RNA–Protein interactions for RNA: ENST00000553444.1

HNRNPC-206, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-206ENST00000553444 M0QZ58 72 aa4.57□□□□□ -1.68
HNRNPC-206ENST00000553444 PSPHP1O15172 72 aa4.57□□□□□ -1.68
HNRNPC-206ENST00000553444 P0C880 135 aa4.55□□□□□ -1.68
HNRNPC-206ENST00000553444 AHNAK2Q8IVF2 5795 aa4.55□□□□□ -1.68
HNRNPC-206ENST00000553444 LINC01554Q52M75 96 aa4.51□□□□□ -1.69
HNRNPC-206ENST00000553444 A0A1B0GU33 70 aa4.48□□□□□ -1.69
HNRNPC-206ENST00000553444 A6NED7 52 aa4.44□□□□□ -1.7
HNRNPC-206ENST00000553444 UQCR11O14957 56 aa4.44□□□□□ -1.7
HNRNPC-206ENST00000553444 KRTAP19-3Q7Z4W3 81 aa4.43□□□□□ -1.7
HNRNPC-206ENST00000553444 KRTAP19-7Q3SYF9 63 aa4.41□□□□□ -1.7
HNRNPC-206ENST00000553444 SPATA8Q6RVD6 105 aa4.41□□□□□ -1.7
HNRNPC-206ENST00000553444 KRTAP5-10Q6L8G5 202 aa4.4□□□□□ -1.71
HNRNPC-206ENST00000553444 MT1EP04732 61 aa4.39□□□□□ -1.71
HNRNPC-206ENST00000553444 MT4P47944 62 aa4.39□□□□□ -1.71
HNRNPC-206ENST00000553444 MIR22HGQ0VDD5 57 aa4.39□□□□□ -1.71
HNRNPC-206ENST00000553444 KRTAP13-4Q3LI77 160 aa4.39□□□□□ -1.71
HNRNPC-206ENST00000553444 A0A0D9SG42 100 aa4.35□□□□□ -1.71
HNRNPC-206ENST00000553444 A8MU10 97 aa4.34□□□□□ -1.71
HNRNPC-206ENST00000553444 BRK1Q8WUW1 75 aa4.33□□□□□ -1.72
HNRNPC-206ENST00000553444 CDC42SE1Q9NRR8 79 aa4.33□□□□□ -1.72
HNRNPC-206ENST00000553444 KRTAP5-7Q6L8G8 165 aa4.29□□□□□ -1.72
HNRNPC-206ENST00000553444 MT1GP13640 62 aa4.26□□□□□ -1.73
HNRNPC-206ENST00000553444 SPINT4Q6UDR6 99 aa4.26□□□□□ -1.73
HNRNPC-206ENST00000553444 KRTAP5-4Q6L8H1 288 aa4.25□□□□□ -1.73
HNRNPC-206ENST00000553444 K7ERS5 55 aa4.23□□□□□ -1.73
HNRNPC-206ENST00000553444 KRTAP12-1P59990 96 aa4.22□□□□□ -1.73
HNRNPC-206ENST00000553444 PP632Q6XCG6 107 aa4.22□□□□□ -1.73
HNRNPC-206ENST00000553444 MT1MQ8N339 61 aa4.2□□□□□ -1.74
HNRNPC-206ENST00000553444 KRTAP19-5Q3LI72 72 aa4.18□□□□□ -1.74
HNRNPC-206ENST00000553444 CAMK2N1Q7Z7J9 78 aa4.18□□□□□ -1.74
HNRNPC-206ENST00000553444 PRO0628Q9UI54 55 aa4.16□□□□□ -1.74
HNRNPC-206ENST00000553444 MT1LQ93083 61 aa4.12□□□□□ -1.75
HNRNPC-206ENST00000553444 KRTAP4-3Q9BYR4 195 aa4.12□□□□□ -1.75
HNRNPC-206ENST00000553444 SPRR5A0A1B0GTR4 108 aa4.09□□□□□ -1.75
HNRNPC-206ENST00000553444 PMAIP1Q13794 54 aa4.09□□□□□ -1.75
HNRNPC-206ENST00000553444 KRTAP20-2Q3LI61 65 aa4.03□□□□□ -1.76
HNRNPC-206ENST00000553444 ROMO1P60602 79 aa4.02□□□□□ -1.77
HNRNPC-206ENST00000553444 C10orf95Q9H7T3 257 aa4□□□□□ -1.77
HNRNPC-206ENST00000553444 TNP1P09430 55 aa3.92□□□□□ -1.78
HNRNPC-206ENST00000553444 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.91□□□□□ -1.78
HNRNPC-206ENST00000553444 KRTAP5-5Q701N2 237 aaPredicted RBP3.91□□□□□ -1.78
HNRNPC-206ENST00000553444 AHNAKQ09666 5890 aaKnown RBP3.91□□□□□ -1.78
HNRNPC-206ENST00000553444 KRTAP25-1Q3LHN0 102 aa3.89□□□□□ -1.79
HNRNPC-206ENST00000553444 KRTAP12-4P60329 112 aa3.88□□□□□ -1.79
HNRNPC-206ENST00000553444 LCE3AQ5TA76 89 aa3.88□□□□□ -1.79
HNRNPC-206ENST00000553444 KTN1-AS1Q86SY8 53 aa3.88□□□□□ -1.79
HNRNPC-206ENST00000553444 PRAC1Q96KF2 57 aa3.87□□□□□ -1.79
HNRNPC-206ENST00000553444 SYNE1Q8NF91 8797 aaKnown RBP3.87□□□□□ -1.79
HNRNPC-206ENST00000553444 MUC5BQ9HC84 5762 aaPredicted RBP3.83□□□□□ -1.8
HNRNPC-206ENST00000553444 MUC5ACP98088 5654 aa3.82□□□□□ -1.8
HNRNPC-206ENST00000553444 MT3P25713 68 aa3.74□□□□□ -1.81
HNRNPC-206ENST00000553444 KRTAP12-3P60328 96 aa3.72□□□□□ -1.81
HNRNPC-206ENST00000553444 KRTAP5-11Q6L8G4 156 aa3.68□□□□□ -1.82
HNRNPC-206ENST00000553444 KRTAP5-8O75690 187 aa3.67□□□□□ -1.82
HNRNPC-206ENST00000553444 NDUFAF8A1L188 74 aa3.66□□□□□ -1.82
HNRNPC-206ENST00000553444 KRTAP5-2Q701N4 177 aa3.65□□□□□ -1.83
HNRNPC-206ENST00000553444 OBSCNQ5VST9 7968 aa3.55□□□□□ -1.84
HNRNPC-206ENST00000553444 KRTAP6-1Q3LI64 71 aa3.51□□□□□ -1.85
HNRNPC-206ENST00000553444 MT1AP04731 61 aa3.5□□□□□ -1.85
HNRNPC-206ENST00000553444 KRTAP6-2Q3LI66 62 aa3.42□□□□□ -1.86
HNRNPC-206ENST00000553444 LCE1FQ5T754 118 aa3.41□□□□□ -1.86
HNRNPC-206ENST00000553444 LCE3CQ5T5A8 94 aa3.38□□□□□ -1.87
HNRNPC-206ENST00000553444 KRTAP5-1Q6L8H4 278 aa3.37□□□□□ -1.87
HNRNPC-206ENST00000553444 KRTAP4-4Q9BYR3 166 aa3.28□□□□□ -1.88
HNRNPC-206ENST00000553444 LCE1EQ5T753 118 aa3.27□□□□□ -1.89
HNRNPC-206ENST00000553444 KRTAP9-6A8MVA2 160 aa3.23□□□□□ -1.89
HNRNPC-206ENST00000553444 LUZP6Q538Z0 58 aa3.15□□□□□ -1.91
HNRNPC-206ENST00000553444 LCE3EQ5T5B0 92 aa2.92□□□□□ -1.94
HNRNPC-206ENST00000553444 LCE1BQ5T7P3 118 aa2.9□□□□□ -1.95
HNRNPC-206ENST00000553444 LCE1CQ5T751 118 aa2.83□□□□□ -1.96
HNRNPC-206ENST00000553444 PHGR1C9JFL3 82 aa2.57□□□□□ -2
HNRNPC-206ENST00000553444 LCE3DQ9BYE3 92 aa2.52□□□□□ -2.01
HNRNPC-206ENST00000553444 INE1O15225 51 aa2.48□□□□□ -2.01
HNRNPC-206ENST00000553444 KRTAP21-2Q3LI59 83 aa2.32□□□□□ -2.04
HNRNPC-206ENST00000553444 MUC19Q7Z5P9 8384 aa2.2□□□□□ -2.06
HNRNPC-206ENST00000553444 PRM1P04553 51 aa2.1□□□□□ -2.07
HNRNPC-206ENST00000553444 KRTAP21-1Q3LI58 79 aa1.97□□□□□ -2.09
HNRNPC-206ENST00000553444 MUC16Q8WXI7 14507 aa1.55□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 61.1 ms