RNA–Protein interactions for RNA: ENST00000548356.1

C12orf49-204, Transcript of chromosome 12 open reading frame 49, humanhuman

TSL 2 BASIC

Gene C12orf49, Length 923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49-204ENST00000548356 KRTAP13-4Q3LI77 160 aa5.08□□□□□ -1.6
C12orf49-204ENST00000548356 LINC01558Q9Y6Z2 57 aa5.05□□□□□ -1.6
C12orf49-204ENST00000548356 KRTAP20-2Q3LI61 65 aa5.04□□□□□ -1.6
C12orf49-204ENST00000548356 V9GYY9 64 aa5.04□□□□□ -1.6
C12orf49-204ENST00000548356 PRR15LQ9BU68 103 aa5.03□□□□□ -1.6
C12orf49-204ENST00000548356 A0A1B0GU69 56 aa5.02□□□□□ -1.61
C12orf49-204ENST00000548356 SMIM26A0A096LP01 95 aa5.01□□□□□ -1.61
C12orf49-204ENST00000548356 Q1T7F1 81 aa4.99□□□□□ -1.61
C12orf49-204ENST00000548356 A0A1B0GU33 70 aa4.94□□□□□ -1.62
C12orf49-204ENST00000548356 LOC100996750A0A140TA64 210 aa4.91□□□□□ -1.62
C12orf49-204ENST00000548356 C10orf95Q9H7T3 257 aa4.88□□□□□ -1.63
C12orf49-204ENST00000548356 KRTAP5-5Q701N2 237 aaPredicted RBP4.87□□□□□ -1.63
C12orf49-204ENST00000548356 UQCR11O14957 56 aa4.86□□□□□ -1.63
C12orf49-204ENST00000548356 KRTAP12-4P60329 112 aa4.86□□□□□ -1.63
C12orf49-204ENST00000548356 AHNAKQ09666 5890 aaKnown RBP4.86□□□□□ -1.63
C12orf49-204ENST00000548356 SPINT4Q6UDR6 99 aa4.83□□□□□ -1.64
C12orf49-204ENST00000548356 KRTAP4-7Q9BYR0 210 aa4.83□□□□□ -1.64
C12orf49-204ENST00000548356 LCE3AQ5TA76 89 aa4.82□□□□□ -1.64
C12orf49-204ENST00000548356 SYNE1Q8NF91 8797 aaKnown RBP4.82□□□□□ -1.64
C12orf49-204ENST00000548356 PSPHP1O15172 72 aa4.81□□□□□ -1.64
C12orf49-204ENST00000548356 SPATA8Q6RVD6 105 aa4.8□□□□□ -1.64
C12orf49-204ENST00000548356 MUC5ACP98088 5654 aa4.76□□□□□ -1.65
C12orf49-204ENST00000548356 MUC5BQ9HC84 5762 aaPredicted RBP4.76□□□□□ -1.65
C12orf49-204ENST00000548356 KRTAP12-1P59990 96 aa4.75□□□□□ -1.65
C12orf49-204ENST00000548356 MIR22HGQ0VDD5 57 aa4.74□□□□□ -1.65
C12orf49-204ENST00000548356 KRTAP4-11Q9BYQ6 195 aa4.73□□□□□ -1.65
C12orf49-204ENST00000548356 A6NED7 52 aa4.71□□□□□ -1.66
C12orf49-204ENST00000548356 A8MU10 97 aa4.69□□□□□ -1.66
C12orf49-204ENST00000548356 TNP1P09430 55 aa4.68□□□□□ -1.66
C12orf49-204ENST00000548356 CDC42SE1Q9NRR8 79 aa4.65□□□□□ -1.67
C12orf49-204ENST00000548356 KRTAP12-3P60328 96 aa4.64□□□□□ -1.67
C12orf49-204ENST00000548356 K7ERS5 55 aa4.63□□□□□ -1.67
C12orf49-204ENST00000548356 KRTAP5-8O75690 187 aa4.58□□□□□ -1.68
C12orf49-204ENST00000548356 KRTAP5-2Q701N4 177 aa4.56□□□□□ -1.68
C12orf49-204ENST00000548356 BRK1Q8WUW1 75 aa4.45□□□□□ -1.7
C12orf49-204ENST00000548356 KRTAP9-9Q9BYP9 154 aa4.44□□□□□ -1.7
C12orf49-204ENST00000548356 OBSCNQ5VST9 7968 aa4.44□□□□□ -1.7
C12orf49-204ENST00000548356 KRTAP25-1Q3LHN0 102 aa4.4□□□□□ -1.71
C12orf49-204ENST00000548356 KRTAP19-4Q3LI73 84 aa4.39□□□□□ -1.71
C12orf49-204ENST00000548356 MT1AP04731 61 aa4.36□□□□□ -1.71
C12orf49-204ENST00000548356 ROMO1P60602 79 aa4.36□□□□□ -1.71
C12orf49-204ENST00000548356 KRTAP6-1Q3LI64 71 aa4.36□□□□□ -1.71
C12orf49-204ENST00000548356 KRTAP23-1A1A580 65 aa4.31□□□□□ -1.72
C12orf49-204ENST00000548356 PRO0628Q9UI54 55 aa4.3□□□□□ -1.72
C12orf49-204ENST00000548356 KRTAP6-2Q3LI66 62 aa4.27□□□□□ -1.73
C12orf49-204ENST00000548356 KRTAP9-4Q9BYQ2 154 aa4.27□□□□□ -1.73
C12orf49-204ENST00000548356 LCE3CQ5T5A8 94 aa4.23□□□□□ -1.73
C12orf49-204ENST00000548356 PMAIP1Q13794 54 aa4.21□□□□□ -1.74
C12orf49-204ENST00000548356 KRTAP5-1Q6L8H4 278 aa4.18□□□□□ -1.74
C12orf49-204ENST00000548356 KRTAP15-1Q3LI76 137 aa4.17□□□□□ -1.74
C12orf49-204ENST00000548356 SVIPQ8NHG7 77 aa4.07□□□□□ -1.76
C12orf49-204ENST00000548356 MT3P25713 68 aa4.02□□□□□ -1.77
C12orf49-204ENST00000548356 KTN1-AS1Q86SY8 53 aa4.02□□□□□ -1.77
C12orf49-204ENST00000548356 KRTAP9-6A8MVA2 160 aa4□□□□□ -1.77
C12orf49-204ENST00000548356 KRTAP4-12Q9BQ66 201 aa3.98□□□□□ -1.77
C12orf49-204ENST00000548356 PRAC1Q96KF2 57 aa3.9□□□□□ -1.79
C12orf49-204ENST00000548356 LCE1EQ5T753 118 aa3.83□□□□□ -1.8
C12orf49-204ENST00000548356 KRTAP4-2Q9BYR5 136 aa3.81□□□□□ -1.8
C12orf49-204ENST00000548356 H3BS24 57 aa3.72□□□□□ -1.81
C12orf49-204ENST00000548356 LCE1BQ5T7P3 118 aa3.61□□□□□ -1.83
C12orf49-204ENST00000548356 LCE1CQ5T751 118 aa3.55□□□□□ -1.84
C12orf49-204ENST00000548356 KRTAP5-11Q6L8G4 156 aa3.35□□□□□ -1.87
C12orf49-204ENST00000548356 LUZP6Q538Z0 58 aa3.33□□□□□ -1.88
C12orf49-204ENST00000548356 LCE1FQ5T754 118 aa3.31□□□□□ -1.88
C12orf49-204ENST00000548356 PHGR1C9JFL3 82 aa3.22□□□□□ -1.89
C12orf49-204ENST00000548356 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.18□□□□□ -1.9
C12orf49-204ENST00000548356 NDUFAF8A1L188 74 aa2.99□□□□□ -1.93
C12orf49-204ENST00000548356 LCE3DQ9BYE3 92 aa2.94□□□□□ -1.94
C12orf49-204ENST00000548356 KRTAP21-2Q3LI59 83 aa2.89□□□□□ -1.95
C12orf49-204ENST00000548356 MUC19Q7Z5P9 8384 aa2.77□□□□□ -1.97
C12orf49-204ENST00000548356 LCE3EQ5T5B0 92 aa2.72□□□□□ -1.97
C12orf49-204ENST00000548356 KRTAP4-4Q9BYR3 166 aa2.69□□□□□ -1.98
C12orf49-204ENST00000548356 A0A0A0MQY5 61 aa2.64□□□□□ -1.99
C12orf49-204ENST00000548356 INE1O15225 51 aa2.58□□□□□ -2
C12orf49-204ENST00000548356 KRTAP21-1Q3LI58 79 aa2.47□□□□□ -2.01
C12orf49-204ENST00000548356 PRM1P04553 51 aa2.21□□□□□ -2.06
C12orf49-204ENST00000548356 MUC16Q8WXI7 14507 aa1.92□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 91.5 ms