RNA–Protein interactions for RNA: ENST00000551549.1

GCN1-208, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 2

Gene GCN1, Length 258 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-208ENST00000551549 CCDC179H3BU77 68 aa3.39□□□□□ -1.87
GCN1-208ENST00000551549 LCE4AQ5TA78 99 aa3.39□□□□□ -1.87
GCN1-208ENST00000551549 PRR15LQ9BU68 103 aa3.36□□□□□ -1.87
GCN1-208ENST00000551549 KRTAP5-4Q6L8H1 288 aa3.33□□□□□ -1.88
GCN1-208ENST00000551549 LINC01558Q9Y6Z2 57 aa3.33□□□□□ -1.88
GCN1-208ENST00000551549 ATP5EP56381 51 aaPredicted RBP3.32□□□□□ -1.88
GCN1-208ENST00000551549 KRTAP4-7Q9BYR0 210 aa3.31□□□□□ -1.88
GCN1-208ENST00000551549 KRTAP12-3P60328 96 aa3.3□□□□□ -1.88
GCN1-208ENST00000551549 KRTAP4-6Q9BYQ5 205 aa3.3□□□□□ -1.88
GCN1-208ENST00000551549 UQCR11O14957 56 aa3.25□□□□□ -1.89
GCN1-208ENST00000551549 TMEM258P61165 79 aa3.22□□□□□ -1.89
GCN1-208ENST00000551549 KRTAP5-10Q6L8G5 202 aa3.22□□□□□ -1.89
GCN1-208ENST00000551549 SYNE1Q8NF91 8797 aaKnown RBP3.2□□□□□ -1.9
GCN1-208ENST00000551549 MIR22HGQ0VDD5 57 aa3.18□□□□□ -1.9
GCN1-208ENST00000551549 KRTAP25-1Q3LHN0 102 aa3.18□□□□□ -1.9
GCN1-208ENST00000551549 KRTAP5-5Q701N2 237 aaPredicted RBP3.18□□□□□ -1.9
GCN1-208ENST00000551549 LOC100996750A0A140TA64 210 aa3.15□□□□□ -1.91
GCN1-208ENST00000551549 KRTAP20-2Q3LI61 65 aa3.15□□□□□ -1.91
GCN1-208ENST00000551549 KRTAP5-3Q6L8H2 238 aa3.12□□□□□ -1.91
GCN1-208ENST00000551549 SPRR5A0A1B0GTR4 108 aa3.11□□□□□ -1.91
GCN1-208ENST00000551549 K7ERS5 55 aa3.11□□□□□ -1.91
GCN1-208ENST00000551549 SVIPQ8NHG7 77 aa3.11□□□□□ -1.91
GCN1-208ENST00000551549 PSPHP1O15172 72 aa3.1□□□□□ -1.91
GCN1-208ENST00000551549 KRTAP12-4P60329 112 aa3.1□□□□□ -1.91
GCN1-208ENST00000551549 KRTAP5-7Q6L8G8 165 aa3.09□□□□□ -1.91
GCN1-208ENST00000551549 KRTAP15-1Q3LI76 137 aa3.06□□□□□ -1.92
GCN1-208ENST00000551549 KRTAP23-1A1A580 65 aa3.05□□□□□ -1.92
GCN1-208ENST00000551549 Q1T7F1 81 aa3.05□□□□□ -1.92
GCN1-208ENST00000551549 KRTAP19-4Q3LI73 84 aa3.05□□□□□ -1.92
GCN1-208ENST00000551549 V9GYY9 64 aa3.05□□□□□ -1.92
GCN1-208ENST00000551549 LCE3CQ5T5A8 94 aa3.04□□□□□ -1.92
GCN1-208ENST00000551549 A6NED7 52 aa2.97□□□□□ -1.93
GCN1-208ENST00000551549 CDC42SE1Q9NRR8 79 aa2.95□□□□□ -1.94
GCN1-208ENST00000551549 KRTAP6-1Q3LI64 71 aa2.94□□□□□ -1.94
GCN1-208ENST00000551549 MT1AP04731 61 aa2.93□□□□□ -1.94
GCN1-208ENST00000551549 AHNAKQ09666 5890 aaKnown RBP2.92□□□□□ -1.94
GCN1-208ENST00000551549 ROMO1P60602 79 aa2.92□□□□□ -1.94
GCN1-208ENST00000551549 KRTAP5-2Q701N4 177 aa2.91□□□□□ -1.94
GCN1-208ENST00000551549 MUC5BQ9HC84 5762 aaPredicted RBP2.9□□□□□ -1.95
GCN1-208ENST00000551549 KRTAP9-6A8MVA2 160 aa2.89□□□□□ -1.95
GCN1-208ENST00000551549 KRTAP4-11Q9BYQ6 195 aa2.89□□□□□ -1.95
GCN1-208ENST00000551549 RPS28P62857 69 aaKnown RBP2.88□□□□□ -1.95
GCN1-208ENST00000551549 OBSCNQ5VST9 7968 aa2.87□□□□□ -1.95
GCN1-208ENST00000551549 KRTAP9-4Q9BYQ2 154 aa2.85□□□□□ -1.95
GCN1-208ENST00000551549 KRTAP6-2Q3LI66 62 aa2.83□□□□□ -1.96
GCN1-208ENST00000551549 MUC5ACP98088 5654 aa2.82□□□□□ -1.96
GCN1-208ENST00000551549 KRTAP5-8O75690 187 aa2.8□□□□□ -1.96
GCN1-208ENST00000551549 H3BS24 57 aa2.73□□□□□ -1.97
GCN1-208ENST00000551549 MT3P25713 68 aa2.69□□□□□ -1.98
GCN1-208ENST00000551549 PCP4P48539 62 aa2.68□□□□□ -1.98
GCN1-208ENST00000551549 KRTAP9-9Q9BYP9 154 aa2.65□□□□□ -1.99
GCN1-208ENST00000551549 KRTAP5-1Q6L8H4 278 aa2.62□□□□□ -1.99
GCN1-208ENST00000551549 LCE1EQ5T753 118 aa2.47□□□□□ -2.01
GCN1-208ENST00000551549 BRK1Q8WUW1 75 aa2.45□□□□□ -2.02
GCN1-208ENST00000551549 A0A0A0MQY5 61 aa2.37□□□□□ -2.03
GCN1-208ENST00000551549 LCE1BQ5T7P3 118 aa2.36□□□□□ -2.03
GCN1-208ENST00000551549 KRTAP4-2Q9BYR5 136 aa2.36□□□□□ -2.03
GCN1-208ENST00000551549 LCE1CQ5T751 118 aa2.3□□□□□ -2.04
GCN1-208ENST00000551549 PMAIP1Q13794 54 aa2.29□□□□□ -2.04
GCN1-208ENST00000551549 PRAC1Q96KF2 57 aa2.27□□□□□ -2.05
GCN1-208ENST00000551549 KRTAP4-12Q9BQ66 201 aa2.19□□□□□ -2.06
GCN1-208ENST00000551549 LCE3DQ9BYE3 92 aa2.17□□□□□ -2.06
GCN1-208ENST00000551549 KRTAP5-11Q6L8G4 156 aa2.08□□□□□ -2.08
GCN1-208ENST00000551549 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.08□□□□□ -2.08
GCN1-208ENST00000551549 LCE1FQ5T754 118 aa2.03□□□□□ -2.08
GCN1-208ENST00000551549 LCE3EQ5T5B0 92 aa2.02□□□□□ -2.09
GCN1-208ENST00000551549 PRO0628Q9UI54 55 aa2.01□□□□□ -2.09
GCN1-208ENST00000551549 KTN1-AS1Q86SY8 53 aa1.96□□□□□ -2.1
GCN1-208ENST00000551549 KRTAP21-2Q3LI59 83 aa1.94□□□□□ -2.1
GCN1-208ENST00000551549 LUZP6Q538Z0 58 aa1.89□□□□□ -2.11
GCN1-208ENST00000551549 PHGR1C9JFL3 82 aa1.87□□□□□ -2.11
GCN1-208ENST00000551549 NDUFAF8A1L188 74 aa1.81□□□□□ -2.12
GCN1-208ENST00000551549 KRTAP4-4Q9BYR3 166 aa1.81□□□□□ -2.12
GCN1-208ENST00000551549 MUC19Q7Z5P9 8384 aa1.78□□□□□ -2.12
GCN1-208ENST00000551549 PRM1P04553 51 aa1.5□□□□□ -2.17
GCN1-208ENST00000551549 KRTAP21-1Q3LI58 79 aa1.41□□□□□ -2.18
GCN1-208ENST00000551549 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
GCN1-208ENST00000551549 INE1O15225 51 aa1.17□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 10.8 ms