RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 KRTAP13-4Q3LI77 160 aa2.63□□□□□ -1.99
SLIRP-203ENST00000554074 UQCR11O14957 56 aa2.62□□□□□ -1.99
SLIRP-203ENST00000554074 SPATA8Q6RVD6 105 aa2.6□□□□□ -1.99
SLIRP-203ENST00000554074 A0A0D9SG42 100 aa2.58□□□□□ -2
SLIRP-203ENST00000554074 CAMK2N1Q7Z7J9 78 aa2.58□□□□□ -2
SLIRP-203ENST00000554074 KRTAP12-1P59990 96 aa2.56□□□□□ -2
SLIRP-203ENST00000554074 MIR22HGQ0VDD5 57 aa2.55□□□□□ -2
SLIRP-203ENST00000554074 SPINT4Q6UDR6 99 aa2.55□□□□□ -2
SLIRP-203ENST00000554074 PSPHP1O15172 72 aa2.54□□□□□ -2
SLIRP-203ENST00000554074 A8MU10 97 aa2.52□□□□□ -2.01
SLIRP-203ENST00000554074 K7ERS5 55 aa2.52□□□□□ -2.01
SLIRP-203ENST00000554074 DSTQ03001 7570 aaKnown RBP2.5□□□□□ -2.01
SLIRP-203ENST00000554074 A6NED7 52 aa2.5□□□□□ -2.01
SLIRP-203ENST00000554074 KRTAP19-7Q3SYF9 63 aa2.49□□□□□ -2.01
SLIRP-203ENST00000554074 MT1EP04732 61 aa2.47□□□□□ -2.01
SLIRP-203ENST00000554074 KRTAP19-3Q7Z4W3 81 aa2.47□□□□□ -2.01
SLIRP-203ENST00000554074 CDC42SE1Q9NRR8 79 aa2.45□□□□□ -2.02
SLIRP-203ENST00000554074 TNP1P09430 55 aa2.44□□□□□ -2.02
SLIRP-203ENST00000554074 AHNAK2Q8IVF2 5795 aa2.43□□□□□ -2.02
SLIRP-203ENST00000554074 C10orf95Q9H7T3 257 aa2.42□□□□□ -2.02
SLIRP-203ENST00000554074 MT1GP13640 62 aa2.41□□□□□ -2.02
SLIRP-203ENST00000554074 HMCN1Q96RW7 5635 aa2.41□□□□□ -2.02
SLIRP-203ENST00000554074 KRTAP25-1Q3LHN0 102 aa2.4□□□□□ -2.03
SLIRP-203ENST00000554074 KRTAP19-5Q3LI72 72 aa2.39□□□□□ -2.03
SLIRP-203ENST00000554074 PP632Q6XCG6 107 aa2.39□□□□□ -2.03
SLIRP-203ENST00000554074 MT4P47944 62 aa2.37□□□□□ -2.03
SLIRP-203ENST00000554074 KRTAP5-10Q6L8G5 202 aa2.36□□□□□ -2.03
SLIRP-203ENST00000554074 MT1MQ8N339 61 aa2.36□□□□□ -2.03
SLIRP-203ENST00000554074 MT1LQ93083 61 aa2.35□□□□□ -2.03
SLIRP-203ENST00000554074 ROMO1P60602 79 aa2.34□□□□□ -2.03
SLIRP-203ENST00000554074 SPRR5A0A1B0GTR4 108 aa2.33□□□□□ -2.04
SLIRP-203ENST00000554074 LCE3AQ5TA76 89 aa2.31□□□□□ -2.04
SLIRP-203ENST00000554074 KRTAP5-4Q6L8H1 288 aa2.31□□□□□ -2.04
SLIRP-203ENST00000554074 BRK1Q8WUW1 75 aa2.3□□□□□ -2.04
SLIRP-203ENST00000554074 KRTAP5-7Q6L8G8 165 aa2.28□□□□□ -2.04
SLIRP-203ENST00000554074 KRTAP12-3P60328 96 aa2.26□□□□□ -2.05
SLIRP-203ENST00000554074 KRTAP4-3Q9BYR4 195 aa2.26□□□□□ -2.05
SLIRP-203ENST00000554074 KRTAP5-11Q6L8G4 156 aa2.22□□□□□ -2.05
SLIRP-203ENST00000554074 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.22□□□□□ -2.05
SLIRP-203ENST00000554074 PMAIP1Q13794 54 aa2.2□□□□□ -2.06
SLIRP-203ENST00000554074 PRO0628Q9UI54 55 aa2.2□□□□□ -2.06
SLIRP-203ENST00000554074 KRTAP5-5Q701N2 237 aaPredicted RBP2.18□□□□□ -2.06
SLIRP-203ENST00000554074 KRTAP20-2Q3LI61 65 aa2.16□□□□□ -2.06
SLIRP-203ENST00000554074 KRTAP12-4P60329 112 aa2.14□□□□□ -2.07
SLIRP-203ENST00000554074 LCE1EQ5T753 118 aa2.12□□□□□ -2.07
SLIRP-203ENST00000554074 AHNAKQ09666 5890 aaKnown RBP2.12□□□□□ -2.07
SLIRP-203ENST00000554074 LCE3CQ5T5A8 94 aa2.1□□□□□ -2.07
SLIRP-203ENST00000554074 SYNE1Q8NF91 8797 aaKnown RBP2.07□□□□□ -2.08
SLIRP-203ENST00000554074 KTN1-AS1Q86SY8 53 aa2.05□□□□□ -2.08
SLIRP-203ENST00000554074 MUC5ACP98088 5654 aa2.03□□□□□ -2.08
SLIRP-203ENST00000554074 MUC5BQ9HC84 5762 aaPredicted RBP2.02□□□□□ -2.09
SLIRP-203ENST00000554074 MT3P25713 68 aa2.02□□□□□ -2.09
SLIRP-203ENST00000554074 MT1AP04731 61 aa2.01□□□□□ -2.09
SLIRP-203ENST00000554074 KRTAP5-2Q701N4 177 aa2.01□□□□□ -2.09
SLIRP-203ENST00000554074 PRAC1Q96KF2 57 aa2.01□□□□□ -2.09
SLIRP-203ENST00000554074 SVIPQ8NHG7 77 aa2□□□□□ -2.09
SLIRP-203ENST00000554074 KRTAP6-1Q3LI64 71 aa1.98□□□□□ -2.09
SLIRP-203ENST00000554074 KRTAP5-8O75690 187 aa1.97□□□□□ -2.09
SLIRP-203ENST00000554074 KRTAP5-1Q6L8H4 278 aa1.93□□□□□ -2.1
SLIRP-203ENST00000554074 KRTAP9-6A8MVA2 160 aa1.92□□□□□ -2.1
SLIRP-203ENST00000554074 KRTAP6-2Q3LI66 62 aa1.9□□□□□ -2.11
SLIRP-203ENST00000554074 LCE1FQ5T754 118 aa1.88□□□□□ -2.11
SLIRP-203ENST00000554074 KRTAP4-4Q9BYR3 166 aa1.84□□□□□ -2.11
SLIRP-203ENST00000554074 A0A0A0MQY5 61 aa1.83□□□□□ -2.12
SLIRP-203ENST00000554074 OBSCNQ5VST9 7968 aa1.82□□□□□ -2.12
SLIRP-203ENST00000554074 LUZP6Q538Z0 58 aa1.78□□□□□ -2.12
SLIRP-203ENST00000554074 LCE3EQ5T5B0 92 aa1.63□□□□□ -2.15
SLIRP-203ENST00000554074 LCE1CQ5T751 118 aa1.6□□□□□ -2.15
SLIRP-203ENST00000554074 LCE1BQ5T7P3 118 aa1.6□□□□□ -2.15
SLIRP-203ENST00000554074 NDUFAF8A1L188 74 aa1.55□□□□□ -2.16
SLIRP-203ENST00000554074 LCE3DQ9BYE3 92 aa1.55□□□□□ -2.16
SLIRP-203ENST00000554074 PHGR1C9JFL3 82 aa1.42□□□□□ -2.18
SLIRP-203ENST00000554074 INE1O15225 51 aa1.33□□□□□ -2.2
SLIRP-203ENST00000554074 KRTAP21-2Q3LI59 83 aa1.32□□□□□ -2.2
SLIRP-203ENST00000554074 PRM1P04553 51 aa1.17□□□□□ -2.22
SLIRP-203ENST00000554074 MUC19Q7Z5P9 8384 aa1.16□□□□□ -2.22
SLIRP-203ENST00000554074 KRTAP21-1Q3LI58 79 aa1.04□□□□□ -2.24
SLIRP-203ENST00000554074 MUC16Q8WXI7 14507 aa0.81□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 7.3 ms