RNA–Protein interactions for RNA: ENST00000550795.1

PXN-217, Transcript of paxillin, humanhuman

TSL 3

Gene PXN, Length 513 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-217ENST00000550795 MT1MQ8N339 61 aa8.64□□□□□ -1.03
PXN-217ENST00000550795 LCE1DQ5T752 114 aa8.59□□□□□ -1.03
PXN-217ENST00000550795 UQCR11O14957 56 aa8.56□□□□□ -1.04
PXN-217ENST00000550795 HMCN1Q96RW7 5635 aa8.51□□□□□ -1.05
PXN-217ENST00000550795 RPS28P62857 69 aaKnown RBP8.51□□□□□ -1.05
PXN-217ENST00000550795 KRTAP4-3Q9BYR4 195 aa8.49□□□□□ -1.05
PXN-217ENST00000550795 LCE4AQ5TA78 99 aa8.45□□□□□ -1.06
PXN-217ENST00000550795 MT4P47944 62 aa8.42□□□□□ -1.06
PXN-217ENST00000550795 V9GYY9 64 aa8.41□□□□□ -1.06
PXN-217ENST00000550795 MIR22HGQ0VDD5 57 aa8.39□□□□□ -1.07
PXN-217ENST00000550795 KRTAP12-3P60328 96 aa8.38□□□□□ -1.07
PXN-217ENST00000550795 AHNAK2Q8IVF2 5795 aa8.34□□□□□ -1.07
PXN-217ENST00000550795 KRTAP5-4Q6L8H1 288 aa8.33□□□□□ -1.08
PXN-217ENST00000550795 KRTAP4-7Q9BYR0 210 aa8.31□□□□□ -1.08
PXN-217ENST00000550795 Q1T7F1 81 aa8.27□□□□□ -1.09
PXN-217ENST00000550795 PSPHP1O15172 72 aa8.26□□□□□ -1.09
PXN-217ENST00000550795 KRTAP25-1Q3LHN0 102 aa8.23□□□□□ -1.09
PXN-217ENST00000550795 KRTAP4-6Q9BYQ5 205 aa8.21□□□□□ -1.1
PXN-217ENST00000550795 K7ERS5 55 aa8.18□□□□□ -1.1
PXN-217ENST00000550795 KRTAP5-10Q6L8G5 202 aa8.13□□□□□ -1.11
PXN-217ENST00000550795 A6NED7 52 aa7.96□□□□□ -1.14
PXN-217ENST00000550795 KRTAP5-5Q701N2 237 aaPredicted RBP7.92□□□□□ -1.14
PXN-217ENST00000550795 KRTAP23-1A1A580 65 aa7.89□□□□□ -1.15
PXN-217ENST00000550795 LOC100996750A0A140TA64 210 aa7.87□□□□□ -1.15
PXN-217ENST00000550795 KRTAP20-2Q3LI61 65 aa7.87□□□□□ -1.15
PXN-217ENST00000550795 KRTAP5-3Q6L8H2 238 aa7.87□□□□□ -1.15
PXN-217ENST00000550795 KRTAP15-1Q3LI76 137 aa7.83□□□□□ -1.16
PXN-217ENST00000550795 KRTAP5-7Q6L8G8 165 aa7.83□□□□□ -1.16
PXN-217ENST00000550795 KRTAP19-4Q3LI73 84 aa7.82□□□□□ -1.16
PXN-217ENST00000550795 CDC42SE1Q9NRR8 79 aa7.77□□□□□ -1.17
PXN-217ENST00000550795 SPRR5A0A1B0GTR4 108 aa7.75□□□□□ -1.17
PXN-217ENST00000550795 LCE3CQ5T5A8 94 aa7.72□□□□□ -1.17
PXN-217ENST00000550795 KRTAP12-4P60329 112 aa7.67□□□□□ -1.18
PXN-217ENST00000550795 ROMO1P60602 79 aa7.67□□□□□ -1.18
PXN-217ENST00000550795 SYNE1Q8NF91 8797 aaKnown RBP7.67□□□□□ -1.18
PXN-217ENST00000550795 BRK1Q8WUW1 75 aa7.65□□□□□ -1.18
PXN-217ENST00000550795 MT1AP04731 61 aa7.36□□□□□ -1.23
PXN-217ENST00000550795 KRTAP6-1Q3LI64 71 aa7.36□□□□□ -1.23
PXN-217ENST00000550795 KRTAP9-6A8MVA2 160 aa7.34□□□□□ -1.23
PXN-217ENST00000550795 PRO0628Q9UI54 55 aa7.34□□□□□ -1.23
PXN-217ENST00000550795 KRTAP5-2Q701N4 177 aa7.28□□□□□ -1.24
PXN-217ENST00000550795 PMAIP1Q13794 54 aa7.25□□□□□ -1.25
PXN-217ENST00000550795 KRTAP4-11Q9BYQ6 195 aa7.22□□□□□ -1.25
PXN-217ENST00000550795 KRTAP9-4Q9BYQ2 154 aa7.13□□□□□ -1.27
PXN-217ENST00000550795 KRTAP5-8O75690 187 aa7.02□□□□□ -1.29
PXN-217ENST00000550795 KRTAP6-2Q3LI66 62 aa7.02□□□□□ -1.29
PXN-217ENST00000550795 AHNAKQ09666 5890 aaKnown RBP6.89□□□□□ -1.31
PXN-217ENST00000550795 MUC5BQ9HC84 5762 aaPredicted RBP6.88□□□□□ -1.31
PXN-217ENST00000550795 OBSCNQ5VST9 7968 aa6.87□□□□□ -1.31
PXN-217ENST00000550795 MUC5ACP98088 5654 aa6.87□□□□□ -1.31
PXN-217ENST00000550795 KTN1-AS1Q86SY8 53 aa6.85□□□□□ -1.31
PXN-217ENST00000550795 MT3P25713 68 aa6.72□□□□□ -1.33
PXN-217ENST00000550795 PRAC1Q96KF2 57 aa6.67□□□□□ -1.34
PXN-217ENST00000550795 KRTAP9-9Q9BYP9 154 aa6.6□□□□□ -1.35
PXN-217ENST00000550795 KRTAP5-1Q6L8H4 278 aa6.57□□□□□ -1.36
PXN-217ENST00000550795 SVIPQ8NHG7 77 aa6.53□□□□□ -1.36
PXN-217ENST00000550795 LCE1EQ5T753 118 aa6.15□□□□□ -1.42
PXN-217ENST00000550795 KRTAP4-2Q9BYR5 136 aa5.89□□□□□ -1.47
PXN-217ENST00000550795 LCE1BQ5T7P3 118 aa5.85□□□□□ -1.47
PXN-217ENST00000550795 LUZP6Q538Z0 58 aa5.74□□□□□ -1.49
PXN-217ENST00000550795 LCE1CQ5T751 118 aa5.72□□□□□ -1.49
PXN-217ENST00000550795 LCE3DQ9BYE3 92 aa5.56□□□□□ -1.52
PXN-217ENST00000550795 KRTAP4-12Q9BQ66 201 aa5.39□□□□□ -1.55
PXN-217ENST00000550795 NDUFAF8A1L188 74 aa5.23□□□□□ -1.57
PXN-217ENST00000550795 LCE3EQ5T5B0 92 aa5.22□□□□□ -1.57
PXN-217ENST00000550795 KRTAP5-11Q6L8G4 156 aa5.21□□□□□ -1.58
PXN-217ENST00000550795 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.2□□□□□ -1.58
PXN-217ENST00000550795 LCE1FQ5T754 118 aa5.05□□□□□ -1.6
PXN-217ENST00000550795 KRTAP21-2Q3LI59 83 aa4.85□□□□□ -1.63
PXN-217ENST00000550795 A0A0A0MQY5 61 aa4.71□□□□□ -1.66
PXN-217ENST00000550795 PHGR1C9JFL3 82 aa4.7□□□□□ -1.66
PXN-217ENST00000550795 KRTAP4-4Q9BYR3 166 aa4.48□□□□□ -1.69
PXN-217ENST00000550795 INE1O15225 51 aa4.43□□□□□ -1.7
PXN-217ENST00000550795 MUC19Q7Z5P9 8384 aa4.24□□□□□ -1.73
PXN-217ENST00000550795 H3BS24 57 aa4.13□□□□□ -1.75
PXN-217ENST00000550795 PRM1P04553 51 aa3.95□□□□□ -1.78
PXN-217ENST00000550795 KRTAP21-1Q3LI58 79 aa3.55□□□□□ -1.84
PXN-217ENST00000550795 MUC16Q8WXI7 14507 aa3.03□□□□□ -1.92
Retrieved 78 of 20,778 RNA–protein pairs in 92.9 ms