RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 LCE1AQ5T7P2 110 aa3.47□□□□□ -1.85
ACTN1-213ENST00000554508 KRTAP12-1P59990 96 aa3.45□□□□□ -1.86
ACTN1-213ENST00000554508 KRTAP4-9Q9BYQ8 210 aa3.44□□□□□ -1.86
ACTN1-213ENST00000554508 SPRR2DP22532 72 aa3.41□□□□□ -1.86
ACTN1-213ENST00000554508 PRO0628Q9UI54 55 aa3.41□□□□□ -1.86
ACTN1-213ENST00000554508 KRTAP2-2Q9BYT5 123 aa3.4□□□□□ -1.87
ACTN1-213ENST00000554508 KRTAP2-1Q9BYU5 128 aa3.4□□□□□ -1.87
ACTN1-213ENST00000554508 PMAIP1Q13794 54 aa3.36□□□□□ -1.87
ACTN1-213ENST00000554508 C10orf95Q9H7T3 257 aa3.28□□□□□ -1.88
ACTN1-213ENST00000554508 ROMO1P60602 79 aa3.27□□□□□ -1.89
ACTN1-213ENST00000554508 KRTAP19-7Q3SYF9 63 aa3.27□□□□□ -1.89
ACTN1-213ENST00000554508 MT1EP04732 61 aa3.24□□□□□ -1.89
ACTN1-213ENST00000554508 TNP1P09430 55 aa3.24□□□□□ -1.89
ACTN1-213ENST00000554508 LCE5AQ5TCM9 118 aa3.24□□□□□ -1.89
ACTN1-213ENST00000554508 KRTAP4-11Q9BYQ6 195 aa3.24□□□□□ -1.89
ACTN1-213ENST00000554508 KRTAP19-3Q7Z4W3 81 aa3.23□□□□□ -1.89
ACTN1-213ENST00000554508 DSTQ03001 7570 aaKnown RBP3.2□□□□□ -1.9
ACTN1-213ENST00000554508 KRTAP19-5Q3LI72 72 aa3.18□□□□□ -1.9
ACTN1-213ENST00000554508 KTN1-AS1Q86SY8 53 aa3.18□□□□□ -1.9
ACTN1-213ENST00000554508 MT1GP13640 62 aa3.17□□□□□ -1.9
ACTN1-213ENST00000554508 KRTAP25-1Q3LHN0 102 aa3.16□□□□□ -1.9
ACTN1-213ENST00000554508 LCE3AQ5TA76 89 aa3.15□□□□□ -1.91
ACTN1-213ENST00000554508 PP632Q6XCG6 107 aa3.15□□□□□ -1.91
ACTN1-213ENST00000554508 MT1LQ93083 61 aa3.1□□□□□ -1.91
ACTN1-213ENST00000554508 MT1MQ8N339 61 aa3.09□□□□□ -1.91
ACTN1-213ENST00000554508 SVIPQ8NHG7 77 aa3.09□□□□□ -1.91
ACTN1-213ENST00000554508 PRAC1Q96KF2 57 aa3.08□□□□□ -1.92
ACTN1-213ENST00000554508 LCE4AQ5TA78 99 aa3.04□□□□□ -1.92
ACTN1-213ENST00000554508 KRTAP12-3P60328 96 aa3.03□□□□□ -1.92
ACTN1-213ENST00000554508 KRTAP23-1A1A580 65 aa3.02□□□□□ -1.93
ACTN1-213ENST00000554508 KRTAP4-3Q9BYR4 195 aa2.99□□□□□ -1.93
ACTN1-213ENST00000554508 MT4P47944 62 aa2.97□□□□□ -1.93
ACTN1-213ENST00000554508 KRTAP5-4Q6L8H1 288 aa2.96□□□□□ -1.94
ACTN1-213ENST00000554508 GPR98Q8WXG9 6306 aa2.95□□□□□ -1.94
ACTN1-213ENST00000554508 HMCN1Q96RW7 5635 aa2.93□□□□□ -1.94
ACTN1-213ENST00000554508 KRTAP19-4Q3LI73 84 aa2.9□□□□□ -1.95
ACTN1-213ENST00000554508 KRTAP15-1Q3LI76 137 aa2.9□□□□□ -1.95
ACTN1-213ENST00000554508 AHNAK2Q8IVF2 5795 aa2.87□□□□□ -1.95
ACTN1-213ENST00000554508 KRTAP5-5Q701N2 237 aaPredicted RBP2.84□□□□□ -1.95
ACTN1-213ENST00000554508 LCE3CQ5T5A8 94 aa2.81□□□□□ -1.96
ACTN1-213ENST00000554508 SPRR5A0A1B0GTR4 108 aa2.8□□□□□ -1.96
ACTN1-213ENST00000554508 KRTAP5-10Q6L8G5 202 aa2.8□□□□□ -1.96
ACTN1-213ENST00000554508 KRTAP12-4P60329 112 aa2.79□□□□□ -1.96
ACTN1-213ENST00000554508 KRTAP20-2Q3LI61 65 aa2.78□□□□□ -1.96
ACTN1-213ENST00000554508 SYNE1Q8NF91 8797 aaKnown RBP2.74□□□□□ -1.97
ACTN1-213ENST00000554508 KRTAP5-7Q6L8G8 165 aa2.7□□□□□ -1.98
ACTN1-213ENST00000554508 LUZP6Q538Z0 58 aa2.67□□□□□ -1.98
ACTN1-213ENST00000554508 MT1AP04731 61 aa2.65□□□□□ -1.99
ACTN1-213ENST00000554508 KRTAP9-6A8MVA2 160 aa2.63□□□□□ -1.99
ACTN1-213ENST00000554508 KRTAP6-1Q3LI64 71 aa2.62□□□□□ -1.99
ACTN1-213ENST00000554508 KRTAP5-2Q701N4 177 aa2.59□□□□□ -1.99
ACTN1-213ENST00000554508 KRTAP6-2Q3LI66 62 aa2.5□□□□□ -2.01
ACTN1-213ENST00000554508 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.48□□□□□ -2.01
ACTN1-213ENST00000554508 NDUFAF8A1L188 74 aa2.46□□□□□ -2.02
ACTN1-213ENST00000554508 KRTAP5-8O75690 187 aa2.46□□□□□ -2.02
ACTN1-213ENST00000554508 MT3P25713 68 aa2.44□□□□□ -2.02
ACTN1-213ENST00000554508 OBSCNQ5VST9 7968 aa2.42□□□□□ -2.02
ACTN1-213ENST00000554508 AHNAKQ09666 5890 aaKnown RBP2.35□□□□□ -2.03
ACTN1-213ENST00000554508 MUC5BQ9HC84 5762 aaPredicted RBP2.34□□□□□ -2.04
ACTN1-213ENST00000554508 MUC5ACP98088 5654 aa2.33□□□□□ -2.04
ACTN1-213ENST00000554508 KRTAP5-1Q6L8H4 278 aa2.32□□□□□ -2.04
ACTN1-213ENST00000554508 A0A0A0MQY5 61 aa2.25□□□□□ -2.05
ACTN1-213ENST00000554508 LCE1EQ5T753 118 aa2.25□□□□□ -2.05
ACTN1-213ENST00000554508 KRTAP5-11Q6L8G4 156 aa2.19□□□□□ -2.06
ACTN1-213ENST00000554508 KRTAP4-4Q9BYR3 166 aa2.09□□□□□ -2.07
ACTN1-213ENST00000554508 H3BS24 57 aa2.08□□□□□ -2.08
ACTN1-213ENST00000554508 LCE1BQ5T7P3 118 aa2.08□□□□□ -2.08
ACTN1-213ENST00000554508 INE1O15225 51 aa2.07□□□□□ -2.08
ACTN1-213ENST00000554508 LCE1CQ5T751 118 aa2.07□□□□□ -2.08
ACTN1-213ENST00000554508 LCE3DQ9BYE3 92 aa2.07□□□□□ -2.08
ACTN1-213ENST00000554508 LCE3EQ5T5B0 92 aa1.98□□□□□ -2.09
ACTN1-213ENST00000554508 LCE1FQ5T754 118 aa1.85□□□□□ -2.11
ACTN1-213ENST00000554508 KRTAP21-2Q3LI59 83 aa1.73□□□□□ -2.13
ACTN1-213ENST00000554508 PRM1P04553 51 aa1.69□□□□□ -2.14
ACTN1-213ENST00000554508 PHGR1C9JFL3 82 aa1.63□□□□□ -2.15
ACTN1-213ENST00000554508 MUC19Q7Z5P9 8384 aa1.52□□□□□ -2.17
ACTN1-213ENST00000554508 KRTAP21-1Q3LI58 79 aa1.25□□□□□ -2.21
ACTN1-213ENST00000554508 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 17.1 ms