RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 DSTQ03001 7570 aaKnown RBP2.52□□□□□ -2.01
SCAF11-211ENST00000547950 OBSCNQ5VST9 7968 aa2.52□□□□□ -2.01
SCAF11-211ENST00000547950 SPATA8Q6RVD6 105 aa2.52□□□□□ -2.01
SCAF11-211ENST00000547950 KRTAP19-7Q3SYF9 63 aa2.51□□□□□ -2.01
SCAF11-211ENST00000547950 SPINT4Q6UDR6 99 aa2.51□□□□□ -2.01
SCAF11-211ENST00000547950 PRAC1Q96KF2 57 aa2.51□□□□□ -2.01
SCAF11-211ENST00000547950 A0A1B0GU33 70 aa2.5□□□□□ -2.01
SCAF11-211ENST00000547950 MT1EP04732 61 aa2.49□□□□□ -2.01
SCAF11-211ENST00000547950 KRTAP19-3Q7Z4W3 81 aa2.48□□□□□ -2.01
SCAF11-211ENST00000547950 KRTAP4-3Q9BYR4 195 aa2.47□□□□□ -2.01
SCAF11-211ENST00000547950 KRTAP5-2Q701N4 177 aa2.46□□□□□ -2.02
SCAF11-211ENST00000547950 COX7CP15954 63 aa2.45□□□□□ -2.02
SCAF11-211ENST00000547950 KRTAP12-1P59990 96 aa2.45□□□□□ -2.02
SCAF11-211ENST00000547950 KRTAP19-5Q3LI72 72 aa2.45□□□□□ -2.02
SCAF11-211ENST00000547950 H7BZZ5 65 aa2.43□□□□□ -2.02
SCAF11-211ENST00000547950 CYSTM1Q9H1C7 97 aa2.43□□□□□ -2.02
SCAF11-211ENST00000547950 A0A1B0GU69 56 aa2.42□□□□□ -2.02
SCAF11-211ENST00000547950 MT1GP13640 62 aa2.42□□□□□ -2.02
SCAF11-211ENST00000547950 SMIM26A0A096LP01 95 aa2.41□□□□□ -2.02
SCAF11-211ENST00000547950 A8MU10 97 aa2.41□□□□□ -2.02
SCAF11-211ENST00000547950 PP632Q6XCG6 107 aa2.4□□□□□ -2.03
SCAF11-211ENST00000547950 MT1MQ8N339 61 aa2.38□□□□□ -2.03
SCAF11-211ENST00000547950 MT4P47944 62 aa2.37□□□□□ -2.03
SCAF11-211ENST00000547950 LCE3AQ5TA76 89 aa2.37□□□□□ -2.03
SCAF11-211ENST00000547950 MT1LQ93083 61 aa2.37□□□□□ -2.03
SCAF11-211ENST00000547950 TNP1P09430 55 aa2.36□□□□□ -2.03
SCAF11-211ENST00000547950 LCE3EQ5T5B0 92 aa2.36□□□□□ -2.03
SCAF11-211ENST00000547950 C10orf95Q9H7T3 257 aa2.36□□□□□ -2.03
SCAF11-211ENST00000547950 SPRR5A0A1B0GTR4 108 aa2.35□□□□□ -2.03
SCAF11-211ENST00000547950 ANAPC13Q9BS18 74 aa2.34□□□□□ -2.03
SCAF11-211ENST00000547950 NDUFAF8A1L188 74 aa2.33□□□□□ -2.04
SCAF11-211ENST00000547950 PRR15LQ9BU68 103 aa2.32□□□□□ -2.04
SCAF11-211ENST00000547950 AHNAK2Q8IVF2 5795 aa2.32□□□□□ -2.04
SCAF11-211ENST00000547950 CCDC179H3BU77 68 aa2.31□□□□□ -2.04
SCAF11-211ENST00000547950 KRTAP12-3P60328 96 aa2.28□□□□□ -2.04
SCAF11-211ENST00000547950 V9GYY9 64 aa2.28□□□□□ -2.04
SCAF11-211ENST00000547950 HMCN1Q96RW7 5635 aa2.28□□□□□ -2.04
SCAF11-211ENST00000547950 LINC01558Q9Y6Z2 57 aa2.27□□□□□ -2.05
SCAF11-211ENST00000547950 ATP5EP56381 51 aaPredicted RBP2.26□□□□□ -2.05
SCAF11-211ENST00000547950 UQCR11O14957 56 aa2.24□□□□□ -2.05
SCAF11-211ENST00000547950 KRTAP5-10Q6L8G5 202 aa2.21□□□□□ -2.06
SCAF11-211ENST00000547950 TMEM258P61165 79 aa2.19□□□□□ -2.06
SCAF11-211ENST00000547950 MIR22HGQ0VDD5 57 aa2.19□□□□□ -2.06
SCAF11-211ENST00000547950 KRTAP25-1Q3LHN0 102 aa2.19□□□□□ -2.06
SCAF11-211ENST00000547950 KRTAP5-7Q6L8G8 165 aa2.18□□□□□ -2.06
SCAF11-211ENST00000547950 K7ERS5 55 aa2.17□□□□□ -2.06
SCAF11-211ENST00000547950 KRTAP20-2Q3LI61 65 aa2.17□□□□□ -2.06
SCAF11-211ENST00000547950 KRTAP12-4P60329 112 aa2.16□□□□□ -2.06
SCAF11-211ENST00000547950 KRTAP5-5Q701N2 237 aaPredicted RBP2.16□□□□□ -2.06
SCAF11-211ENST00000547950 PSPHP1O15172 72 aa2.13□□□□□ -2.07
SCAF11-211ENST00000547950 KRTAP5-8O75690 187 aa2.1□□□□□ -2.07
SCAF11-211ENST00000547950 AHNAKQ09666 5890 aaKnown RBP2.1□□□□□ -2.07
SCAF11-211ENST00000547950 SYNE1Q8NF91 8797 aaKnown RBP2.09□□□□□ -2.07
SCAF11-211ENST00000547950 Q1T7F1 81 aa2.08□□□□□ -2.08
SCAF11-211ENST00000547950 A6NED7 52 aa2.05□□□□□ -2.08
SCAF11-211ENST00000547950 PRO0628Q9UI54 55 aa2.04□□□□□ -2.08
SCAF11-211ENST00000547950 LCE1CQ5T751 118 aa2.03□□□□□ -2.08
SCAF11-211ENST00000547950 LCE1BQ5T7P3 118 aa2.03□□□□□ -2.08
SCAF11-211ENST00000547950 CDC42SE1Q9NRR8 79 aa2.03□□□□□ -2.08
SCAF11-211ENST00000547950 KRTAP6-1Q3LI64 71 aa2.02□□□□□ -2.09
SCAF11-211ENST00000547950 MT1AP04731 61 aa2.01□□□□□ -2.09
SCAF11-211ENST00000547950 ROMO1P60602 79 aa2□□□□□ -2.09
SCAF11-211ENST00000547950 RPS28P62857 69 aaKnown RBP2□□□□□ -2.09
SCAF11-211ENST00000547950 MUC5BQ9HC84 5762 aaPredicted RBP1.96□□□□□ -2.1
SCAF11-211ENST00000547950 LUZP6Q538Z0 58 aa1.96□□□□□ -2.1
SCAF11-211ENST00000547950 KRTAP6-2Q3LI66 62 aa1.95□□□□□ -2.1
SCAF11-211ENST00000547950 MUC5ACP98088 5654 aa1.94□□□□□ -2.1
SCAF11-211ENST00000547950 PMAIP1Q13794 54 aa1.91□□□□□ -2.1
SCAF11-211ENST00000547950 LCE3DQ9BYE3 92 aa1.84□□□□□ -2.11
SCAF11-211ENST00000547950 MUC19Q7Z5P9 8384 aa1.73□□□□□ -2.13
SCAF11-211ENST00000547950 KTN1-AS1Q86SY8 53 aa1.69□□□□□ -2.14
SCAF11-211ENST00000547950 BRK1Q8WUW1 75 aa1.68□□□□□ -2.14
SCAF11-211ENST00000547950 KRTAP21-2Q3LI59 83 aa1.46□□□□□ -2.18
SCAF11-211ENST00000547950 PHGR1C9JFL3 82 aa1.37□□□□□ -2.19
SCAF11-211ENST00000547950 INE1O15225 51 aa1.29□□□□□ -2.2
SCAF11-211ENST00000547950 PRM1P04553 51 aa1.03□□□□□ -2.24
SCAF11-211ENST00000547950 KRTAP21-1Q3LI58 79 aa1.02□□□□□ -2.25
SCAF11-211ENST00000547950 MUC16Q8WXI7 14507 aa0.79□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 87.6 ms