RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 Q1T7F1 81 aa5.7□□□□□ -1.5
CDK4-215ENST00000553237 PP632Q6XCG6 107 aa5.68□□□□□ -1.5
CDK4-215ENST00000553237 LCE3AQ5TA76 89 aa5.67□□□□□ -1.5
CDK4-215ENST00000553237 MT1MQ8N339 61 aa5.65□□□□□ -1.5
CDK4-215ENST00000553237 MT1LQ93083 61 aa5.65□□□□□ -1.5
CDK4-215ENST00000553237 K7ERS5 55 aa5.58□□□□□ -1.52
CDK4-215ENST00000553237 LCE1DQ5T752 114 aa5.56□□□□□ -1.52
CDK4-215ENST00000553237 KRTAP4-3Q9BYR4 195 aa5.55□□□□□ -1.52
CDK4-215ENST00000553237 RPS28P62857 69 aaKnown RBP5.54□□□□□ -1.52
CDK4-215ENST00000553237 GPR98Q8WXG9 6306 aa5.53□□□□□ -1.52
CDK4-215ENST00000553237 A6NED7 52 aa5.52□□□□□ -1.53
CDK4-215ENST00000553237 MT4P47944 62 aa5.51□□□□□ -1.53
CDK4-215ENST00000553237 LCE4AQ5TA78 99 aa5.51□□□□□ -1.53
CDK4-215ENST00000553237 KRTAP25-1Q3LHN0 102 aa5.48□□□□□ -1.53
CDK4-215ENST00000553237 KRTAP12-3P60328 96 aa5.45□□□□□ -1.54
CDK4-215ENST00000553237 HMCN1Q96RW7 5635 aa5.42□□□□□ -1.54
CDK4-215ENST00000553237 KRTAP4-7Q9BYR0 210 aa5.41□□□□□ -1.54
CDK4-215ENST00000553237 KRTAP5-4Q6L8H1 288 aa5.39□□□□□ -1.55
CDK4-215ENST00000553237 KRTAP4-6Q9BYQ5 205 aa5.34□□□□□ -1.55
CDK4-215ENST00000553237 CDC42SE1Q9NRR8 79 aa5.31□□□□□ -1.56
CDK4-215ENST00000553237 KRTAP23-1A1A580 65 aa5.27□□□□□ -1.57
CDK4-215ENST00000553237 AHNAK2Q8IVF2 5795 aa5.25□□□□□ -1.57
CDK4-215ENST00000553237 ROMO1P60602 79 aa5.24□□□□□ -1.57
CDK4-215ENST00000553237 KRTAP5-10Q6L8G5 202 aa5.17□□□□□ -1.58
CDK4-215ENST00000553237 KRTAP5-5Q701N2 237 aaPredicted RBP5.16□□□□□ -1.58
CDK4-215ENST00000553237 KRTAP15-1Q3LI76 137 aa5.14□□□□□ -1.59
CDK4-215ENST00000553237 LOC100996750A0A140TA64 210 aa5.13□□□□□ -1.59
CDK4-215ENST00000553237 KRTAP20-2Q3LI61 65 aa5.12□□□□□ -1.59
CDK4-215ENST00000553237 KRTAP19-4Q3LI73 84 aa5.12□□□□□ -1.59
CDK4-215ENST00000553237 KRTAP12-4P60329 112 aa5.06□□□□□ -1.6
CDK4-215ENST00000553237 KRTAP5-3Q6L8H2 238 aa5.06□□□□□ -1.6
CDK4-215ENST00000553237 SPRR5A0A1B0GTR4 108 aa5.05□□□□□ -1.6
CDK4-215ENST00000553237 SYNE1Q8NF91 8797 aaKnown RBP5.03□□□□□ -1.6
CDK4-215ENST00000553237 LCE3CQ5T5A8 94 aa5.03□□□□□ -1.6
CDK4-215ENST00000553237 KRTAP5-7Q6L8G8 165 aa4.97□□□□□ -1.61
CDK4-215ENST00000553237 BRK1Q8WUW1 75 aa4.89□□□□□ -1.63
CDK4-215ENST00000553237 MT1AP04731 61 aa4.8□□□□□ -1.64
CDK4-215ENST00000553237 KRTAP6-1Q3LI64 71 aa4.8□□□□□ -1.64
CDK4-215ENST00000553237 KRTAP9-6A8MVA2 160 aa4.75□□□□□ -1.65
CDK4-215ENST00000553237 PRO0628Q9UI54 55 aa4.75□□□□□ -1.65
CDK4-215ENST00000553237 KRTAP5-2Q701N4 177 aa4.71□□□□□ -1.66
CDK4-215ENST00000553237 KRTAP4-11Q9BYQ6 195 aa4.69□□□□□ -1.66
CDK4-215ENST00000553237 KRTAP9-4Q9BYQ2 154 aa4.65□□□□□ -1.67
CDK4-215ENST00000553237 PMAIP1Q13794 54 aa4.61□□□□□ -1.67
CDK4-215ENST00000553237 KRTAP6-2Q3LI66 62 aa4.59□□□□□ -1.67
CDK4-215ENST00000553237 KRTAP5-8O75690 187 aa4.53□□□□□ -1.68
CDK4-215ENST00000553237 SVIPQ8NHG7 77 aa4.45□□□□□ -1.7
CDK4-215ENST00000553237 OBSCNQ5VST9 7968 aa4.43□□□□□ -1.7
CDK4-215ENST00000553237 PRAC1Q96KF2 57 aa4.42□□□□□ -1.7
CDK4-215ENST00000553237 MT3P25713 68 aa4.4□□□□□ -1.71
CDK4-215ENST00000553237 KTN1-AS1Q86SY8 53 aa4.39□□□□□ -1.71
CDK4-215ENST00000553237 MUC5BQ9HC84 5762 aaPredicted RBP4.34□□□□□ -1.72
CDK4-215ENST00000553237 AHNAKQ09666 5890 aaKnown RBP4.32□□□□□ -1.72
CDK4-215ENST00000553237 MUC5ACP98088 5654 aa4.31□□□□□ -1.72
CDK4-215ENST00000553237 KRTAP9-9Q9BYP9 154 aa4.31□□□□□ -1.72
CDK4-215ENST00000553237 KRTAP5-1Q6L8H4 278 aa4.25□□□□□ -1.73
CDK4-215ENST00000553237 LCE1EQ5T753 118 aa4.02□□□□□ -1.77
CDK4-215ENST00000553237 LCE1BQ5T7P3 118 aa3.86□□□□□ -1.79
CDK4-215ENST00000553237 KRTAP4-2Q9BYR5 136 aa3.84□□□□□ -1.79
CDK4-215ENST00000553237 LCE1CQ5T751 118 aa3.74□□□□□ -1.81
CDK4-215ENST00000553237 LUZP6Q538Z0 58 aa3.7□□□□□ -1.82
CDK4-215ENST00000553237 LCE3DQ9BYE3 92 aa3.66□□□□□ -1.82
CDK4-215ENST00000553237 KRTAP4-12Q9BQ66 201 aa3.55□□□□□ -1.84
CDK4-215ENST00000553237 LCE3EQ5T5B0 92 aa3.46□□□□□ -1.86
CDK4-215ENST00000553237 NDUFAF8A1L188 74 aa3.4□□□□□ -1.87
CDK4-215ENST00000553237 KRTAP5-11Q6L8G4 156 aa3.39□□□□□ -1.87
CDK4-215ENST00000553237 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.37□□□□□ -1.87
CDK4-215ENST00000553237 LCE1FQ5T754 118 aa3.3□□□□□ -1.88
CDK4-215ENST00000553237 KRTAP21-2Q3LI59 83 aa3.15□□□□□ -1.91
CDK4-215ENST00000553237 A0A0A0MQY5 61 aa3.05□□□□□ -1.92
CDK4-215ENST00000553237 H3BS24 57 aa3.05□□□□□ -1.92
CDK4-215ENST00000553237 PHGR1C9JFL3 82 aa3.03□□□□□ -1.92
CDK4-215ENST00000553237 KRTAP4-4Q9BYR3 166 aa2.95□□□□□ -1.94
CDK4-215ENST00000553237 INE1O15225 51 aa2.86□□□□□ -1.95
CDK4-215ENST00000553237 MUC19Q7Z5P9 8384 aa2.74□□□□□ -1.97
CDK4-215ENST00000553237 PRM1P04553 51 aa2.69□□□□□ -1.98
CDK4-215ENST00000553237 KRTAP21-1Q3LI58 79 aa2.29□□□□□ -2.04
CDK4-215ENST00000553237 MUC16Q8WXI7 14507 aa2.01□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 98 ms