RNA–Protein interactions for RNA: ENST00000540803.1

RAB35-204, Transcript of RAB35, member RAS oncogene family, humanhuman

TSL 2

Gene RAB35, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB35-204ENST00000540803 KRTAP4-9Q9BYQ8 210 aa6.7□□□□□ -1.34
RAB35-204ENST00000540803 MIR22HGQ0VDD5 57 aa6.67□□□□□ -1.34
RAB35-204ENST00000540803 KRTAP4-3Q9BYR4 195 aa6.64□□□□□ -1.35
RAB35-204ENST00000540803 KRTAP12-3P60328 96 aa6.61□□□□□ -1.35
RAB35-204ENST00000540803 V9GYY9 64 aa6.58□□□□□ -1.36
RAB35-204ENST00000540803 PSPHP1O15172 72 aa6.57□□□□□ -1.36
RAB35-204ENST00000540803 Q1T7F1 81 aa6.55□□□□□ -1.36
RAB35-204ENST00000540803 LCE1DQ5T752 114 aa6.55□□□□□ -1.36
RAB35-204ENST00000540803 LCE4AQ5TA78 99 aa6.55□□□□□ -1.36
RAB35-204ENST00000540803 KRTAP25-1Q3LHN0 102 aa6.53□□□□□ -1.36
RAB35-204ENST00000540803 K7ERS5 55 aa6.51□□□□□ -1.37
RAB35-204ENST00000540803 KRTAP4-7Q9BYR0 210 aa6.51□□□□□ -1.37
RAB35-204ENST00000540803 MT4P47944 62 aa6.48□□□□□ -1.37
RAB35-204ENST00000540803 GPR98Q8WXG9 6306 aa6.46□□□□□ -1.38
RAB35-204ENST00000540803 KRTAP5-4Q6L8H1 288 aa6.46□□□□□ -1.38
RAB35-204ENST00000540803 HMCN1Q96RW7 5635 aa6.46□□□□□ -1.38
RAB35-204ENST00000540803 SVIPQ8NHG7 77 aa6.43□□□□□ -1.38
RAB35-204ENST00000540803 A6NED7 52 aa6.33□□□□□ -1.4
RAB35-204ENST00000540803 KRTAP4-6Q9BYQ5 205 aa6.31□□□□□ -1.4
RAB35-204ENST00000540803 KRTAP23-1A1A580 65 aa6.3□□□□□ -1.4
RAB35-204ENST00000540803 KRTAP5-5Q701N2 237 aaPredicted RBP6.24□□□□□ -1.41
RAB35-204ENST00000540803 AHNAK2Q8IVF2 5795 aa6.22□□□□□ -1.41
RAB35-204ENST00000540803 RPS28P62857 69 aaKnown RBP6.21□□□□□ -1.42
RAB35-204ENST00000540803 KRTAP19-4Q3LI73 84 aa6.21□□□□□ -1.42
RAB35-204ENST00000540803 KRTAP15-1Q3LI76 137 aa6.19□□□□□ -1.42
RAB35-204ENST00000540803 CDC42SE1Q9NRR8 79 aa6.19□□□□□ -1.42
RAB35-204ENST00000540803 LOC100996750A0A140TA64 210 aa6.16□□□□□ -1.42
RAB35-204ENST00000540803 ROMO1P60602 79 aa6.1□□□□□ -1.43
RAB35-204ENST00000540803 KRTAP20-2Q3LI61 65 aa6.09□□□□□ -1.43
RAB35-204ENST00000540803 LCE3CQ5T5A8 94 aa6.09□□□□□ -1.43
RAB35-204ENST00000540803 KRTAP5-10Q6L8G5 202 aa6.07□□□□□ -1.44
RAB35-204ENST00000540803 SPRR5A0A1B0GTR4 108 aa6.05□□□□□ -1.44
RAB35-204ENST00000540803 KRTAP12-4P60329 112 aa6.02□□□□□ -1.45
RAB35-204ENST00000540803 SYNE1Q8NF91 8797 aaKnown RBP6□□□□□ -1.45
RAB35-204ENST00000540803 KRTAP5-3Q6L8H2 238 aa5.94□□□□□ -1.46
RAB35-204ENST00000540803 KRTAP5-7Q6L8G8 165 aa5.82□□□□□ -1.48
RAB35-204ENST00000540803 MT1AP04731 61 aa5.8□□□□□ -1.48
RAB35-204ENST00000540803 KRTAP9-6A8MVA2 160 aa5.78□□□□□ -1.48
RAB35-204ENST00000540803 KRTAP6-1Q3LI64 71 aa5.78□□□□□ -1.48
RAB35-204ENST00000540803 KRTAP5-2Q701N4 177 aa5.68□□□□□ -1.5
RAB35-204ENST00000540803 KRTAP9-4Q9BYQ2 154 aa5.6□□□□□ -1.51
RAB35-204ENST00000540803 KRTAP4-11Q9BYQ6 195 aa5.54□□□□□ -1.52
RAB35-204ENST00000540803 KRTAP6-2Q3LI66 62 aa5.5□□□□□ -1.53
RAB35-204ENST00000540803 PRO0628Q9UI54 55 aa5.49□□□□□ -1.53
RAB35-204ENST00000540803 BRK1Q8WUW1 75 aa5.44□□□□□ -1.54
RAB35-204ENST00000540803 KRTAP5-8O75690 187 aa5.36□□□□□ -1.55
RAB35-204ENST00000540803 MT3P25713 68 aa5.29□□□□□ -1.56
RAB35-204ENST00000540803 OBSCNQ5VST9 7968 aa5.23□□□□□ -1.57
RAB35-204ENST00000540803 PMAIP1Q13794 54 aa5.13□□□□□ -1.59
RAB35-204ENST00000540803 MUC5BQ9HC84 5762 aaPredicted RBP5.09□□□□□ -1.59
RAB35-204ENST00000540803 KRTAP5-1Q6L8H4 278 aa5.08□□□□□ -1.6
RAB35-204ENST00000540803 KRTAP9-9Q9BYP9 154 aa5.05□□□□□ -1.6
RAB35-204ENST00000540803 AHNAKQ09666 5890 aaKnown RBP5.05□□□□□ -1.6
RAB35-204ENST00000540803 MUC5ACP98088 5654 aa5.04□□□□□ -1.6
RAB35-204ENST00000540803 KTN1-AS1Q86SY8 53 aa5.02□□□□□ -1.61
RAB35-204ENST00000540803 PRAC1Q96KF2 57 aa4.96□□□□□ -1.62
RAB35-204ENST00000540803 LCE1EQ5T753 118 aa4.85□□□□□ -1.63
RAB35-204ENST00000540803 KRTAP4-2Q9BYR5 136 aa4.61□□□□□ -1.67
RAB35-204ENST00000540803 LCE1BQ5T7P3 118 aa4.57□□□□□ -1.68
RAB35-204ENST00000540803 LCE1CQ5T751 118 aa4.51□□□□□ -1.69
RAB35-204ENST00000540803 H3BS24 57 aa4.45□□□□□ -1.7
RAB35-204ENST00000540803 LCE3DQ9BYE3 92 aa4.39□□□□□ -1.71
RAB35-204ENST00000540803 KRTAP4-12Q9BQ66 201 aa4.15□□□□□ -1.75
RAB35-204ENST00000540803 LUZP6Q538Z0 58 aa4.14□□□□□ -1.75
RAB35-204ENST00000540803 LCE3EQ5T5B0 92 aa4.13□□□□□ -1.75
RAB35-204ENST00000540803 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.12□□□□□ -1.75
RAB35-204ENST00000540803 KRTAP5-11Q6L8G4 156 aa4.09□□□□□ -1.75
RAB35-204ENST00000540803 NDUFAF8A1L188 74 aa3.97□□□□□ -1.77
RAB35-204ENST00000540803 LCE1FQ5T754 118 aa3.96□□□□□ -1.78
RAB35-204ENST00000540803 KRTAP21-2Q3LI59 83 aa3.81□□□□□ -1.8
RAB35-204ENST00000540803 A0A0A0MQY5 61 aa3.67□□□□□ -1.82
RAB35-204ENST00000540803 PHGR1C9JFL3 82 aa3.53□□□□□ -1.84
RAB35-204ENST00000540803 KRTAP4-4Q9BYR3 166 aa3.48□□□□□ -1.85
RAB35-204ENST00000540803 INE1O15225 51 aa3.33□□□□□ -1.88
RAB35-204ENST00000540803 MUC19Q7Z5P9 8384 aa3.23□□□□□ -1.89
RAB35-204ENST00000540803 PRM1P04553 51 aa3.14□□□□□ -1.91
RAB35-204ENST00000540803 KRTAP21-1Q3LI58 79 aa2.66□□□□□ -1.98
RAB35-204ENST00000540803 MUC16Q8WXI7 14507 aa2.32□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 10.7 ms