RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 KRTAP19-7Q3SYF9 63 aa4.11□□□□□ -1.75
DDB1-222ENST00000543627 CDC42SE1Q9NRR8 79 aa4.11□□□□□ -1.75
DDB1-222ENST00000543627 KRTAP19-5Q3LI72 72 aa4.1□□□□□ -1.75
DDB1-222ENST00000543627 GPR98Q8WXG9 6306 aa4.09□□□□□ -1.75
DDB1-222ENST00000543627 LCE3BQ5TA77 95 aa4.09□□□□□ -1.75
DDB1-222ENST00000543627 MT1EP04732 61 aa4.08□□□□□ -1.76
DDB1-222ENST00000543627 K7ERS5 55 aa4.06□□□□□ -1.76
DDB1-222ENST00000543627 LCE3AQ5TA76 89 aa4.06□□□□□ -1.76
DDB1-222ENST00000543627 PRAC1Q96KF2 57 aa4.05□□□□□ -1.76
DDB1-222ENST00000543627 KRTAP19-3Q7Z4W3 81 aa4.04□□□□□ -1.76
DDB1-222ENST00000543627 LUZP6Q538Z0 58 aa4.03□□□□□ -1.76
DDB1-222ENST00000543627 A6NED7 52 aa4.02□□□□□ -1.77
DDB1-222ENST00000543627 ROMO1P60602 79 aa4□□□□□ -1.77
DDB1-222ENST00000543627 LCE5AQ5TCM9 118 aa4□□□□□ -1.77
DDB1-222ENST00000543627 MT1GP13640 62 aa3.95□□□□□ -1.78
DDB1-222ENST00000543627 PP632Q6XCG6 107 aa3.95□□□□□ -1.78
DDB1-222ENST00000543627 DSTQ03001 7570 aaKnown RBP3.93□□□□□ -1.78
DDB1-222ENST00000543627 KRTAP23-1A1A580 65 aa3.93□□□□□ -1.78
DDB1-222ENST00000543627 MT1LQ93083 61 aa3.93□□□□□ -1.78
DDB1-222ENST00000543627 KRTAP25-1Q3LHN0 102 aa3.91□□□□□ -1.78
DDB1-222ENST00000543627 KRTAP12-3P60328 96 aa3.89□□□□□ -1.79
DDB1-222ENST00000543627 MT1MQ8N339 61 aa3.89□□□□□ -1.79
DDB1-222ENST00000543627 KRTAP4-9Q9BYQ8 210 aa3.85□□□□□ -1.79
DDB1-222ENST00000543627 KRTAP4-3Q9BYR4 195 aa3.85□□□□□ -1.79
DDB1-222ENST00000543627 KRTAP4-7Q9BYR0 210 aa3.8□□□□□ -1.8
DDB1-222ENST00000543627 NDUFAF8A1L188 74 aa3.76□□□□□ -1.81
DDB1-222ENST00000543627 MT4P47944 62 aa3.72□□□□□ -1.81
DDB1-222ENST00000543627 KRTAP5-10Q6L8G5 202 aa3.7□□□□□ -1.82
DDB1-222ENST00000543627 LCE1DQ5T752 114 aa3.69□□□□□ -1.82
DDB1-222ENST00000543627 LCE4AQ5TA78 99 aa3.68□□□□□ -1.82
DDB1-222ENST00000543627 LOC100996750A0A140TA64 210 aa3.67□□□□□ -1.82
DDB1-222ENST00000543627 KRTAP15-1Q3LI76 137 aa3.67□□□□□ -1.82
DDB1-222ENST00000543627 KRTAP4-6Q9BYQ5 205 aa3.67□□□□□ -1.82
DDB1-222ENST00000543627 KRTAP5-7Q6L8G8 165 aa3.62□□□□□ -1.83
DDB1-222ENST00000543627 HMCN1Q96RW7 5635 aa3.61□□□□□ -1.83
DDB1-222ENST00000543627 LCE3CQ5T5A8 94 aa3.59□□□□□ -1.83
DDB1-222ENST00000543627 AHNAK2Q8IVF2 5795 aa3.58□□□□□ -1.84
DDB1-222ENST00000543627 KRTAP5-4Q6L8H1 288 aa3.58□□□□□ -1.84
DDB1-222ENST00000543627 KRTAP19-4Q3LI73 84 aa3.57□□□□□ -1.84
DDB1-222ENST00000543627 SPRR5A0A1B0GTR4 108 aa3.52□□□□□ -1.85
DDB1-222ENST00000543627 KRTAP5-3Q6L8H2 238 aa3.49□□□□□ -1.85
DDB1-222ENST00000543627 KRTAP5-5Q701N2 237 aaPredicted RBP3.49□□□□□ -1.85
DDB1-222ENST00000543627 KRTAP12-4P60329 112 aa3.47□□□□□ -1.85
DDB1-222ENST00000543627 KRTAP20-2Q3LI61 65 aa3.43□□□□□ -1.86
DDB1-222ENST00000543627 SYNE1Q8NF91 8797 aaKnown RBP3.41□□□□□ -1.86
DDB1-222ENST00000543627 KRTAP9-6A8MVA2 160 aa3.35□□□□□ -1.87
DDB1-222ENST00000543627 KRTAP6-1Q3LI64 71 aa3.34□□□□□ -1.87
DDB1-222ENST00000543627 MT1AP04731 61 aa3.33□□□□□ -1.88
DDB1-222ENST00000543627 KRTAP9-4Q9BYQ2 154 aa3.23□□□□□ -1.89
DDB1-222ENST00000543627 INE1O15225 51 aa3.19□□□□□ -1.9
DDB1-222ENST00000543627 KRTAP6-2Q3LI66 62 aa3.18□□□□□ -1.9
DDB1-222ENST00000543627 KRTAP5-2Q701N4 177 aa3.15□□□□□ -1.91
DDB1-222ENST00000543627 KRTAP4-12Q9BQ66 201 aa3.14□□□□□ -1.91
DDB1-222ENST00000543627 KRTAP9-9Q9BYP9 154 aa3.11□□□□□ -1.91
DDB1-222ENST00000543627 MUC5ACP98088 5654 aa3.11□□□□□ -1.91
DDB1-222ENST00000543627 KRTAP4-11Q9BYQ6 195 aa3.1□□□□□ -1.91
DDB1-222ENST00000543627 AHNAKQ09666 5890 aaKnown RBP3.09□□□□□ -1.91
DDB1-222ENST00000543627 MT3P25713 68 aa3.07□□□□□ -1.92
DDB1-222ENST00000543627 OBSCNQ5VST9 7968 aa3.03□□□□□ -1.92
DDB1-222ENST00000543627 KRTAP5-8O75690 187 aa3.03□□□□□ -1.92
DDB1-222ENST00000543627 MUC5BQ9HC84 5762 aaPredicted RBP3.02□□□□□ -1.93
DDB1-222ENST00000543627 KRTAP4-2Q9BYR5 136 aa2.85□□□□□ -1.95
DDB1-222ENST00000543627 KRTAP5-1Q6L8H4 278 aa2.83□□□□□ -1.96
DDB1-222ENST00000543627 LCE1EQ5T753 118 aa2.73□□□□□ -1.97
DDB1-222ENST00000543627 LCE1BQ5T7P3 118 aa2.7□□□□□ -1.98
DDB1-222ENST00000543627 LCE3DQ9BYE3 92 aa2.63□□□□□ -1.99
DDB1-222ENST00000543627 LCE1CQ5T751 118 aa2.54□□□□□ -2
DDB1-222ENST00000543627 LCE3EQ5T5B0 92 aa2.49□□□□□ -2.01
DDB1-222ENST00000543627 LCE1FQ5T754 118 aa2.39□□□□□ -2.03
DDB1-222ENST00000543627 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.29□□□□□ -2.04
DDB1-222ENST00000543627 KRTAP5-11Q6L8G4 156 aa2.28□□□□□ -2.04
DDB1-222ENST00000543627 PHGR1C9JFL3 82 aa2.17□□□□□ -2.06
DDB1-222ENST00000543627 KRTAP21-2Q3LI59 83 aa2.16□□□□□ -2.06
DDB1-222ENST00000543627 KRTAP4-4Q9BYR3 166 aa2.07□□□□□ -2.08
DDB1-222ENST00000543627 PRM1P04553 51 aa1.96□□□□□ -2.1
DDB1-222ENST00000543627 MUC19Q7Z5P9 8384 aa1.84□□□□□ -2.11
DDB1-222ENST00000543627 KRTAP21-1Q3LI58 79 aa1.64□□□□□ -2.15
DDB1-222ENST00000543627 MUC16Q8WXI7 14507 aa1.25□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 69.4 ms