RNA–Protein interactions for RNA: ENST00000552810.5

CEP290-207, Transcript of centrosomal protein 290, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CEP290, Length 7,948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-207ENST00000552810 PKHD1L1Q86WI1 4243 aa2.27□□□□□ -2.05
CEP290-207ENST00000552810 BIRC6Q9NR09 4857 aa2.27□□□□□ -2.05
CEP290-207ENST00000552810 RNF213Q63HN8 5207 aa2.27□□□□□ -2.05
CEP290-207ENST00000552810 LRP1Q07954 4544 aaKnown RBP2.26□□□□□ -2.05
CEP290-207ENST00000552810 KRTAP19-7Q3SYF9 63 aa2.26□□□□□ -2.05
CEP290-207ENST00000552810 KRTAP19-3Q7Z4W3 81 aa2.25□□□□□ -2.05
CEP290-207ENST00000552810 HERC1Q15751 4861 aa2.25□□□□□ -2.05
CEP290-207ENST00000552810 UBR4Q5T4S7 5183 aa2.24□□□□□ -2.05
CEP290-207ENST00000552810 FLGP20930 4061 aaPredicted RBP2.24□□□□□ -2.05
CEP290-207ENST00000552810 HERC2O95714 4834 aa2.24□□□□□ -2.05
CEP290-207ENST00000552810 KRTAP9-8Q9BYQ0 159 aa2.23□□□□□ -2.05
CEP290-207ENST00000552810 HSPG2P98160 4391 aa2.23□□□□□ -2.05
CEP290-207ENST00000552810 KRTAP6-2Q3LI66 62 aa2.22□□□□□ -2.05
CEP290-207ENST00000552810 KRTAP20-2Q3LI61 65 aa2.21□□□□□ -2.06
CEP290-207ENST00000552810 KRTAP20-1Q3LI63 56 aa2.21□□□□□ -2.06
CEP290-207ENST00000552810 MT1EP04732 61 aa2.21□□□□□ -2.06
CEP290-207ENST00000552810 MT1MQ8N339 61 aa2.2□□□□□ -2.06
CEP290-207ENST00000552810 FAT4Q6V0I7 4981 aa2.19□□□□□ -2.06
CEP290-207ENST00000552810 KRTAP9-3Q9BYQ3 159 aa2.19□□□□□ -2.06
CEP290-207ENST00000552810 PKHD1P08F94 4074 aa2.19□□□□□ -2.06
CEP290-207ENST00000552810 KRTAP19-6Q3LI70 58 aa2.16□□□□□ -2.06
CEP290-207ENST00000552810 TNXBP22105 4242 aa2.15□□□□□ -2.06
CEP290-207ENST00000552810 MUC2Q02817 5179 aa2.15□□□□□ -2.07
CEP290-207ENST00000552810 KRTAP9-9Q9BYP9 154 aa2.12□□□□□ -2.07
CEP290-207ENST00000552810 FSIP2Q5CZC0 6907 aa2.12□□□□□ -2.07
CEP290-207ENST00000552810 KRTAP4-11Q9BYQ6 195 aa2.1□□□□□ -2.07
CEP290-207ENST00000552810 KRTAP6-1Q3LI64 71 aa2.09□□□□□ -2.08
CEP290-207ENST00000552810 KRTAP2-3P0C7H8 128 aa2.07□□□□□ -2.08
CEP290-207ENST00000552810 KRTAP2-4Q9BYR9 128 aa2.07□□□□□ -2.08
CEP290-207ENST00000552810 KRTAP2-1Q9BYU5 128 aa2.07□□□□□ -2.08
CEP290-207ENST00000552810 KRTAP9-4Q9BYQ2 154 aa2.06□□□□□ -2.08
CEP290-207ENST00000552810 KRTAP2-2Q9BYT5 123 aa2.05□□□□□ -2.08
CEP290-207ENST00000552810 KRTAP4-4Q9BYR3 166 aa2.05□□□□□ -2.08
CEP290-207ENST00000552810 LRP2P98164 4655 aa2.05□□□□□ -2.08
CEP290-207ENST00000552810 MUC17Q685J3 4493 aa2.05□□□□□ -2.08
CEP290-207ENST00000552810 OBSCNQ5VST9 7968 aa2.02□□□□□ -2.09
CEP290-207ENST00000552810 KRTAP9-2Q9BYQ4 174 aa2.01□□□□□ -2.09
CEP290-207ENST00000552810 KRTAP9-6A8MVA2 160 aa2□□□□□ -2.09
CEP290-207ENST00000552810 SYNE1Q8NF91 8797 aaKnown RBP2□□□□□ -2.09
CEP290-207ENST00000552810 USH2AO75445 5202 aa1.98□□□□□ -2.09
CEP290-207ENST00000552810 MT1AP04731 61 aa1.96□□□□□ -2.1
CEP290-207ENST00000552810 KRTAP4-6Q9BYQ5 205 aa1.95□□□□□ -2.1
CEP290-207ENST00000552810 KRTAP4-12Q9BQ66 201 aa1.94□□□□□ -2.1
CEP290-207ENST00000552810 KRTAP4-2Q9BYR5 136 aa1.94□□□□□ -2.1
CEP290-207ENST00000552810 KRTAP19-2Q3LHN2 52 aa1.93□□□□□ -2.1
CEP290-207ENST00000552810 SSPOA2VEC9 5147 aa1.92□□□□□ -2.1
CEP290-207ENST00000552810 DSTQ03001 7570 aaKnown RBP1.86□□□□□ -2.11
CEP290-207ENST00000552810 KMT2DO14686 5537 aa1.79□□□□□ -2.12
CEP290-207ENST00000552810 FCGBPQ9Y6R7 5405 aaPredicted RBP1.77□□□□□ -2.13
CEP290-207ENST00000552810 MUC19Q7Z5P9 8384 aa1.73□□□□□ -2.13
CEP290-207ENST00000552810 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.71□□□□□ -2.14
CEP290-207ENST00000552810 GPR98Q8WXG9 6306 aa1.66□□□□□ -2.14
CEP290-207ENST00000552810 MACF1Q9UPN3 7388 aaKnown RBP1.66□□□□□ -2.14
CEP290-207ENST00000552810 MUC5BQ9HC84 5762 aaPredicted RBP1.59□□□□□ -2.15
CEP290-207ENST00000552810 KRTAP6-3Q3LI67 103 aa1.57□□□□□ -2.16
CEP290-207ENST00000552810 MUC12Q9UKN1 5478 aa1.56□□□□□ -2.16
CEP290-207ENST00000552810 KRTAP5-5Q701N2 237 aaPredicted RBP1.5□□□□□ -2.17
CEP290-207ENST00000552810 MDN1Q9NU22 5596 aa1.49□□□□□ -2.17
CEP290-207ENST00000552810 PHGR1C9JFL3 82 aa1.47□□□□□ -2.17
CEP290-207ENST00000552810 AHNAKQ09666 5890 aaKnown RBP1.47□□□□□ -2.17
CEP290-207ENST00000552810 NEBP20929 6669 aa1.45□□□□□ -2.18
CEP290-207ENST00000552810 KRTAP5-4Q6L8H1 288 aa1.4□□□□□ -2.19
CEP290-207ENST00000552810 HMCN1Q96RW7 5635 aa1.34□□□□□ -2.2
CEP290-207ENST00000552810 KRTAP5-2Q701N4 177 aa1.28□□□□□ -2.2
CEP290-207ENST00000552810 AHNAK2Q8IVF2 5795 aa1.26□□□□□ -2.21
CEP290-207ENST00000552810 KRTAP5-8O75690 187 aa1.23□□□□□ -2.21
CEP290-207ENST00000552810 KRTAP5-3Q6L8H2 238 aa1.22□□□□□ -2.21
CEP290-207ENST00000552810 MUC5ACP98088 5654 aa1.19□□□□□ -2.22
CEP290-207ENST00000552810 KRTAP21-1Q3LI58 79 aa1.11□□□□□ -2.23
CEP290-207ENST00000552810 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.11□□□□□ -2.23
CEP290-207ENST00000552810 KRTAP5-10Q6L8G5 202 aa1.02□□□□□ -2.25
CEP290-207ENST00000552810 KRTAP5-1Q6L8H4 278 aa1.01□□□□□ -2.25
CEP290-207ENST00000552810 KRTAP5-9P26371 169 aa1□□□□□ -2.25
CEP290-207ENST00000552810 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
CEP290-207ENST00000552810 KRTAP5-11Q6L8G4 156 aa0.84□□□□□ -2.28
CEP290-207ENST00000552810 KRTAP5-7Q6L8G8 165 aa0.81□□□□□ -2.28
CEP290-207ENST00000552810 KRTAP21-2Q3LI59 83 aa0.78□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 90.3 ms