RNA–Protein interactions for RNA: ENST00000549047.5

ARFGAP1-221, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 5

Gene ARFGAP1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-221ENST00000549047 TMEM258P61165 79 aa5.38□□□□□ -1.55
ARFGAP1-221ENST00000549047 LINC01558Q9Y6Z2 57 aa5.36□□□□□ -1.55
ARFGAP1-221ENST00000549047 PCP4P48539 62 aa5.34□□□□□ -1.55
ARFGAP1-221ENST00000549047 HMCN1Q96RW7 5635 aa5.3□□□□□ -1.56
ARFGAP1-221ENST00000549047 LCE1DQ5T752 114 aa5.29□□□□□ -1.56
ARFGAP1-221ENST00000549047 KRTAP4-3Q9BYR4 195 aa5.28□□□□□ -1.56
ARFGAP1-221ENST00000549047 LCE4AQ5TA78 99 aa5.26□□□□□ -1.57
ARFGAP1-221ENST00000549047 UQCR11O14957 56 aa5.25□□□□□ -1.57
ARFGAP1-221ENST00000549047 MT4P47944 62 aa5.23□□□□□ -1.57
ARFGAP1-221ENST00000549047 KRTAP12-3P60328 96 aa5.2□□□□□ -1.58
ARFGAP1-221ENST00000549047 KRTAP5-4Q6L8H1 288 aa5.17□□□□□ -1.58
ARFGAP1-221ENST00000549047 KRTAP4-7Q9BYR0 210 aa5.14□□□□□ -1.59
ARFGAP1-221ENST00000549047 MIR22HGQ0VDD5 57 aa5.13□□□□□ -1.59
ARFGAP1-221ENST00000549047 AHNAK2Q8IVF2 5795 aa5.11□□□□□ -1.59
ARFGAP1-221ENST00000549047 KRTAP25-1Q3LHN0 102 aa5.09□□□□□ -1.59
ARFGAP1-221ENST00000549047 RPS28P62857 69 aaKnown RBP5.06□□□□□ -1.6
ARFGAP1-221ENST00000549047 K7ERS5 55 aa5.04□□□□□ -1.6
ARFGAP1-221ENST00000549047 Q1T7F1 81 aa5.03□□□□□ -1.6
ARFGAP1-221ENST00000549047 PSPHP1O15172 72 aa5.01□□□□□ -1.61
ARFGAP1-221ENST00000549047 V9GYY9 64 aa5□□□□□ -1.61
ARFGAP1-221ENST00000549047 KRTAP5-5Q701N2 237 aaPredicted RBP4.95□□□□□ -1.62
ARFGAP1-221ENST00000549047 KRTAP5-10Q6L8G5 202 aa4.93□□□□□ -1.62
ARFGAP1-221ENST00000549047 KRTAP23-1A1A580 65 aa4.88□□□□□ -1.63
ARFGAP1-221ENST00000549047 KRTAP20-2Q3LI61 65 aa4.88□□□□□ -1.63
ARFGAP1-221ENST00000549047 KRTAP19-4Q3LI73 84 aa4.87□□□□□ -1.63
ARFGAP1-221ENST00000549047 SPRR5A0A1B0GTR4 108 aa4.84□□□□□ -1.63
ARFGAP1-221ENST00000549047 KRTAP15-1Q3LI76 137 aa4.84□□□□□ -1.63
ARFGAP1-221ENST00000549047 A6NED7 52 aa4.83□□□□□ -1.64
ARFGAP1-221ENST00000549047 KRTAP12-4P60329 112 aa4.83□□□□□ -1.64
ARFGAP1-221ENST00000549047 KRTAP4-12Q9BQ66 201 aa4.83□□□□□ -1.64
ARFGAP1-221ENST00000549047 KRTAP5-3Q6L8H2 238 aa4.81□□□□□ -1.64
ARFGAP1-221ENST00000549047 SYNE1Q8NF91 8797 aaKnown RBP4.79□□□□□ -1.64
ARFGAP1-221ENST00000549047 LCE3CQ5T5A8 94 aa4.78□□□□□ -1.64
ARFGAP1-221ENST00000549047 CDC42SE1Q9NRR8 79 aa4.77□□□□□ -1.65
ARFGAP1-221ENST00000549047 KRTAP9-9Q9BYP9 154 aa4.76□□□□□ -1.65
ARFGAP1-221ENST00000549047 KRTAP9-4Q9BYQ2 154 aa4.76□□□□□ -1.65
ARFGAP1-221ENST00000549047 KRTAP5-7Q6L8G8 165 aa4.74□□□□□ -1.65
ARFGAP1-221ENST00000549047 ROMO1P60602 79 aa4.69□□□□□ -1.66
ARFGAP1-221ENST00000549047 MT1AP04731 61 aa4.6□□□□□ -1.67
ARFGAP1-221ENST00000549047 KRTAP6-1Q3LI64 71 aa4.57□□□□□ -1.68
ARFGAP1-221ENST00000549047 KRTAP9-6A8MVA2 160 aa4.52□□□□□ -1.69
ARFGAP1-221ENST00000549047 KRTAP5-2Q701N4 177 aa4.52□□□□□ -1.69
ARFGAP1-221ENST00000549047 BRK1Q8WUW1 75 aa4.47□□□□□ -1.69
ARFGAP1-221ENST00000549047 KRTAP4-11Q9BYQ6 195 aa4.47□□□□□ -1.69
ARFGAP1-221ENST00000549047 KRTAP6-2Q3LI66 62 aa4.39□□□□□ -1.71
ARFGAP1-221ENST00000549047 KRTAP4-2Q9BYR5 136 aa4.33□□□□□ -1.72
ARFGAP1-221ENST00000549047 KRTAP5-8O75690 187 aa4.31□□□□□ -1.72
ARFGAP1-221ENST00000549047 OBSCNQ5VST9 7968 aa4.3□□□□□ -1.72
ARFGAP1-221ENST00000549047 AHNAKQ09666 5890 aaKnown RBP4.26□□□□□ -1.73
ARFGAP1-221ENST00000549047 MUC5BQ9HC84 5762 aaPredicted RBP4.24□□□□□ -1.73
ARFGAP1-221ENST00000549047 PMAIP1Q13794 54 aa4.23□□□□□ -1.73
ARFGAP1-221ENST00000549047 MUC5ACP98088 5654 aa4.21□□□□□ -1.74
ARFGAP1-221ENST00000549047 MT3P25713 68 aa4.21□□□□□ -1.74
ARFGAP1-221ENST00000549047 PRO0628Q9UI54 55 aa4.19□□□□□ -1.74
ARFGAP1-221ENST00000549047 KRTAP5-1Q6L8H4 278 aa4.06□□□□□ -1.76
ARFGAP1-221ENST00000549047 PRAC1Q96KF2 57 aa4.03□□□□□ -1.76
ARFGAP1-221ENST00000549047 KTN1-AS1Q86SY8 53 aa3.93□□□□□ -1.78
ARFGAP1-221ENST00000549047 H3BS24 57 aa3.91□□□□□ -1.78
ARFGAP1-221ENST00000549047 LCE1EQ5T753 118 aa3.87□□□□□ -1.79
ARFGAP1-221ENST00000549047 SVIPQ8NHG7 77 aa3.77□□□□□ -1.81
ARFGAP1-221ENST00000549047 LCE1BQ5T7P3 118 aa3.66□□□□□ -1.82
ARFGAP1-221ENST00000549047 LCE1CQ5T751 118 aa3.59□□□□□ -1.83
ARFGAP1-221ENST00000549047 LCE3DQ9BYE3 92 aa3.44□□□□□ -1.86
ARFGAP1-221ENST00000549047 LUZP6Q538Z0 58 aa3.27□□□□□ -1.89
ARFGAP1-221ENST00000549047 KRTAP5-11Q6L8G4 156 aa3.26□□□□□ -1.89
ARFGAP1-221ENST00000549047 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.26□□□□□ -1.89
ARFGAP1-221ENST00000549047 LCE3EQ5T5B0 92 aa3.22□□□□□ -1.89
ARFGAP1-221ENST00000549047 LCE1FQ5T754 118 aa3.17□□□□□ -1.9
ARFGAP1-221ENST00000549047 KRTAP21-2Q3LI59 83 aa3.01□□□□□ -1.93
ARFGAP1-221ENST00000549047 NDUFAF8A1L188 74 aa2.99□□□□□ -1.93
ARFGAP1-221ENST00000549047 PHGR1C9JFL3 82 aa2.87□□□□□ -1.95
ARFGAP1-221ENST00000549047 KRTAP4-4Q9BYR3 166 aa2.77□□□□□ -1.97
ARFGAP1-221ENST00000549047 MUC19Q7Z5P9 8384 aa2.64□□□□□ -1.99
ARFGAP1-221ENST00000549047 A0A0A0MQY5 61 aa2.57□□□□□ -2
ARFGAP1-221ENST00000549047 INE1O15225 51 aa2.46□□□□□ -2.02
ARFGAP1-221ENST00000549047 PRM1P04553 51 aa2.4□□□□□ -2.03
ARFGAP1-221ENST00000549047 KRTAP21-1Q3LI58 79 aa2.18□□□□□ -2.06
ARFGAP1-221ENST00000549047 MUC16Q8WXI7 14507 aa1.82□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 49.7 ms