RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 M0QZ58 72 aa1.7□□□□□ -2.14
VTI1B-203ENST00000554636 COX7CP15954 63 aa1.7□□□□□ -2.14
VTI1B-203ENST00000554636 KRTAP20-1Q3LI63 56 aa1.7□□□□□ -2.14
VTI1B-203ENST00000554636 CAMK2N1Q7Z7J9 78 aa1.7□□□□□ -2.14
VTI1B-203ENST00000554636 PRO2289Q9P1D8 64 aa1.7□□□□□ -2.14
VTI1B-203ENST00000554636 R4GN34 69 aa1.7□□□□□ -2.14
VTI1B-203ENST00000554636 PLAC4Q8WY50 150 aa1.69□□□□□ -2.14
VTI1B-203ENST00000554636 K7ERS5 55 aa1.68□□□□□ -2.14
VTI1B-203ENST00000554636 ACYP2P14621 99 aa1.68□□□□□ -2.14
VTI1B-203ENST00000554636 SERP1Q9Y6X1 66 aa1.68□□□□□ -2.14
VTI1B-203ENST00000554636 LINC01554Q52M75 96 aa1.67□□□□□ -2.14
VTI1B-203ENST00000554636 BRK1Q8WUW1 75 aa1.67□□□□□ -2.14
VTI1B-203ENST00000554636 SPRR2FQ96RM1 72 aa1.67□□□□□ -2.14
VTI1B-203ENST00000554636 SNURFQ9Y675 71 aa1.67□□□□□ -2.14
VTI1B-203ENST00000554636 SPRR2EP22531 72 aa1.66□□□□□ -2.14
VTI1B-203ENST00000554636 SPRR2BP35325 72 aa1.66□□□□□ -2.14
VTI1B-203ENST00000554636 SPRR2AP35326 72 aa1.66□□□□□ -2.14
VTI1B-203ENST00000554636 KTN1-AS1Q86SY8 53 aa1.66□□□□□ -2.14
VTI1B-203ENST00000554636 KRTAP8-1Q8IUC2 63 aa1.66□□□□□ -2.14
VTI1B-203ENST00000554636 CHKB-CPT1BH3BT56 60 aa1.65□□□□□ -2.15
VTI1B-203ENST00000554636 SPANXA2-OT1Q8N9U9 137 aa1.65□□□□□ -2.15
VTI1B-203ENST00000554636 SPTSSBQ8NFR3 76 aa1.65□□□□□ -2.15
VTI1B-203ENST00000554636 KRTAP2-3P0C7H8 128 aa1.64□□□□□ -2.15
VTI1B-203ENST00000554636 KRTAP13-4Q3LI77 160 aa1.64□□□□□ -2.15
VTI1B-203ENST00000554636 SERP2Q8N6R1 65 aa1.64□□□□□ -2.15
VTI1B-203ENST00000554636 KRTAP2-4Q9BYR9 128 aa1.64□□□□□ -2.15
VTI1B-203ENST00000554636 CYSTM1Q9H1C7 97 aa1.64□□□□□ -2.15
VTI1B-203ENST00000554636 ATP5EP56381 51 aaPredicted RBP1.62□□□□□ -2.15
VTI1B-203ENST00000554636 COA5Q86WW8 74 aa1.61□□□□□ -2.15
VTI1B-203ENST00000554636 H7BZZ5 65 aa1.6□□□□□ -2.15
VTI1B-203ENST00000554636 SPRR2DP22532 72 aa1.6□□□□□ -2.15
VTI1B-203ENST00000554636 LUZP6Q538Z0 58 aa1.6□□□□□ -2.15
VTI1B-203ENST00000554636 A6NED7 52 aa1.59□□□□□ -2.15
VTI1B-203ENST00000554636 Q1T7F1 81 aa1.59□□□□□ -2.15
VTI1B-203ENST00000554636 KRTAP2-1Q9BYU5 128 aa1.58□□□□□ -2.16
VTI1B-203ENST00000554636 KRTAP19-7Q3SYF9 63 aa1.56□□□□□ -2.16
VTI1B-203ENST00000554636 A0A0D9SG42 100 aa1.55□□□□□ -2.16
VTI1B-203ENST00000554636 MT1EP04732 61 aa1.55□□□□□ -2.16
VTI1B-203ENST00000554636 SPATA8Q6RVD6 105 aa1.55□□□□□ -2.16
VTI1B-203ENST00000554636 AHNAKQ09666 5890 aaKnown RBP1.55□□□□□ -2.16
VTI1B-203ENST00000554636 KRTAP12-1P59990 96 aa1.54□□□□□ -2.16
VTI1B-203ENST00000554636 A0A1B0GU33 70 aa1.53□□□□□ -2.16
VTI1B-203ENST00000554636 SPINT4Q6UDR6 99 aa1.53□□□□□ -2.16
VTI1B-203ENST00000554636 AHNAK2Q8IVF2 5795 aa1.53□□□□□ -2.16
VTI1B-203ENST00000554636 KRTAP19-3Q7Z4W3 81 aa1.52□□□□□ -2.17
VTI1B-203ENST00000554636 KRTAP12-3P60328 96 aa1.51□□□□□ -2.17
VTI1B-203ENST00000554636 KRTAP19-5Q3LI72 72 aa1.51□□□□□ -2.17
VTI1B-203ENST00000554636 CDC42SE1Q9NRR8 79 aa1.51□□□□□ -2.17
VTI1B-203ENST00000554636 A0A1B0GU69 56 aa1.5□□□□□ -2.17
VTI1B-203ENST00000554636 KRTAP21-2Q3LI59 83 aa1.5□□□□□ -2.17
VTI1B-203ENST00000554636 DSTQ03001 7570 aaKnown RBP1.5□□□□□ -2.17
VTI1B-203ENST00000554636 C10orf95Q9H7T3 257 aa1.48□□□□□ -2.17
VTI1B-203ENST00000554636 MT1GP13640 62 aa1.47□□□□□ -2.17
VTI1B-203ENST00000554636 KRTAP12-4P60329 112 aa1.47□□□□□ -2.17
VTI1B-203ENST00000554636 MT1MQ8N339 61 aa1.47□□□□□ -2.17
VTI1B-203ENST00000554636 MT1LQ93083 61 aa1.47□□□□□ -2.17
VTI1B-203ENST00000554636 LINC01558Q9Y6Z2 57 aa1.46□□□□□ -2.18
VTI1B-203ENST00000554636 HMCN1Q96RW7 5635 aa1.46□□□□□ -2.18
VTI1B-203ENST00000554636 TNP1P09430 55 aa1.45□□□□□ -2.18
VTI1B-203ENST00000554636 ROMO1P60602 79 aa1.45□□□□□ -2.18
VTI1B-203ENST00000554636 PRR15LQ9BU68 103 aa1.44□□□□□ -2.18
VTI1B-203ENST00000554636 MIR22HGQ0VDD5 57 aa1.41□□□□□ -2.18
VTI1B-203ENST00000554636 UQCR11O14957 56 aa1.4□□□□□ -2.19
VTI1B-203ENST00000554636 MT4P47944 62 aa1.4□□□□□ -2.19
VTI1B-203ENST00000554636 KRTAP25-1Q3LHN0 102 aa1.39□□□□□ -2.19
VTI1B-203ENST00000554636 SYNE1Q8NF91 8797 aaKnown RBP1.38□□□□□ -2.19
VTI1B-203ENST00000554636 MUC5BQ9HC84 5762 aaPredicted RBP1.38□□□□□ -2.19
VTI1B-203ENST00000554636 KRTAP5-10Q6L8G5 202 aa1.34□□□□□ -2.19
VTI1B-203ENST00000554636 KRTAP20-2Q3LI61 65 aa1.33□□□□□ -2.2
VTI1B-203ENST00000554636 INE1O15225 51 aa1.25□□□□□ -2.21
VTI1B-203ENST00000554636 MT1AP04731 61 aa1.25□□□□□ -2.21
VTI1B-203ENST00000554636 KRTAP6-1Q3LI64 71 aa1.25□□□□□ -2.21
VTI1B-203ENST00000554636 KRTAP6-2Q3LI66 62 aa1.18□□□□□ -2.22
VTI1B-203ENST00000554636 MUC5ACP98088 5654 aa1.18□□□□□ -2.22
VTI1B-203ENST00000554636 MUC16Q8WXI7 14507 aa0.81□□□□□ -2.28
VTI1B-203ENST00000554636 PHGR1C9JFL3 82 aa0.76□□□□□ -2.29
VTI1B-203ENST00000554636 PRM1P04553 51 aa0.65□□□□□ -2.31
VTI1B-203ENST00000554636 KRTAP21-1Q3LI58 79 aa0.58□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 96.9 ms