RNA–Protein interactions for RNA: ENST00000540629.5

CARS2-222, Transcript of cysteinyl-tRNA synthetase 2, mitochondrial, human

TSL 4

Gene CARS2, Length 531 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CARS2-222	ENST00000540629	GPR98	Q8WXG9	6306 aa		6.86	□□□□□ -1.31
CARS2-222	ENST00000540629	LCE1D	Q5T752	114 aa		6.85	□□□□□ -1.31
CARS2-222	ENST00000540629	TMEM258	P61165	79 aa		6.83	□□□□□ -1.32
CARS2-222	ENST00000540629	MT4	P47944	62 aa		6.77	□□□□□ -1.33
CARS2-222	ENST00000540629	KRTAP12-3	P60328	96 aa		6.75	□□□□□ -1.33
CARS2-222	ENST00000540629	KRTAP4-3	Q9BYR4	195 aa		6.73	□□□□□ -1.33
CARS2-222	ENST00000540629	KRTAP5-4	Q6L8H1	288 aa		6.69	□□□□□ -1.34
CARS2-222	ENST00000540629	HMCN1	Q96RW7	5635 aa		6.68	□□□□□ -1.34
CARS2-222	ENST00000540629		K7ERS5	55 aa		6.66	□□□□□ -1.34
CARS2-222	ENST00000540629	MIR22HG	Q0VDD5	57 aa		6.66	□□□□□ -1.34
CARS2-222	ENST00000540629	KRTAP25-1	Q3LHN0	102 aa		6.65	□□□□□ -1.34
CARS2-222	ENST00000540629		V9GYY9	64 aa		6.57	□□□□□ -1.36
CARS2-222	ENST00000540629	KRTAP4-7	Q9BYR0	210 aa		6.56	□□□□□ -1.36
CARS2-222	ENST00000540629	KRTAP4-6	Q9BYQ5	205 aa		6.53	□□□□□ -1.36
CARS2-222	ENST00000540629	KRTAP19-4	Q3LI73	84 aa		6.5	□□□□□ -1.37
CARS2-222	ENST00000540629	PSPHP1	O15172	72 aa		6.43	□□□□□ -1.38
CARS2-222	ENST00000540629		Q1T7F1	81 aa		6.42	□□□□□ -1.38
CARS2-222	ENST00000540629	KRTAP23-1	A1A580	65 aa		6.41	□□□□□ -1.38
CARS2-222	ENST00000540629	AHNAK2	Q8IVF2	5795 aa		6.4	□□□□□ -1.38
CARS2-222	ENST00000540629	KRTAP5-10	Q6L8G5	202 aa		6.39	□□□□□ -1.39
CARS2-222	ENST00000540629	KRTAP5-5	Q701N2	237 aa	Predicted RBP	6.38	□□□□□ -1.39
CARS2-222	ENST00000540629	SPRR5	A0A1B0GTR4	108 aa		6.34	□□□□□ -1.39
CARS2-222	ENST00000540629	KRTAP12-4	P60329	112 aa		6.34	□□□□□ -1.39
CARS2-222	ENST00000540629	KRTAP20-2	Q3LI61	65 aa		6.32	□□□□□ -1.4
CARS2-222	ENST00000540629	KRTAP15-1	Q3LI76	137 aa		6.29	□□□□□ -1.4
CARS2-222	ENST00000540629		A6NED7	52 aa		6.27	□□□□□ -1.41
CARS2-222	ENST00000540629	KRTAP5-3	Q6L8H2	238 aa		6.25	□□□□□ -1.41
CARS2-222	ENST00000540629	CDC42SE1	Q9NRR8	79 aa		6.23	□□□□□ -1.41
CARS2-222	ENST00000540629	LOC100996750	A0A140TA64	210 aa		6.22	□□□□□ -1.41
CARS2-222	ENST00000540629	LCE3C	Q5T5A8	94 aa		6.2	□□□□□ -1.42
CARS2-222	ENST00000540629	KRTAP5-7	Q6L8G8	165 aa		6.18	□□□□□ -1.42
CARS2-222	ENST00000540629	SYNE1	Q8NF91	8797 aa	Known RBP	6.15	□□□□□ -1.43
CARS2-222	ENST00000540629	ROMO1	P60602	79 aa		6.1	□□□□□ -1.43
CARS2-222	ENST00000540629	RPS28	P62857	69 aa	Known RBP	6.09	□□□□□ -1.43
CARS2-222	ENST00000540629	MT1A	P04731	61 aa		5.95	□□□□□ -1.46
CARS2-222	ENST00000540629	KRTAP6-1	Q3LI64	71 aa		5.87	□□□□□ -1.47
CARS2-222	ENST00000540629	KRTAP5-2	Q701N4	177 aa		5.85	□□□□□ -1.47
CARS2-222	ENST00000540629	KRTAP4-11	Q9BYQ6	195 aa		5.81	□□□□□ -1.48
CARS2-222	ENST00000540629	KRTAP9-4	Q9BYQ2	154 aa		5.77	□□□□□ -1.49
CARS2-222	ENST00000540629	KRTAP9-6	A8MVA2	160 aa		5.74	□□□□□ -1.49
CARS2-222	ENST00000540629	PCP4	P48539	62 aa		5.73	□□□□□ -1.49
CARS2-222	ENST00000540629	KRTAP6-2	Q3LI66	62 aa		5.65	□□□□□ -1.5
CARS2-222	ENST00000540629	KRTAP5-8	O75690	187 aa		5.59	□□□□□ -1.51
CARS2-222	ENST00000540629	MT3	P25713	68 aa		5.5	□□□□□ -1.53
CARS2-222	ENST00000540629	OBSCN	Q5VST9	7968 aa		5.44	□□□□□ -1.54
CARS2-222	ENST00000540629	KRTAP9-9	Q9BYP9	154 aa		5.39	□□□□□ -1.55
CARS2-222	ENST00000540629	MUC5B	Q9HC84	5762 aa	Predicted RBP	5.33	□□□□□ -1.56
CARS2-222	ENST00000540629	MUC5AC	P98088	5654 aa		5.31	□□□□□ -1.56
CARS2-222	ENST00000540629	AHNAK	Q09666	5890 aa	Known RBP	5.3	□□□□□ -1.56
CARS2-222	ENST00000540629	KRTAP5-1	Q6L8H4	278 aa		5.24	□□□□□ -1.57
CARS2-222	ENST00000540629	BRK1	Q8WUW1	75 aa		5.23	□□□□□ -1.57
CARS2-222	ENST00000540629	LCE1E	Q5T753	118 aa		5.08	□□□□□ -1.6
CARS2-222	ENST00000540629	PMAIP1	Q13794	54 aa		4.94	□□□□□ -1.62
CARS2-222	ENST00000540629	LCE1B	Q5T7P3	118 aa		4.74	□□□□□ -1.65
CARS2-222	ENST00000540629	KRTAP4-2	Q9BYR5	136 aa		4.71	□□□□□ -1.66
CARS2-222	ENST00000540629	LCE1C	Q5T751	118 aa		4.69	□□□□□ -1.66
CARS2-222	ENST00000540629	PRAC1	Q96KF2	57 aa		4.68	□□□□□ -1.66
CARS2-222	ENST00000540629	LCE3D	Q9BYE3	92 aa		4.48	□□□□□ -1.69
CARS2-222	ENST00000540629	PRO0628	Q9UI54	55 aa		4.42	□□□□□ -1.7
CARS2-222	ENST00000540629	KTN1-AS1	Q86SY8	53 aa		4.28	□□□□□ -1.72
CARS2-222	ENST00000540629	KRTAP4-12	Q9BQ66	201 aa		4.28	□□□□□ -1.72
CARS2-222	ENST00000540629	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.25	□□□□□ -1.73
CARS2-222	ENST00000540629	KRTAP5-11	Q6L8G4	156 aa		4.24	□□□□□ -1.73
CARS2-222	ENST00000540629	LCE3E	Q5T5B0	92 aa		4.2	□□□□□ -1.74
CARS2-222	ENST00000540629	LCE1F	Q5T754	118 aa		4.2	□□□□□ -1.74
CARS2-222	ENST00000540629	LUZP6	Q538Z0	58 aa		4.17	□□□□□ -1.74
CARS2-222	ENST00000540629	SVIP	Q8NHG7	77 aa		4.15	□□□□□ -1.75
CARS2-222	ENST00000540629	KRTAP21-2	Q3LI59	83 aa		3.88	□□□□□ -1.79
CARS2-222	ENST00000540629		H3BS24	57 aa		3.87	□□□□□ -1.79
CARS2-222	ENST00000540629	PHGR1	C9JFL3	82 aa		3.76	□□□□□ -1.81
CARS2-222	ENST00000540629	KRTAP4-4	Q9BYR3	166 aa		3.52	□□□□□ -1.85
CARS2-222	ENST00000540629	MUC19	Q7Z5P9	8384 aa		3.35	□□□□□ -1.87
CARS2-222	ENST00000540629	PRM1	P04553	51 aa		3.07	□□□□□ -1.92
CARS2-222	ENST00000540629	NDUFAF8	A1L188	74 aa		3.06	□□□□□ -1.92
CARS2-222	ENST00000540629	KRTAP21-1	Q3LI58	79 aa		2.89	□□□□□ -1.95
CARS2-222	ENST00000540629	INE1	O15225	51 aa		2.51	□□□□□ -2.01
CARS2-222	ENST00000540629		A0A0A0MQY5	61 aa		2.4	□□□□□ -2.03
CARS2-222	ENST00000540629	MUC16	Q8WXI7	14507 aa		2.35	□□□□□ -2.03

Retrieved 78 of 20,778 RNA–protein pairs in 70.2 ms