RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 AHNAKQ09666 5890 aaKnown RBP1.48□□□□□ -2.17
YBX3-210ENST00000540975 ABCA13Q86UQ4 5058 aa1.47□□□□□ -2.17
YBX3-210ENST00000540975 APOBP04114 4563 aaKnown RBP1.47□□□□□ -2.17
YBX3-210ENST00000540975 AHNAK2Q8IVF2 5795 aa1.47□□□□□ -2.17
YBX3-210ENST00000540975 FSIP2Q5CZC0 6907 aa1.47□□□□□ -2.17
YBX3-210ENST00000540975 SMR3BP02814 79 aaPredicted RBP1.46□□□□□ -2.18
YBX3-210ENST00000540975 HERC1Q15751 4861 aa1.45□□□□□ -2.18
YBX3-210ENST00000540975 LRP1Q07954 4544 aaKnown RBP1.44□□□□□ -2.18
YBX3-210ENST00000540975 TNXBP22105 4242 aa1.44□□□□□ -2.18
YBX3-210ENST00000540975 PLECQ15149 4684 aaKnown RBP1.43□□□□□ -2.18
YBX3-210ENST00000540975 DNAH5Q8TE73 4624 aa1.43□□□□□ -2.18
YBX3-210ENST00000540975 STARD9Q9P2P6 4700 aa1.43□□□□□ -2.18
YBX3-210ENST00000540975 PKHD1P08F94 4074 aa1.42□□□□□ -2.18
YBX3-210ENST00000540975 DMBT1Q9UGM3 2413 aaPredicted RBP1.42□□□□□ -2.18
YBX3-210ENST00000540975 FAT2Q9NYQ8 4349 aa1.41□□□□□ -2.18
YBX3-210ENST00000540975 VPS13BQ7Z7G8 4022 aa1.41□□□□□ -2.18
YBX3-210ENST00000540975 LRP1BQ9NZR2 4599 aa1.4□□□□□ -2.19
YBX3-210ENST00000540975 FLGP20930 4061 aaPredicted RBP1.39□□□□□ -2.19
YBX3-210ENST00000540975 FAT4Q6V0I7 4981 aa1.39□□□□□ -2.19
YBX3-210ENST00000540975 PKD1P98161 4303 aa1.39□□□□□ -2.19
YBX3-210ENST00000540975 SSPOA2VEC9 5147 aa1.39□□□□□ -2.19
YBX3-210ENST00000540975 HSPG2P98160 4391 aa1.39□□□□□ -2.19
YBX3-210ENST00000540975 MT1HL1P0DM35 61 aa1.38□□□□□ -2.19
YBX3-210ENST00000540975 HERC2O95714 4834 aa1.38□□□□□ -2.19
YBX3-210ENST00000540975 DYNC1H1Q14204 4646 aaKnown RBP1.37□□□□□ -2.19
YBX3-210ENST00000540975 FAT3Q8TDW7 4589 aa1.36□□□□□ -2.19
YBX3-210ENST00000540975 TNP1P09430 55 aa1.35□□□□□ -2.19
YBX3-210ENST00000540975 KRTAP5-10Q6L8G5 202 aa1.35□□□□□ -2.19
YBX3-210ENST00000540975 MUC5BQ9HC84 5762 aaPredicted RBP1.34□□□□□ -2.19
YBX3-210ENST00000540975 KRTAP20-1Q3LI63 56 aa1.32□□□□□ -2.2
YBX3-210ENST00000540975 FAT1Q14517 4588 aa1.32□□□□□ -2.2
YBX3-210ENST00000540975 DSTQ03001 7570 aaKnown RBP1.3□□□□□ -2.2
YBX3-210ENST00000540975 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
YBX3-210ENST00000540975 KRTAP8-1Q8IUC2 63 aa1.28□□□□□ -2.2
YBX3-210ENST00000540975 KRTAP19-2Q3LHN2 52 aa1.27□□□□□ -2.21
YBX3-210ENST00000540975 SPRR2GQ9BYE4 73 aa1.27□□□□□ -2.21
YBX3-210ENST00000540975 KRTAP2-3P0C7H8 128 aa1.24□□□□□ -2.21
YBX3-210ENST00000540975 KRTAP2-4Q9BYR9 128 aa1.24□□□□□ -2.21
YBX3-210ENST00000540975 KRTAP2-1Q9BYU5 128 aa1.24□□□□□ -2.21
YBX3-210ENST00000540975 LPAP08519 4548 aa1.23□□□□□ -2.21
YBX3-210ENST00000540975 KMT2DO14686 5537 aa1.21□□□□□ -2.22
YBX3-210ENST00000540975 M0R2T5 61 aa1.2□□□□□ -2.22
YBX3-210ENST00000540975 KRTAP19-8Q3LI54 63 aa1.2□□□□□ -2.22
YBX3-210ENST00000540975 MUC17Q685J3 4493 aa1.19□□□□□ -2.22
YBX3-210ENST00000540975 HMCN2Q8NDA2 5059 aa1.18□□□□□ -2.22
YBX3-210ENST00000540975 LRP2P98164 4655 aa1.18□□□□□ -2.22
YBX3-210ENST00000540975 MUC5ACP98088 5654 aa1.17□□□□□ -2.22
YBX3-210ENST00000540975 RNF213Q63HN8 5207 aa1.16□□□□□ -2.22
YBX3-210ENST00000540975 MDN1Q9NU22 5596 aa1.16□□□□□ -2.22
YBX3-210ENST00000540975 MT1HP80294 61 aa1.15□□□□□ -2.23
YBX3-210ENST00000540975 MT2AP02795 61 aa1.13□□□□□ -2.23
YBX3-210ENST00000540975 KRTAP19-5Q3LI72 72 aa1.13□□□□□ -2.23
YBX3-210ENST00000540975 MT1FP04733 61 aa1.12□□□□□ -2.23
YBX3-210ENST00000540975 MT1XP80297 61 aa1.12□□□□□ -2.23
YBX3-210ENST00000540975 MT1BP07438 61 aa1.11□□□□□ -2.23
YBX3-210ENST00000540975 PRM1P04553 51 aa1.06□□□□□ -2.24
YBX3-210ENST00000540975 MT1EP04732 61 aa1.02□□□□□ -2.25
YBX3-210ENST00000540975 USH2AO75445 5202 aa1.01□□□□□ -2.25
YBX3-210ENST00000540975 MUC12Q9UKN1 5478 aa1.01□□□□□ -2.25
YBX3-210ENST00000540975 KRTAP19-7Q3SYF9 63 aa1□□□□□ -2.25
YBX3-210ENST00000540975 MT1LQ93083 61 aa1□□□□□ -2.25
YBX3-210ENST00000540975 SYNE1Q8NF91 8797 aaKnown RBP0.99□□□□□ -2.25
YBX3-210ENST00000540975 MT1GP13640 62 aa0.97□□□□□ -2.25
YBX3-210ENST00000540975 MT1AP04731 61 aa0.96□□□□□ -2.26
YBX3-210ENST00000540975 KRTAP19-6Q3LI70 58 aa0.96□□□□□ -2.26
YBX3-210ENST00000540975 KRTAP19-3Q7Z4W3 81 aa0.93□□□□□ -2.26
YBX3-210ENST00000540975 MT1MQ8N339 61 aa0.91□□□□□ -2.26
YBX3-210ENST00000540975 KRTAP6-2Q3LI66 62 aa0.9□□□□□ -2.27
YBX3-210ENST00000540975 SPRR2FQ96RM1 72 aa0.87□□□□□ -2.27
YBX3-210ENST00000540975 SPRR2DP22532 72 aa0.85□□□□□ -2.27
YBX3-210ENST00000540975 SPRR2BP35325 72 aa0.84□□□□□ -2.27
YBX3-210ENST00000540975 SPRR2AP35326 72 aa0.82□□□□□ -2.28
YBX3-210ENST00000540975 KRTAP6-1Q3LI64 71 aa0.8□□□□□ -2.28
YBX3-210ENST00000540975 SPRR2EP22531 72 aa0.79□□□□□ -2.28
YBX3-210ENST00000540975 KRTAP21-1Q3LI58 79 aa0.78□□□□□ -2.28
YBX3-210ENST00000540975 PHGR1C9JFL3 82 aa0.67□□□□□ -2.3
YBX3-210ENST00000540975 KRTAP20-2Q3LI61 65 aa0.64□□□□□ -2.31
YBX3-210ENST00000540975 MT4P47944 62 aa0.57□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 112.2 ms