RNA–Protein interactions for RNA: ENST00000545284.1

COPA-207, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-207ENST00000545284 KRTAP5-8O75690 187 aa2.4□□□□□ -2.03
COPA-207ENST00000545284 SMIM20Q8N5G0 67 aa2.4□□□□□ -2.03
COPA-207ENST00000545284 SPTSSBQ8NFR3 76 aa2.4□□□□□ -2.03
COPA-207ENST00000545284 MP68P56378 58 aa2.39□□□□□ -2.03
COPA-207ENST00000545284 SYNE1Q8NF91 8797 aaKnown RBP2.38□□□□□ -2.03
COPA-207ENST00000545284 OCR1Q9BZK8 76 aa2.38□□□□□ -2.03
COPA-207ENST00000545284 SERP2Q8N6R1 65 aa2.37□□□□□ -2.03
COPA-207ENST00000545284 PRAC1Q96KF2 57 aa2.37□□□□□ -2.03
COPA-207ENST00000545284 H3BPC8 53 aa2.35□□□□□ -2.03
COPA-207ENST00000545284 ANAPC13Q9BS18 74 aa2.35□□□□□ -2.03
COPA-207ENST00000545284 C10orf95Q9H7T3 257 aa2.35□□□□□ -2.03
COPA-207ENST00000545284 V9GYY9 64 aa2.34□□□□□ -2.03
COPA-207ENST00000545284 COX7CP15954 63 aa2.33□□□□□ -2.04
COPA-207ENST00000545284 KRTAP15-1Q3LI76 137 aa2.33□□□□□ -2.04
COPA-207ENST00000545284 KRTAP5-2Q701N4 177 aa2.33□□□□□ -2.04
COPA-207ENST00000545284 ACYP2P14621 99 aa2.32□□□□□ -2.04
COPA-207ENST00000545284 KRTAP13-4Q3LI77 160 aa2.32□□□□□ -2.04
COPA-207ENST00000545284 CCDC179H3BU77 68 aa2.28□□□□□ -2.04
COPA-207ENST00000545284 LCE3AQ5TA76 89 aa2.28□□□□□ -2.04
COPA-207ENST00000545284 SNURFQ9Y675 71 aa2.28□□□□□ -2.04
COPA-207ENST00000545284 H7BZZ5 65 aa2.26□□□□□ -2.05
COPA-207ENST00000545284 SPANXA2-OT1Q8N9U9 137 aa2.26□□□□□ -2.05
COPA-207ENST00000545284 OBSCNQ5VST9 7968 aa2.25□□□□□ -2.05
COPA-207ENST00000545284 CHKB-CPT1BH3BT56 60 aa2.23□□□□□ -2.05
COPA-207ENST00000545284 TNP1P09430 55 aa2.23□□□□□ -2.05
COPA-207ENST00000545284 ATP5EP56381 51 aaPredicted RBP2.23□□□□□ -2.05
COPA-207ENST00000545284 KRTAP12-3P60328 96 aa2.23□□□□□ -2.05
COPA-207ENST00000545284 TMEM258P61165 79 aa2.23□□□□□ -2.05
COPA-207ENST00000545284 SPINT4Q6UDR6 99 aa2.22□□□□□ -2.05
COPA-207ENST00000545284 KRTAP12-1P59990 96 aa2.18□□□□□ -2.06
COPA-207ENST00000545284 NDUFAF8A1L188 74 aa2.17□□□□□ -2.06
COPA-207ENST00000545284 MT1AP04731 61 aa2.16□□□□□ -2.06
COPA-207ENST00000545284 KRTAP5-1Q6L8H4 278 aa2.16□□□□□ -2.06
COPA-207ENST00000545284 COA5Q86WW8 74 aa2.16□□□□□ -2.06
COPA-207ENST00000545284 SERP1Q9Y6X1 66 aa2.16□□□□□ -2.06
COPA-207ENST00000545284 RPS28P62857 69 aaKnown RBP2.15□□□□□ -2.07
COPA-207ENST00000545284 KRTAP6-1Q3LI64 71 aa2.14□□□□□ -2.07
COPA-207ENST00000545284 SMIM26A0A096LP01 95 aa2.13□□□□□ -2.07
COPA-207ENST00000545284 KRTAP6-2Q3LI66 62 aa2.13□□□□□ -2.07
COPA-207ENST00000545284 SPATA8Q6RVD6 105 aa2.13□□□□□ -2.07
COPA-207ENST00000545284 PSPHP1O15172 72 aa2.12□□□□□ -2.07
COPA-207ENST00000545284 PRO0628Q9UI54 55 aa2.12□□□□□ -2.07
COPA-207ENST00000545284 A0A1B0GU33 70 aa2.1□□□□□ -2.07
COPA-207ENST00000545284 LINC01558Q9Y6Z2 57 aa2.08□□□□□ -2.08
COPA-207ENST00000545284 Q1T7F1 81 aa2.07□□□□□ -2.08
COPA-207ENST00000545284 A0A1B0GU69 56 aa2.06□□□□□ -2.08
COPA-207ENST00000545284 PRR15LQ9BU68 103 aa2.06□□□□□ -2.08
COPA-207ENST00000545284 KRTAP25-1Q3LHN0 102 aa2.04□□□□□ -2.08
COPA-207ENST00000545284 MT3P25713 68 aa2.03□□□□□ -2.08
COPA-207ENST00000545284 LCE3CQ5T5A8 94 aa2.02□□□□□ -2.09
COPA-207ENST00000545284 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.02□□□□□ -2.09
COPA-207ENST00000545284 UQCR11O14957 56 aa1.99□□□□□ -2.09
COPA-207ENST00000545284 LCE1EQ5T753 118 aa1.99□□□□□ -2.09
COPA-207ENST00000545284 PMAIP1Q13794 54 aa1.97□□□□□ -2.09
COPA-207ENST00000545284 LUZP6Q538Z0 58 aa1.97□□□□□ -2.09
COPA-207ENST00000545284 A6NED7 52 aa1.96□□□□□ -2.1
COPA-207ENST00000545284 MIR22HGQ0VDD5 57 aa1.96□□□□□ -2.1
COPA-207ENST00000545284 A8MU10 97 aa1.95□□□□□ -2.1
COPA-207ENST00000545284 K7ERS5 55 aa1.95□□□□□ -2.1
COPA-207ENST00000545284 CDC42SE1Q9NRR8 79 aa1.93□□□□□ -2.1
COPA-207ENST00000545284 KRTAP5-11Q6L8G4 156 aa1.92□□□□□ -2.1
COPA-207ENST00000545284 BRK1Q8WUW1 75 aa1.89□□□□□ -2.11
COPA-207ENST00000545284 KRTAP9-6A8MVA2 160 aa1.87□□□□□ -2.11
COPA-207ENST00000545284 LCE1CQ5T751 118 aa1.83□□□□□ -2.12
COPA-207ENST00000545284 LCE1BQ5T7P3 118 aa1.83□□□□□ -2.12
COPA-207ENST00000545284 ROMO1P60602 79 aa1.8□□□□□ -2.12
COPA-207ENST00000545284 LCE1FQ5T754 118 aa1.78□□□□□ -2.12
COPA-207ENST00000545284 KTN1-AS1Q86SY8 53 aa1.78□□□□□ -2.12
COPA-207ENST00000545284 PHGR1C9JFL3 82 aa1.72□□□□□ -2.13
COPA-207ENST00000545284 KRTAP4-4Q9BYR3 166 aa1.7□□□□□ -2.14
COPA-207ENST00000545284 LCE3EQ5T5B0 92 aa1.55□□□□□ -2.16
COPA-207ENST00000545284 KRTAP21-2Q3LI59 83 aa1.44□□□□□ -2.18
COPA-207ENST00000545284 MUC19Q7Z5P9 8384 aa1.42□□□□□ -2.18
COPA-207ENST00000545284 LCE3DQ9BYE3 92 aa1.39□□□□□ -2.19
COPA-207ENST00000545284 INE1O15225 51 aa1.36□□□□□ -2.19
COPA-207ENST00000545284 KRTAP21-1Q3LI58 79 aa1.35□□□□□ -2.19
COPA-207ENST00000545284 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
COPA-207ENST00000545284 PRM1P04553 51 aa0.92□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 111.5 ms