RNA–Protein interactions for RNA: ENST00000553247.1

LINC02407-202, Transcript of long intergenic non-protein coding RNA 2407, humanhuman

TSL 3 BASIC

Gene LINC02407, Length 1,083 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02407-202ENST00000553247 LINC01558Q9Y6Z2 57 aa3.42□□□□□ -1.86
LINC02407-202ENST00000553247 SPTSSBQ8NFR3 76 aa3.41□□□□□ -1.86
LINC02407-202ENST00000553247 BRK1Q8WUW1 75 aa3.41□□□□□ -1.86
LINC02407-202ENST00000553247 PLAC4Q8WY50 150 aa3.4□□□□□ -1.87
LINC02407-202ENST00000553247 PRO2289Q9P1D8 64 aa3.4□□□□□ -1.87
LINC02407-202ENST00000553247 R4GN34 69 aa3.4□□□□□ -1.87
LINC02407-202ENST00000553247 MT1XP80297 61 aa3.39□□□□□ -1.87
LINC02407-202ENST00000553247 PSPHP1O15172 72 aa3.38□□□□□ -1.87
LINC02407-202ENST00000553247 M0QZ58 72 aa3.36□□□□□ -1.87
LINC02407-202ENST00000553247 A6NED7 52 aa3.35□□□□□ -1.87
LINC02407-202ENST00000553247 SEC61GP60059 68 aa3.35□□□□□ -1.87
LINC02407-202ENST00000553247 KRTAP12-2P59991 146 aa3.34□□□□□ -1.87
LINC02407-202ENST00000553247 A0A1B0GU69 56 aa3.33□□□□□ -1.88
LINC02407-202ENST00000553247 CDC42SE1Q9NRR8 79 aa3.33□□□□□ -1.88
LINC02407-202ENST00000553247 KRTAP2-1Q9BYU5 128 aa3.3□□□□□ -1.88
LINC02407-202ENST00000553247 UQCR11O14957 56 aa3.29□□□□□ -1.88
LINC02407-202ENST00000553247 LINC01554Q52M75 96 aa3.28□□□□□ -1.88
LINC02407-202ENST00000553247 PMAIP1Q13794 54 aa3.27□□□□□ -1.89
LINC02407-202ENST00000553247 SPRR2FQ96RM1 72 aa3.27□□□□□ -1.89
LINC02407-202ENST00000553247 KRTAP8-1Q8IUC2 63 aa3.26□□□□□ -1.89
LINC02407-202ENST00000553247 SPRR2EP22531 72 aa3.25□□□□□ -1.89
LINC02407-202ENST00000553247 SPRR2BP35325 72 aa3.25□□□□□ -1.89
LINC02407-202ENST00000553247 SPRR2AP35326 72 aa3.25□□□□□ -1.89
LINC02407-202ENST00000553247 SPATA8Q6RVD6 105 aa3.24□□□□□ -1.89
LINC02407-202ENST00000553247 MIR22HGQ0VDD5 57 aa3.23□□□□□ -1.89
LINC02407-202ENST00000553247 LCE3EQ5T5B0 92 aa3.21□□□□□ -1.9
LINC02407-202ENST00000553247 MUC19Q7Z5P9 8384 aa3.21□□□□□ -1.9
LINC02407-202ENST00000553247 KTN1-AS1Q86SY8 53 aa3.2□□□□□ -1.9
LINC02407-202ENST00000553247 KRTAP13-4Q3LI77 160 aa3.19□□□□□ -1.9
LINC02407-202ENST00000553247 A0A1B0GU33 70 aa3.17□□□□□ -1.9
LINC02407-202ENST00000553247 K7ERS5 55 aa3.17□□□□□ -1.9
LINC02407-202ENST00000553247 DSTQ03001 7570 aaKnown RBP3.17□□□□□ -1.9
LINC02407-202ENST00000553247 A0A0A0MQY5 61 aa3.13□□□□□ -1.91
LINC02407-202ENST00000553247 SPRR2DP22532 72 aa3.13□□□□□ -1.91
LINC02407-202ENST00000553247 A8MU10 97 aa3.11□□□□□ -1.91
LINC02407-202ENST00000553247 CAMK2N1Q7Z7J9 78 aa3.11□□□□□ -1.91
LINC02407-202ENST00000553247 HMCN1Q96RW7 5635 aa3.08□□□□□ -1.92
LINC02407-202ENST00000553247 A0A0D9SG42 100 aa3.05□□□□□ -1.92
LINC02407-202ENST00000553247 KRTAP19-7Q3SYF9 63 aa3.05□□□□□ -1.92
LINC02407-202ENST00000553247 KRTAP12-1P59990 96 aa3.04□□□□□ -1.92
LINC02407-202ENST00000553247 SPINT4Q6UDR6 99 aa3.02□□□□□ -1.93
LINC02407-202ENST00000553247 AHNAK2Q8IVF2 5795 aa3.02□□□□□ -1.93
LINC02407-202ENST00000553247 MT1EP04732 61 aa3.01□□□□□ -1.93
LINC02407-202ENST00000553247 KRTAP19-3Q7Z4W3 81 aa2.98□□□□□ -1.93
LINC02407-202ENST00000553247 ROMO1P60602 79 aa2.96□□□□□ -1.94
LINC02407-202ENST00000553247 MT1GP13640 62 aa2.94□□□□□ -1.94
LINC02407-202ENST00000553247 KRTAP19-5Q3LI72 72 aa2.94□□□□□ -1.94
LINC02407-202ENST00000553247 KRTAP5-10Q6L8G5 202 aa2.94□□□□□ -1.94
LINC02407-202ENST00000553247 KRTAP5-7Q6L8G8 165 aa2.93□□□□□ -1.94
LINC02407-202ENST00000553247 KRTAP25-1Q3LHN0 102 aa2.92□□□□□ -1.94
LINC02407-202ENST00000553247 C10orf95Q9H7T3 257 aa2.92□□□□□ -1.94
LINC02407-202ENST00000553247 PRAC1Q96KF2 57 aa2.91□□□□□ -1.94
LINC02407-202ENST00000553247 TNP1P09430 55 aa2.89□□□□□ -1.95
LINC02407-202ENST00000553247 PP632Q6XCG6 107 aa2.88□□□□□ -1.95
LINC02407-202ENST00000553247 MT1LQ93083 61 aa2.87□□□□□ -1.95
LINC02407-202ENST00000553247 MT1MQ8N339 61 aa2.86□□□□□ -1.95
LINC02407-202ENST00000553247 MT4P47944 62 aa2.84□□□□□ -1.95
LINC02407-202ENST00000553247 SPRR5A0A1B0GTR4 108 aa2.79□□□□□ -1.96
LINC02407-202ENST00000553247 KRTAP12-3P60328 96 aa2.78□□□□□ -1.96
LINC02407-202ENST00000553247 KRTAP21-2Q3LI59 83 aa2.72□□□□□ -1.97
LINC02407-202ENST00000553247 AHNAKQ09666 5890 aaKnown RBP2.58□□□□□ -2
LINC02407-202ENST00000553247 KRTAP12-4P60329 112 aa2.57□□□□□ -2
LINC02407-202ENST00000553247 KRTAP20-2Q3LI61 65 aa2.57□□□□□ -2
LINC02407-202ENST00000553247 LUZP6Q538Z0 58 aa2.55□□□□□ -2
LINC02407-202ENST00000553247 SYNE1Q8NF91 8797 aaKnown RBP2.54□□□□□ -2
LINC02407-202ENST00000553247 MUC5ACP98088 5654 aa2.54□□□□□ -2
LINC02407-202ENST00000553247 MUC5BQ9HC84 5762 aaPredicted RBP2.5□□□□□ -2.01
LINC02407-202ENST00000553247 NDUFAF8A1L188 74 aa2.48□□□□□ -2.01
LINC02407-202ENST00000553247 MT1AP04731 61 aa2.45□□□□□ -2.02
LINC02407-202ENST00000553247 KRTAP6-1Q3LI64 71 aa2.42□□□□□ -2.02
LINC02407-202ENST00000553247 KRTAP6-2Q3LI66 62 aa2.31□□□□□ -2.04
LINC02407-202ENST00000553247 INE1O15225 51 aa2.18□□□□□ -2.06
LINC02407-202ENST00000553247 LCE3DQ9BYE3 92 aa2.15□□□□□ -2.07
LINC02407-202ENST00000553247 PHGR1C9JFL3 82 aa1.71□□□□□ -2.14
LINC02407-202ENST00000553247 PRM1P04553 51 aa1.51□□□□□ -2.17
LINC02407-202ENST00000553247 KRTAP21-1Q3LI58 79 aa1.24□□□□□ -2.21
LINC02407-202ENST00000553247 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 152.8 ms