RNA–Protein interactions for RNA: ENST00000539463.1

DENR-204, Transcript of density regulated re-initiation and release factor, humanhuman

TSL 2

Gene DENR, Length 671 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENR-204ENST00000539463 KRTAP4-9Q9BYQ8 210 aa9.06□□□□□ -0.96
DENR-204ENST00000539463 MIR22HGQ0VDD5 57 aa8.98□□□□□ -0.97
DENR-204ENST00000539463 KRTAP4-3Q9BYR4 195 aa8.95□□□□□ -0.98
DENR-204ENST00000539463 KRTAP12-3P60328 96 aa8.92□□□□□ -0.98
DENR-204ENST00000539463 LCE1DQ5T752 114 aa8.85□□□□□ -0.99
DENR-204ENST00000539463 LCE4AQ5TA78 99 aa8.85□□□□□ -0.99
DENR-204ENST00000539463 V9GYY9 64 aa8.84□□□□□ -0.99
DENR-204ENST00000539463 PSPHP1O15172 72 aa8.83□□□□□ -1
DENR-204ENST00000539463 Q1T7F1 81 aa8.8□□□□□ -1
DENR-204ENST00000539463 KRTAP25-1Q3LHN0 102 aa8.8□□□□□ -1
DENR-204ENST00000539463 K7ERS5 55 aa8.78□□□□□ -1
DENR-204ENST00000539463 KRTAP4-7Q9BYR0 210 aa8.77□□□□□ -1.01
DENR-204ENST00000539463 MT4P47944 62 aa8.75□□□□□ -1.01
DENR-204ENST00000539463 KRTAP5-4Q6L8H1 288 aa8.71□□□□□ -1.02
DENR-204ENST00000539463 HMCN1Q96RW7 5635 aa8.69□□□□□ -1.02
DENR-204ENST00000539463 GPR98Q8WXG9 6306 aa8.68□□□□□ -1.02
DENR-204ENST00000539463 KRTAP4-6Q9BYQ5 205 aa8.53□□□□□ -1.04
DENR-204ENST00000539463 A6NED7 52 aa8.51□□□□□ -1.05
DENR-204ENST00000539463 KRTAP23-1A1A580 65 aa8.48□□□□□ -1.05
DENR-204ENST00000539463 KRTAP19-4Q3LI73 84 aa8.41□□□□□ -1.06
DENR-204ENST00000539463 KRTAP5-5Q701N2 237 aaPredicted RBP8.4□□□□□ -1.06
DENR-204ENST00000539463 RPS28P62857 69 aaKnown RBP8.34□□□□□ -1.07
DENR-204ENST00000539463 KRTAP15-1Q3LI76 137 aa8.34□□□□□ -1.07
DENR-204ENST00000539463 SVIPQ8NHG7 77 aa8.33□□□□□ -1.08
DENR-204ENST00000539463 CDC42SE1Q9NRR8 79 aa8.33□□□□□ -1.08
DENR-204ENST00000539463 AHNAK2Q8IVF2 5795 aa8.31□□□□□ -1.08
DENR-204ENST00000539463 LOC100996750A0A140TA64 210 aa8.3□□□□□ -1.08
DENR-204ENST00000539463 LCE3CQ5T5A8 94 aa8.22□□□□□ -1.09
DENR-204ENST00000539463 ROMO1P60602 79 aa8.21□□□□□ -1.1
DENR-204ENST00000539463 KRTAP20-2Q3LI61 65 aa8.21□□□□□ -1.1
DENR-204ENST00000539463 KRTAP5-10Q6L8G5 202 aa8.2□□□□□ -1.1
DENR-204ENST00000539463 SPRR5A0A1B0GTR4 108 aa8.18□□□□□ -1.1
DENR-204ENST00000539463 KRTAP12-4P60329 112 aa8.15□□□□□ -1.1
DENR-204ENST00000539463 KRTAP5-3Q6L8H2 238 aa8.02□□□□□ -1.13
DENR-204ENST00000539463 SYNE1Q8NF91 8797 aaKnown RBP8□□□□□ -1.13
DENR-204ENST00000539463 KRTAP5-7Q6L8G8 165 aa7.87□□□□□ -1.15
DENR-204ENST00000539463 MT1AP04731 61 aa7.82□□□□□ -1.16
DENR-204ENST00000539463 KRTAP6-1Q3LI64 71 aa7.78□□□□□ -1.16
DENR-204ENST00000539463 KRTAP9-6A8MVA2 160 aa7.77□□□□□ -1.17
DENR-204ENST00000539463 KRTAP5-2Q701N4 177 aa7.64□□□□□ -1.19
DENR-204ENST00000539463 KRTAP9-4Q9BYQ2 154 aa7.57□□□□□ -1.2
DENR-204ENST00000539463 KRTAP4-11Q9BYQ6 195 aa7.49□□□□□ -1.21
DENR-204ENST00000539463 KRTAP6-2Q3LI66 62 aa7.43□□□□□ -1.22
DENR-204ENST00000539463 PRO0628Q9UI54 55 aa7.36□□□□□ -1.23
DENR-204ENST00000539463 BRK1Q8WUW1 75 aa7.29□□□□□ -1.24
DENR-204ENST00000539463 KRTAP5-8O75690 187 aa7.24□□□□□ -1.25
DENR-204ENST00000539463 H3BS24 57 aa7.17□□□□□ -1.26
DENR-204ENST00000539463 MT3P25713 68 aa7.15□□□□□ -1.26
DENR-204ENST00000539463 OBSCNQ5VST9 7968 aa7.02□□□□□ -1.28
DENR-204ENST00000539463 PMAIP1Q13794 54 aa6.91□□□□□ -1.3
DENR-204ENST00000539463 KRTAP5-1Q6L8H4 278 aa6.84□□□□□ -1.31
DENR-204ENST00000539463 KRTAP9-9Q9BYP9 154 aa6.84□□□□□ -1.31
DENR-204ENST00000539463 MUC5BQ9HC84 5762 aaPredicted RBP6.82□□□□□ -1.32
DENR-204ENST00000539463 MUC5ACP98088 5654 aa6.82□□□□□ -1.32
DENR-204ENST00000539463 AHNAKQ09666 5890 aaKnown RBP6.78□□□□□ -1.32
DENR-204ENST00000539463 KTN1-AS1Q86SY8 53 aa6.77□□□□□ -1.33
DENR-204ENST00000539463 PRAC1Q96KF2 57 aa6.64□□□□□ -1.35
DENR-204ENST00000539463 LCE1EQ5T753 118 aa6.57□□□□□ -1.36
DENR-204ENST00000539463 A0A0A0MQY5 61 aa6.39□□□□□ -1.39
DENR-204ENST00000539463 KRTAP4-2Q9BYR5 136 aa6.2□□□□□ -1.42
DENR-204ENST00000539463 LCE1BQ5T7P3 118 aa6.17□□□□□ -1.42
DENR-204ENST00000539463 LCE1CQ5T751 118 aa6.09□□□□□ -1.43
DENR-204ENST00000539463 KRTAP4-12Q9BQ66 201 aa5.94□□□□□ -1.46
DENR-204ENST00000539463 LCE3DQ9BYE3 92 aa5.93□□□□□ -1.46
DENR-204ENST00000539463 LUZP6Q538Z0 58 aa5.57□□□□□ -1.52
DENR-204ENST00000539463 LCE3EQ5T5B0 92 aa5.57□□□□□ -1.52
DENR-204ENST00000539463 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.55□□□□□ -1.52
DENR-204ENST00000539463 KRTAP5-11Q6L8G4 156 aa5.51□□□□□ -1.53
DENR-204ENST00000539463 LCE1FQ5T754 118 aa5.35□□□□□ -1.55
DENR-204ENST00000539463 NDUFAF8A1L188 74 aa5.26□□□□□ -1.57
DENR-204ENST00000539463 KRTAP21-2Q3LI59 83 aa5.13□□□□□ -1.59
DENR-204ENST00000539463 PHGR1C9JFL3 82 aa4.77□□□□□ -1.65
DENR-204ENST00000539463 KRTAP4-4Q9BYR3 166 aa4.69□□□□□ -1.66
DENR-204ENST00000539463 INE1O15225 51 aa4.45□□□□□ -1.7
DENR-204ENST00000539463 MUC19Q7Z5P9 8384 aa4.32□□□□□ -1.72
DENR-204ENST00000539463 PRM1P04553 51 aa4.2□□□□□ -1.74
DENR-204ENST00000539463 KRTAP21-1Q3LI58 79 aa3.61□□□□□ -1.83
DENR-204ENST00000539463 MUC16Q8WXI7 14507 aa3.11□□□□□ -1.91
Retrieved 78 of 20,778 RNA–protein pairs in 114.4 ms