RNA–Protein interactions for RNA: ENST00000553807.1

XRCC3-205, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-205ENST00000553807 MT1LQ93083 61 aa7.28□□□□□ -1.24
XRCC3-205ENST00000553807 DSTQ03001 7570 aaKnown RBP7.27□□□□□ -1.25
XRCC3-205ENST00000553807 K7ERS5 55 aa7.26□□□□□ -1.25
XRCC3-205ENST00000553807 MT1MQ8N339 61 aa7.23□□□□□ -1.25
XRCC3-205ENST00000553807 KRTAP25-1Q3LHN0 102 aa7.15□□□□□ -1.26
XRCC3-205ENST00000553807 A6NED7 52 aa7.14□□□□□ -1.27
XRCC3-205ENST00000553807 KRTAP12-3P60328 96 aa7.14□□□□□ -1.27
XRCC3-205ENST00000553807 PCP4P48539 62 aa7.1□□□□□ -1.27
XRCC3-205ENST00000553807 KRTAP4-3Q9BYR4 195 aa7.07□□□□□ -1.28
XRCC3-205ENST00000553807 KRTAP4-9Q9BYQ8 210 aa7.03□□□□□ -1.28
XRCC3-205ENST00000553807 RPS28P62857 69 aaKnown RBP7.02□□□□□ -1.29
XRCC3-205ENST00000553807 KRTAP4-7Q9BYR0 210 aa6.96□□□□□ -1.3
XRCC3-205ENST00000553807 CDC42SE1Q9NRR8 79 aa6.9□□□□□ -1.3
XRCC3-205ENST00000553807 LCE1DQ5T752 114 aa6.87□□□□□ -1.31
XRCC3-205ENST00000553807 LCE4AQ5TA78 99 aa6.87□□□□□ -1.31
XRCC3-205ENST00000553807 MT4P47944 62 aa6.84□□□□□ -1.31
XRCC3-205ENST00000553807 KRTAP23-1A1A580 65 aa6.83□□□□□ -1.32
XRCC3-205ENST00000553807 HMCN1Q96RW7 5635 aa6.8□□□□□ -1.32
XRCC3-205ENST00000553807 GPR98Q8WXG9 6306 aa6.79□□□□□ -1.32
XRCC3-205ENST00000553807 ROMO1P60602 79 aa6.78□□□□□ -1.32
XRCC3-205ENST00000553807 KRTAP5-4Q6L8H1 288 aa6.76□□□□□ -1.33
XRCC3-205ENST00000553807 KRTAP15-1Q3LI76 137 aa6.71□□□□□ -1.34
XRCC3-205ENST00000553807 KRTAP19-4Q3LI73 84 aa6.65□□□□□ -1.34
XRCC3-205ENST00000553807 KRTAP4-6Q9BYQ5 205 aa6.63□□□□□ -1.35
XRCC3-205ENST00000553807 KRTAP5-5Q701N2 237 aaPredicted RBP6.59□□□□□ -1.35
XRCC3-205ENST00000553807 LOC100996750A0A140TA64 210 aa6.58□□□□□ -1.36
XRCC3-205ENST00000553807 LCE3CQ5T5A8 94 aa6.58□□□□□ -1.36
XRCC3-205ENST00000553807 AHNAK2Q8IVF2 5795 aa6.52□□□□□ -1.37
XRCC3-205ENST00000553807 KRTAP20-2Q3LI61 65 aa6.41□□□□□ -1.38
XRCC3-205ENST00000553807 KRTAP12-4P60329 112 aa6.4□□□□□ -1.38
XRCC3-205ENST00000553807 SPRR5A0A1B0GTR4 108 aa6.36□□□□□ -1.39
XRCC3-205ENST00000553807 SYNE1Q8NF91 8797 aaKnown RBP6.3□□□□□ -1.4
XRCC3-205ENST00000553807 KRTAP5-10Q6L8G5 202 aa6.28□□□□□ -1.4
XRCC3-205ENST00000553807 BRK1Q8WUW1 75 aa6.27□□□□□ -1.41
XRCC3-205ENST00000553807 KRTAP9-6A8MVA2 160 aa6.21□□□□□ -1.42
XRCC3-205ENST00000553807 MT1AP04731 61 aa6.2□□□□□ -1.42
XRCC3-205ENST00000553807 KRTAP5-3Q6L8H2 238 aa6.18□□□□□ -1.42
XRCC3-205ENST00000553807 KRTAP6-1Q3LI64 71 aa6.16□□□□□ -1.42
XRCC3-205ENST00000553807 KRTAP5-7Q6L8G8 165 aa6.01□□□□□ -1.45
XRCC3-205ENST00000553807 KRTAP5-2Q701N4 177 aa5.96□□□□□ -1.46
XRCC3-205ENST00000553807 KRTAP9-4Q9BYQ2 154 aa5.96□□□□□ -1.46
XRCC3-205ENST00000553807 PMAIP1Q13794 54 aa5.87□□□□□ -1.47
XRCC3-205ENST00000553807 KRTAP6-2Q3LI66 62 aa5.87□□□□□ -1.47
XRCC3-205ENST00000553807 KRTAP4-11Q9BYQ6 195 aa5.8□□□□□ -1.48
XRCC3-205ENST00000553807 PRAC1Q96KF2 57 aa5.68□□□□□ -1.5
XRCC3-205ENST00000553807 MT3P25713 68 aa5.65□□□□□ -1.5
XRCC3-205ENST00000553807 KRTAP5-8O75690 187 aa5.6□□□□□ -1.51
XRCC3-205ENST00000553807 OBSCNQ5VST9 7968 aa5.51□□□□□ -1.53
XRCC3-205ENST00000553807 PRO0628Q9UI54 55 aa5.5□□□□□ -1.53
XRCC3-205ENST00000553807 AHNAKQ09666 5890 aaKnown RBP5.34□□□□□ -1.56
XRCC3-205ENST00000553807 MUC5BQ9HC84 5762 aaPredicted RBP5.32□□□□□ -1.56
XRCC3-205ENST00000553807 KRTAP5-1Q6L8H4 278 aa5.31□□□□□ -1.56
XRCC3-205ENST00000553807 KRTAP9-9Q9BYP9 154 aa5.3□□□□□ -1.56
XRCC3-205ENST00000553807 MUC5ACP98088 5654 aa5.29□□□□□ -1.56
XRCC3-205ENST00000553807 KTN1-AS1Q86SY8 53 aa5.26□□□□□ -1.57
XRCC3-205ENST00000553807 LCE1EQ5T753 118 aa5.12□□□□□ -1.59
XRCC3-205ENST00000553807 SVIPQ8NHG7 77 aa5.11□□□□□ -1.59
XRCC3-205ENST00000553807 LCE1BQ5T7P3 118 aa4.89□□□□□ -1.63
XRCC3-205ENST00000553807 KRTAP4-2Q9BYR5 136 aa4.86□□□□□ -1.63
XRCC3-205ENST00000553807 LCE3DQ9BYE3 92 aa4.77□□□□□ -1.65
XRCC3-205ENST00000553807 LUZP6Q538Z0 58 aa4.76□□□□□ -1.65
XRCC3-205ENST00000553807 LCE1CQ5T751 118 aa4.76□□□□□ -1.65
XRCC3-205ENST00000553807 LCE3EQ5T5B0 92 aa4.51□□□□□ -1.69
XRCC3-205ENST00000553807 KRTAP4-12Q9BQ66 201 aa4.39□□□□□ -1.71
XRCC3-205ENST00000553807 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.34□□□□□ -1.71
XRCC3-205ENST00000553807 KRTAP5-11Q6L8G4 156 aa4.31□□□□□ -1.72
XRCC3-205ENST00000553807 LCE1FQ5T754 118 aa4.13□□□□□ -1.75
XRCC3-205ENST00000553807 KRTAP21-2Q3LI59 83 aa4.04□□□□□ -1.76
XRCC3-205ENST00000553807 NDUFAF8A1L188 74 aa3.91□□□□□ -1.78
XRCC3-205ENST00000553807 KRTAP4-4Q9BYR3 166 aa3.73□□□□□ -1.81
XRCC3-205ENST00000553807 PHGR1C9JFL3 82 aa3.72□□□□□ -1.81
XRCC3-205ENST00000553807 PRM1P04553 51 aa3.5□□□□□ -1.85
XRCC3-205ENST00000553807 MUC19Q7Z5P9 8384 aa3.41□□□□□ -1.86
XRCC3-205ENST00000553807 INE1O15225 51 aa3.1□□□□□ -1.91
XRCC3-205ENST00000553807 A0A0A0MQY5 61 aa3.09□□□□□ -1.91
XRCC3-205ENST00000553807 KRTAP21-1Q3LI58 79 aa2.77□□□□□ -1.97
XRCC3-205ENST00000553807 MUC16Q8WXI7 14507 aa2.42□□□□□ -2.02
XRCC3-205ENST00000553807 H3BS24 57 aa2.19□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 329.5 ms