RNA–Protein interactions for RNA: ENST00000540122.5

PUDP-206, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 2 BASIC

Gene PUDP, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-206ENST00000540122 LCE3AQ5TA76 89 aa4.92□□□□□ -1.62
PUDP-206ENST00000540122 KRTAP5-2Q701N4 177 aa4.92□□□□□ -1.62
PUDP-206ENST00000540122 ANAPC13Q9BS18 74 aa4.92□□□□□ -1.62
PUDP-206ENST00000540122 LINC00643Q86TS7 51 aa4.9□□□□□ -1.63
PUDP-206ENST00000540122 SPTSSBQ8NFR3 76 aa4.88□□□□□ -1.63
PUDP-206ENST00000540122 OCR1Q9BZK8 76 aa4.83□□□□□ -1.64
PUDP-206ENST00000540122 ATP5EP2Q5VTU8 51 aa4.82□□□□□ -1.64
PUDP-206ENST00000540122 OBSCNQ5VST9 7968 aa4.8□□□□□ -1.64
PUDP-206ENST00000540122 ACYP2P14621 99 aa4.79□□□□□ -1.64
PUDP-206ENST00000540122 H3BPC8 53 aa4.76□□□□□ -1.65
PUDP-206ENST00000540122 CCDC179H3BU77 68 aa4.76□□□□□ -1.65
PUDP-206ENST00000540122 SPINT4Q6UDR6 99 aa4.76□□□□□ -1.65
PUDP-206ENST00000540122 COX7CP15954 63 aa4.74□□□□□ -1.65
PUDP-206ENST00000540122 CHKB-CPT1BH3BT56 60 aa4.71□□□□□ -1.66
PUDP-206ENST00000540122 KRTAP12-3P60328 96 aa4.71□□□□□ -1.66
PUDP-206ENST00000540122 SMIM20Q8N5G0 67 aa4.71□□□□□ -1.66
PUDP-206ENST00000540122 SERP2Q8N6R1 65 aa4.71□□□□□ -1.66
PUDP-206ENST00000540122 KRTAP12-1P59990 96 aa4.66□□□□□ -1.66
PUDP-206ENST00000540122 TMEM258P61165 79 aa4.65□□□□□ -1.67
PUDP-206ENST00000540122 TNP1P09430 55 aa4.63□□□□□ -1.67
PUDP-206ENST00000540122 RPS28P62857 69 aaKnown RBP4.61□□□□□ -1.67
PUDP-206ENST00000540122 KRTAP6-1Q3LI64 71 aa4.61□□□□□ -1.67
PUDP-206ENST00000540122 SPATA8Q6RVD6 105 aa4.6□□□□□ -1.67
PUDP-206ENST00000540122 MT1AP04731 61 aa4.57□□□□□ -1.68
PUDP-206ENST00000540122 ATP5EP56381 51 aaPredicted RBP4.56□□□□□ -1.68
PUDP-206ENST00000540122 KRTAP6-2Q3LI66 62 aa4.56□□□□□ -1.68
PUDP-206ENST00000540122 KRTAP5-1Q6L8H4 278 aa4.56□□□□□ -1.68
PUDP-206ENST00000540122 KRTAP5-11Q6L8G4 156 aa4.52□□□□□ -1.69
PUDP-206ENST00000540122 SERP1Q9Y6X1 66 aa4.51□□□□□ -1.69
PUDP-206ENST00000540122 SVIPQ8NHG7 77 aa4.5□□□□□ -1.69
PUDP-206ENST00000540122 H7BZZ5 65 aa4.49□□□□□ -1.69
PUDP-206ENST00000540122 SNURFQ9Y675 71 aa4.48□□□□□ -1.69
PUDP-206ENST00000540122 SMIM26A0A096LP01 95 aa4.44□□□□□ -1.7
PUDP-206ENST00000540122 A0A0A0MQY5 61 aa4.38□□□□□ -1.71
PUDP-206ENST00000540122 A0A1B0GU33 70 aa4.38□□□□□ -1.71
PUDP-206ENST00000540122 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.37□□□□□ -1.71
PUDP-206ENST00000540122 SEC61GP60059 68 aa4.36□□□□□ -1.71
PUDP-206ENST00000540122 SPANXA2-OT1Q8N9U9 137 aa4.33□□□□□ -1.72
PUDP-206ENST00000540122 V9GYY9 64 aa4.31□□□□□ -1.72
PUDP-206ENST00000540122 A8MU10 97 aa4.27□□□□□ -1.73
PUDP-206ENST00000540122 Q1T7F1 81 aa4.26□□□□□ -1.73
PUDP-206ENST00000540122 LCE1EQ5T753 118 aa4.26□□□□□ -1.73
PUDP-206ENST00000540122 KRTAP25-1Q3LHN0 102 aa4.25□□□□□ -1.73
PUDP-206ENST00000540122 LCE3CQ5T5A8 94 aa4.25□□□□□ -1.73
PUDP-206ENST00000540122 PRO0628Q9UI54 55 aa4.25□□□□□ -1.73
PUDP-206ENST00000540122 MT3P25713 68 aa4.2□□□□□ -1.74
PUDP-206ENST00000540122 BRK1Q8WUW1 75 aa4.2□□□□□ -1.74
PUDP-206ENST00000540122 COA5Q86WW8 74 aa4.17□□□□□ -1.74
PUDP-206ENST00000540122 PSPHP1O15172 72 aa4.14□□□□□ -1.75
PUDP-206ENST00000540122 LCE1FQ5T754 118 aa4.13□□□□□ -1.75
PUDP-206ENST00000540122 PRR15LQ9BU68 103 aa4.13□□□□□ -1.75
PUDP-206ENST00000540122 LINC01558Q9Y6Z2 57 aa4.1□□□□□ -1.75
PUDP-206ENST00000540122 A6NED7 52 aa4.07□□□□□ -1.76
PUDP-206ENST00000540122 KRTAP9-6A8MVA2 160 aa4.07□□□□□ -1.76
PUDP-206ENST00000540122 CDC42SE1Q9NRR8 79 aa4.02□□□□□ -1.77
PUDP-206ENST00000540122 PMAIP1Q13794 54 aa4□□□□□ -1.77
PUDP-206ENST00000540122 A0A1B0GU69 56 aa3.98□□□□□ -1.77
PUDP-206ENST00000540122 UQCR11O14957 56 aa3.93□□□□□ -1.78
PUDP-206ENST00000540122 LCE1BQ5T7P3 118 aa3.91□□□□□ -1.78
PUDP-206ENST00000540122 KTN1-AS1Q86SY8 53 aa3.91□□□□□ -1.78
PUDP-206ENST00000540122 MIR22HGQ0VDD5 57 aa3.88□□□□□ -1.79
PUDP-206ENST00000540122 LCE1CQ5T751 118 aa3.77□□□□□ -1.81
PUDP-206ENST00000540122 K7ERS5 55 aa3.76□□□□□ -1.81
PUDP-206ENST00000540122 KRTAP4-4Q9BYR3 166 aa3.71□□□□□ -1.82
PUDP-206ENST00000540122 PHGR1C9JFL3 82 aa3.66□□□□□ -1.82
PUDP-206ENST00000540122 PRAC1Q96KF2 57 aa3.64□□□□□ -1.83
PUDP-206ENST00000540122 LCE3EQ5T5B0 92 aa3.57□□□□□ -1.84
PUDP-206ENST00000540122 ROMO1P60602 79 aa3.56□□□□□ -1.84
PUDP-206ENST00000540122 NDUFAF8A1L188 74 aa3.47□□□□□ -1.85
PUDP-206ENST00000540122 LUZP6Q538Z0 58 aa3.06□□□□□ -1.92
PUDP-206ENST00000540122 KRTAP21-2Q3LI59 83 aa3.04□□□□□ -1.92
PUDP-206ENST00000540122 MUC19Q7Z5P9 8384 aa3.02□□□□□ -1.93
PUDP-206ENST00000540122 LCE3DQ9BYE3 92 aa2.89□□□□□ -1.95
PUDP-206ENST00000540122 KRTAP21-1Q3LI58 79 aa2.78□□□□□ -1.96
PUDP-206ENST00000540122 INE1O15225 51 aa2.62□□□□□ -1.99
PUDP-206ENST00000540122 MUC16Q8WXI7 14507 aa2.09□□□□□ -2.08
PUDP-206ENST00000540122 PRM1P04553 51 aa1.84□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 189.7 ms