RNA–Protein interactions for RNA: ENST00000548232.1

NR4A1-209, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best) BASIC

Gene NR4A1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-209ENST00000548232 PMAIP1Q13794 54 aa4.98□□□□□ -1.61
NR4A1-209ENST00000548232 ROMO1P60602 79 aa4.96□□□□□ -1.62
NR4A1-209ENST00000548232 LCE5AQ5TCM9 118 aa4.91□□□□□ -1.62
NR4A1-209ENST00000548232 KRTAP19-7Q3SYF9 63 aa4.89□□□□□ -1.63
NR4A1-209ENST00000548232 KRTAP19-3Q7Z4W3 81 aa4.88□□□□□ -1.63
NR4A1-209ENST00000548232 MT1EP04732 61 aa4.87□□□□□ -1.63
NR4A1-209ENST00000548232 TNP1P09430 55 aa4.84□□□□□ -1.63
NR4A1-209ENST00000548232 KRTAP25-1Q3LHN0 102 aa4.84□□□□□ -1.63
NR4A1-209ENST00000548232 LCE1DQ5T752 114 aa4.81□□□□□ -1.64
NR4A1-209ENST00000548232 LCE3AQ5TA76 89 aa4.78□□□□□ -1.64
NR4A1-209ENST00000548232 MT4P47944 62 aa4.77□□□□□ -1.65
NR4A1-209ENST00000548232 HMCN1Q96RW7 5635 aa4.76□□□□□ -1.65
NR4A1-209ENST00000548232 MT1GP13640 62 aa4.74□□□□□ -1.65
NR4A1-209ENST00000548232 KRTAP19-5Q3LI72 72 aa4.74□□□□□ -1.65
NR4A1-209ENST00000548232 KTN1-AS1Q86SY8 53 aa4.73□□□□□ -1.65
NR4A1-209ENST00000548232 LCE4AQ5TA78 99 aa4.72□□□□□ -1.65
NR4A1-209ENST00000548232 PP632Q6XCG6 107 aa4.72□□□□□ -1.65
NR4A1-209ENST00000548232 KRTAP23-1A1A580 65 aa4.7□□□□□ -1.66
NR4A1-209ENST00000548232 PRAC1Q96KF2 57 aa4.7□□□□□ -1.66
NR4A1-209ENST00000548232 AHNAK2Q8IVF2 5795 aa4.69□□□□□ -1.66
NR4A1-209ENST00000548232 MT1MQ8N339 61 aa4.66□□□□□ -1.66
NR4A1-209ENST00000548232 MT1LQ93083 61 aa4.61□□□□□ -1.67
NR4A1-209ENST00000548232 KRTAP4-3Q9BYR4 195 aa4.61□□□□□ -1.67
NR4A1-209ENST00000548232 KRTAP4-6Q9BYQ5 205 aa4.58□□□□□ -1.68
NR4A1-209ENST00000548232 KRTAP5-10Q6L8G5 202 aa4.56□□□□□ -1.68
NR4A1-209ENST00000548232 KRTAP12-3P60328 96 aa4.55□□□□□ -1.68
NR4A1-209ENST00000548232 KRTAP5-4Q6L8H1 288 aa4.55□□□□□ -1.68
NR4A1-209ENST00000548232 KRTAP5-7Q6L8G8 165 aa4.42□□□□□ -1.7
NR4A1-209ENST00000548232 KRTAP5-3Q6L8H2 238 aa4.42□□□□□ -1.7
NR4A1-209ENST00000548232 KRTAP4-7Q9BYR0 210 aa4.42□□□□□ -1.7
NR4A1-209ENST00000548232 SVIPQ8NHG7 77 aa4.41□□□□□ -1.7
NR4A1-209ENST00000548232 KRTAP15-1Q3LI76 137 aa4.38□□□□□ -1.71
NR4A1-209ENST00000548232 KRTAP20-2Q3LI61 65 aa4.34□□□□□ -1.71
NR4A1-209ENST00000548232 SPRR5A0A1B0GTR4 108 aa4.32□□□□□ -1.72
NR4A1-209ENST00000548232 KRTAP12-4P60329 112 aa4.27□□□□□ -1.73
NR4A1-209ENST00000548232 KRTAP19-4Q3LI73 84 aa4.25□□□□□ -1.73
NR4A1-209ENST00000548232 KRTAP5-5Q701N2 237 aaPredicted RBP4.25□□□□□ -1.73
NR4A1-209ENST00000548232 LCE3CQ5T5A8 94 aa4.23□□□□□ -1.73
NR4A1-209ENST00000548232 LOC100996750A0A140TA64 210 aa4.2□□□□□ -1.74
NR4A1-209ENST00000548232 SYNE1Q8NF91 8797 aaKnown RBP4.17□□□□□ -1.74
NR4A1-209ENST00000548232 KRTAP9-6A8MVA2 160 aa4.11□□□□□ -1.75
NR4A1-209ENST00000548232 KRTAP4-11Q9BYQ6 195 aa4.04□□□□□ -1.76
NR4A1-209ENST00000548232 AHNAKQ09666 5890 aaKnown RBP3.98□□□□□ -1.77
NR4A1-209ENST00000548232 KRTAP5-2Q701N4 177 aa3.93□□□□□ -1.78
NR4A1-209ENST00000548232 KRTAP6-1Q3LI64 71 aa3.92□□□□□ -1.78
NR4A1-209ENST00000548232 MT1AP04731 61 aa3.91□□□□□ -1.78
NR4A1-209ENST00000548232 MUC5ACP98088 5654 aa3.9□□□□□ -1.78
NR4A1-209ENST00000548232 KRTAP5-8O75690 187 aa3.89□□□□□ -1.79
NR4A1-209ENST00000548232 MUC5BQ9HC84 5762 aaPredicted RBP3.88□□□□□ -1.79
NR4A1-209ENST00000548232 KRTAP9-4Q9BYQ2 154 aa3.83□□□□□ -1.8
NR4A1-209ENST00000548232 OBSCNQ5VST9 7968 aa3.82□□□□□ -1.8
NR4A1-209ENST00000548232 KRTAP6-2Q3LI66 62 aa3.82□□□□□ -1.8
NR4A1-209ENST00000548232 LUZP6Q538Z0 58 aa3.8□□□□□ -1.8
NR4A1-209ENST00000548232 KRTAP9-9Q9BYP9 154 aa3.78□□□□□ -1.8
NR4A1-209ENST00000548232 NDUFAF8A1L188 74 aa3.64□□□□□ -1.83
NR4A1-209ENST00000548232 MT3P25713 68 aa3.61□□□□□ -1.83
NR4A1-209ENST00000548232 KRTAP5-1Q6L8H4 278 aa3.59□□□□□ -1.83
NR4A1-209ENST00000548232 LCE1EQ5T753 118 aa3.34□□□□□ -1.87
NR4A1-209ENST00000548232 LCE1BQ5T7P3 118 aa3.26□□□□□ -1.89
NR4A1-209ENST00000548232 KRTAP4-2Q9BYR5 136 aa3.19□□□□□ -1.9
NR4A1-209ENST00000548232 A0A0A0MQY5 61 aa3.13□□□□□ -1.91
NR4A1-209ENST00000548232 LCE3DQ9BYE3 92 aa3.12□□□□□ -1.91
NR4A1-209ENST00000548232 LCE1CQ5T751 118 aa3.1□□□□□ -1.91
NR4A1-209ENST00000548232 KRTAP4-12Q9BQ66 201 aa3.06□□□□□ -1.92
NR4A1-209ENST00000548232 LCE3EQ5T5B0 92 aa3.03□□□□□ -1.92
NR4A1-209ENST00000548232 INE1O15225 51 aa3.01□□□□□ -1.93
NR4A1-209ENST00000548232 H3BS24 57 aa2.92□□□□□ -1.94
NR4A1-209ENST00000548232 KRTAP5-11Q6L8G4 156 aa2.81□□□□□ -1.96
NR4A1-209ENST00000548232 LCE1FQ5T754 118 aa2.8□□□□□ -1.96
NR4A1-209ENST00000548232 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.75□□□□□ -1.97
NR4A1-209ENST00000548232 PHGR1C9JFL3 82 aa2.71□□□□□ -1.98
NR4A1-209ENST00000548232 PRM1P04553 51 aa2.57□□□□□ -2
NR4A1-209ENST00000548232 KRTAP21-2Q3LI59 83 aa2.57□□□□□ -2
NR4A1-209ENST00000548232 KRTAP4-4Q9BYR3 166 aa2.47□□□□□ -2.01
NR4A1-209ENST00000548232 MUC19Q7Z5P9 8384 aa2.37□□□□□ -2.03
NR4A1-209ENST00000548232 KRTAP21-1Q3LI58 79 aa2.04□□□□□ -2.08
NR4A1-209ENST00000548232 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 11.7 ms