RNA–Protein interactions for RNA: ENST00000550869.5

ERBB3-216, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 4

Gene ERBB3, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-216ENST00000550869 KRTAP4-8A0A0G2JLE6 195 aa4.68□□□□□ -1.66
ERBB3-216ENST00000550869 KRTAP4-8Q9BYQ9 185 aa4.68□□□□□ -1.66
ERBB3-216ENST00000550869 KRTAP23-1A1A580 65 aa4.64□□□□□ -1.67
ERBB3-216ENST00000550869 LCE3BQ5TA77 95 aa4.61□□□□□ -1.67
ERBB3-216ENST00000550869 LCE3AQ5TA76 89 aa4.59□□□□□ -1.67
ERBB3-216ENST00000550869 KRTAP19-7Q3SYF9 63 aa4.52□□□□□ -1.69
ERBB3-216ENST00000550869 PP632Q6XCG6 107 aa4.52□□□□□ -1.69
ERBB3-216ENST00000550869 KRTAP19-5Q3LI72 72 aa4.48□□□□□ -1.69
ERBB3-216ENST00000550869 KTN1-AS1Q86SY8 53 aa4.45□□□□□ -1.7
ERBB3-216ENST00000550869 MT1EP04732 61 aa4.43□□□□□ -1.7
ERBB3-216ENST00000550869 KRTAP12-3P60328 96 aa4.43□□□□□ -1.7
ERBB3-216ENST00000550869 PRAC1Q96KF2 57 aa4.42□□□□□ -1.7
ERBB3-216ENST00000550869 LCE5AQ5TCM9 118 aa4.37□□□□□ -1.71
ERBB3-216ENST00000550869 DSTQ03001 7570 aaKnown RBP4.36□□□□□ -1.71
ERBB3-216ENST00000550869 KRTAP19-3Q7Z4W3 81 aa4.32□□□□□ -1.72
ERBB3-216ENST00000550869 MT1LQ93083 61 aa4.31□□□□□ -1.72
ERBB3-216ENST00000550869 KRTAP15-1Q3LI76 137 aa4.3□□□□□ -1.72
ERBB3-216ENST00000550869 KRTAP4-9Q9BYQ8 210 aa4.29□□□□□ -1.72
ERBB3-216ENST00000550869 MT1GP13640 62 aa4.26□□□□□ -1.73
ERBB3-216ENST00000550869 KRTAP19-4Q3LI73 84 aa4.26□□□□□ -1.73
ERBB3-216ENST00000550869 LCE1DQ5T752 114 aa4.2□□□□□ -1.74
ERBB3-216ENST00000550869 LCE4AQ5TA78 99 aa4.19□□□□□ -1.74
ERBB3-216ENST00000550869 MT1MQ8N339 61 aa4.18□□□□□ -1.74
ERBB3-216ENST00000550869 HMCN1Q96RW7 5635 aa4.15□□□□□ -1.75
ERBB3-216ENST00000550869 LCE3CQ5T5A8 94 aa4.13□□□□□ -1.75
ERBB3-216ENST00000550869 MT4P47944 62 aa4.12□□□□□ -1.75
ERBB3-216ENST00000550869 KRTAP4-7Q9BYR0 210 aa4.12□□□□□ -1.75
ERBB3-216ENST00000550869 SVIPQ8NHG7 77 aa4.11□□□□□ -1.75
ERBB3-216ENST00000550869 KRTAP5-4Q6L8H1 288 aa4.06□□□□□ -1.76
ERBB3-216ENST00000550869 KRTAP4-3Q9BYR4 195 aa4.06□□□□□ -1.76
ERBB3-216ENST00000550869 AHNAK2Q8IVF2 5795 aa4.04□□□□□ -1.76
ERBB3-216ENST00000550869 KRTAP5-10Q6L8G5 202 aa4.03□□□□□ -1.76
ERBB3-216ENST00000550869 SPRR5A0A1B0GTR4 108 aa3.97□□□□□ -1.77
ERBB3-216ENST00000550869 KRTAP4-6Q9BYQ5 205 aa3.97□□□□□ -1.77
ERBB3-216ENST00000550869 KRTAP9-6A8MVA2 160 aa3.92□□□□□ -1.78
ERBB3-216ENST00000550869 KRTAP5-7Q6L8G8 165 aa3.91□□□□□ -1.78
ERBB3-216ENST00000550869 KRTAP5-3Q6L8H2 238 aa3.88□□□□□ -1.79
ERBB3-216ENST00000550869 LOC100996750A0A140TA64 210 aa3.87□□□□□ -1.79
ERBB3-216ENST00000550869 KRTAP5-5Q701N2 237 aaPredicted RBP3.84□□□□□ -1.79
ERBB3-216ENST00000550869 KRTAP20-2Q3LI61 65 aa3.83□□□□□ -1.8
ERBB3-216ENST00000550869 KRTAP12-4P60329 112 aa3.78□□□□□ -1.8
ERBB3-216ENST00000550869 MT1AP04731 61 aa3.68□□□□□ -1.82
ERBB3-216ENST00000550869 AHNAKQ09666 5890 aaKnown RBP3.65□□□□□ -1.82
ERBB3-216ENST00000550869 KRTAP6-1Q3LI64 71 aa3.63□□□□□ -1.83
ERBB3-216ENST00000550869 SYNE1Q8NF91 8797 aaKnown RBP3.62□□□□□ -1.83
ERBB3-216ENST00000550869 LUZP6Q538Z0 58 aa3.61□□□□□ -1.83
ERBB3-216ENST00000550869 KRTAP4-11Q9BYQ6 195 aa3.55□□□□□ -1.84
ERBB3-216ENST00000550869 KRTAP5-2Q701N4 177 aa3.52□□□□□ -1.85
ERBB3-216ENST00000550869 KRTAP9-4Q9BYQ2 154 aa3.52□□□□□ -1.85
ERBB3-216ENST00000550869 MUC5ACP98088 5654 aa3.46□□□□□ -1.86
ERBB3-216ENST00000550869 KRTAP5-8O75690 187 aa3.43□□□□□ -1.86
ERBB3-216ENST00000550869 MUC5BQ9HC84 5762 aaPredicted RBP3.42□□□□□ -1.86
ERBB3-216ENST00000550869 NDUFAF8A1L188 74 aa3.37□□□□□ -1.87
ERBB3-216ENST00000550869 KRTAP6-2Q3LI66 62 aa3.36□□□□□ -1.87
ERBB3-216ENST00000550869 MT3P25713 68 aa3.33□□□□□ -1.88
ERBB3-216ENST00000550869 KRTAP9-9Q9BYP9 154 aa3.31□□□□□ -1.88
ERBB3-216ENST00000550869 OBSCNQ5VST9 7968 aa3.28□□□□□ -1.88
ERBB3-216ENST00000550869 KRTAP5-1Q6L8H4 278 aa3.18□□□□□ -1.9
ERBB3-216ENST00000550869 LCE3DQ9BYE3 92 aa3.06□□□□□ -1.92
ERBB3-216ENST00000550869 LCE1EQ5T753 118 aa3.01□□□□□ -1.93
ERBB3-216ENST00000550869 LCE3EQ5T5B0 92 aa2.96□□□□□ -1.94
ERBB3-216ENST00000550869 A0A0A0MQY5 61 aa2.9□□□□□ -1.95
ERBB3-216ENST00000550869 H3BS24 57 aa2.89□□□□□ -1.95
ERBB3-216ENST00000550869 KRTAP4-2Q9BYR5 136 aa2.83□□□□□ -1.96
ERBB3-216ENST00000550869 INE1O15225 51 aa2.82□□□□□ -1.96
ERBB3-216ENST00000550869 LCE1CQ5T751 118 aa2.79□□□□□ -1.96
ERBB3-216ENST00000550869 LCE1BQ5T7P3 118 aa2.79□□□□□ -1.96
ERBB3-216ENST00000550869 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.6□□□□□ -1.99
ERBB3-216ENST00000550869 KRTAP4-12Q9BQ66 201 aa2.59□□□□□ -1.99
ERBB3-216ENST00000550869 LCE1FQ5T754 118 aa2.55□□□□□ -2
ERBB3-216ENST00000550869 KRTAP5-11Q6L8G4 156 aa2.55□□□□□ -2
ERBB3-216ENST00000550869 PRM1P04553 51 aa2.46□□□□□ -2.02
ERBB3-216ENST00000550869 KRTAP21-2Q3LI59 83 aa2.41□□□□□ -2.02
ERBB3-216ENST00000550869 PHGR1C9JFL3 82 aa2.35□□□□□ -2.03
ERBB3-216ENST00000550869 KRTAP4-4Q9BYR3 166 aa2.08□□□□□ -2.08
ERBB3-216ENST00000550869 MUC19Q7Z5P9 8384 aa2.04□□□□□ -2.08
ERBB3-216ENST00000550869 KRTAP21-1Q3LI58 79 aa1.81□□□□□ -2.12
ERBB3-216ENST00000550869 MUC16Q8WXI7 14507 aa1.4□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 5.5 ms