST00000555542 A0A0A0MQY5 61 aa2.98□□□□□ -1.93
PRKCH-216ENST00000555542 H3BS24 57 aa2.87□□□□□ -1.95
Retrieved 78 of 20,778 RNA–protein pairs in 70.2 ms