RNA–Protein interactions for RNA: ENST00000539399.1

TM7SF3-207, Transcript of transmembrane 7 superfamily member 3, humanhuman

TSL 4

Gene TM7SF3, Length 553 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM7SF3-207ENST00000539399 PSPHP1O15172 72 aa8.99□□□□□ -0.97
TM7SF3-207ENST00000539399 MIR22HGQ0VDD5 57 aa8.97□□□□□ -0.97
TM7SF3-207ENST00000539399 LCE1DQ5T752 114 aa8.97□□□□□ -0.97
TM7SF3-207ENST00000539399 PCP4P48539 62 aa8.95□□□□□ -0.98
TM7SF3-207ENST00000539399 Q1T7F1 81 aa8.95□□□□□ -0.98
TM7SF3-207ENST00000539399 MT1MQ8N339 61 aa8.91□□□□□ -0.98
TM7SF3-207ENST00000539399 MT1LQ93083 61 aa8.89□□□□□ -0.99
TM7SF3-207ENST00000539399 LCE4AQ5TA78 99 aa8.84□□□□□ -0.99
TM7SF3-207ENST00000539399 MT4P47944 62 aa8.83□□□□□ -1
TM7SF3-207ENST00000539399 HMCN1Q96RW7 5635 aa8.82□□□□□ -1
TM7SF3-207ENST00000539399 K7ERS5 55 aa8.77□□□□□ -1.01
TM7SF3-207ENST00000539399 KRTAP4-3Q9BYR4 195 aa8.75□□□□□ -1.01
TM7SF3-207ENST00000539399 RPS28P62857 69 aaKnown RBP8.73□□□□□ -1.01
TM7SF3-207ENST00000539399 A6NED7 52 aa8.7□□□□□ -1.02
TM7SF3-207ENST00000539399 KRTAP12-3P60328 96 aa8.69□□□□□ -1.02
TM7SF3-207ENST00000539399 KRTAP25-1Q3LHN0 102 aa8.67□□□□□ -1.02
TM7SF3-207ENST00000539399 KRTAP5-4Q6L8H1 288 aa8.65□□□□□ -1.02
TM7SF3-207ENST00000539399 AHNAK2Q8IVF2 5795 aa8.61□□□□□ -1.03
TM7SF3-207ENST00000539399 KRTAP4-6Q9BYQ5 205 aa8.56□□□□□ -1.04
TM7SF3-207ENST00000539399 KRTAP5-10Q6L8G5 202 aa8.47□□□□□ -1.05
TM7SF3-207ENST00000539399 KRTAP4-7Q9BYR0 210 aa8.46□□□□□ -1.06
TM7SF3-207ENST00000539399 KRTAP23-1A1A580 65 aa8.34□□□□□ -1.07
TM7SF3-207ENST00000539399 CDC42SE1Q9NRR8 79 aa8.31□□□□□ -1.08
TM7SF3-207ENST00000539399 KRTAP19-4Q3LI73 84 aa8.27□□□□□ -1.09
TM7SF3-207ENST00000539399 ROMO1P60602 79 aa8.2□□□□□ -1.1
TM7SF3-207ENST00000539399 KRTAP5-3Q6L8H2 238 aa8.2□□□□□ -1.1
TM7SF3-207ENST00000539399 KRTAP5-5Q701N2 237 aaPredicted RBP8.2□□□□□ -1.1
TM7SF3-207ENST00000539399 KRTAP20-2Q3LI61 65 aa8.19□□□□□ -1.1
TM7SF3-207ENST00000539399 KRTAP5-7Q6L8G8 165 aa8.17□□□□□ -1.1
TM7SF3-207ENST00000539399 KRTAP15-1Q3LI76 137 aa8.14□□□□□ -1.11
TM7SF3-207ENST00000539399 SPRR5A0A1B0GTR4 108 aa8.09□□□□□ -1.11
TM7SF3-207ENST00000539399 LOC100996750A0A140TA64 210 aa8.03□□□□□ -1.12
TM7SF3-207ENST00000539399 KRTAP12-4P60329 112 aa8.02□□□□□ -1.13
TM7SF3-207ENST00000539399 LCE3CQ5T5A8 94 aa7.99□□□□□ -1.13
TM7SF3-207ENST00000539399 SYNE1Q8NF91 8797 aaKnown RBP7.83□□□□□ -1.16
TM7SF3-207ENST00000539399 BRK1Q8WUW1 75 aa7.79□□□□□ -1.16
TM7SF3-207ENST00000539399 MT1AP04731 61 aa7.59□□□□□ -1.19
TM7SF3-207ENST00000539399 KRTAP4-11Q9BYQ6 195 aa7.55□□□□□ -1.2
TM7SF3-207ENST00000539399 KRTAP5-2Q701N4 177 aa7.54□□□□□ -1.2
TM7SF3-207ENST00000539399 KRTAP6-1Q3LI64 71 aa7.53□□□□□ -1.2
TM7SF3-207ENST00000539399 KRTAP9-6A8MVA2 160 aa7.46□□□□□ -1.22
TM7SF3-207ENST00000539399 PMAIP1Q13794 54 aa7.33□□□□□ -1.24
TM7SF3-207ENST00000539399 KRTAP5-8O75690 187 aa7.31□□□□□ -1.24
TM7SF3-207ENST00000539399 KRTAP9-4Q9BYQ2 154 aa7.31□□□□□ -1.24
TM7SF3-207ENST00000539399 KRTAP6-2Q3LI66 62 aa7.25□□□□□ -1.25
TM7SF3-207ENST00000539399 MUC5ACP98088 5654 aa7.13□□□□□ -1.27
TM7SF3-207ENST00000539399 AHNAKQ09666 5890 aaKnown RBP7.11□□□□□ -1.27
TM7SF3-207ENST00000539399 MUC5BQ9HC84 5762 aaPredicted RBP7.08□□□□□ -1.28
TM7SF3-207ENST00000539399 OBSCNQ5VST9 7968 aa7.05□□□□□ -1.28
TM7SF3-207ENST00000539399 PRAC1Q96KF2 57 aa7.03□□□□□ -1.28
TM7SF3-207ENST00000539399 MT3P25713 68 aa6.96□□□□□ -1.3
TM7SF3-207ENST00000539399 KRTAP9-9Q9BYP9 154 aa6.96□□□□□ -1.3
TM7SF3-207ENST00000539399 PRO0628Q9UI54 55 aa6.96□□□□□ -1.3
TM7SF3-207ENST00000539399 KRTAP5-1Q6L8H4 278 aa6.81□□□□□ -1.32
TM7SF3-207ENST00000539399 KTN1-AS1Q86SY8 53 aa6.61□□□□□ -1.35
TM7SF3-207ENST00000539399 SVIPQ8NHG7 77 aa6.4□□□□□ -1.38
TM7SF3-207ENST00000539399 LCE1EQ5T753 118 aa6.38□□□□□ -1.39
TM7SF3-207ENST00000539399 KRTAP4-2Q9BYR5 136 aa6.1□□□□□ -1.43
TM7SF3-207ENST00000539399 LCE1BQ5T7P3 118 aa6.07□□□□□ -1.44
TM7SF3-207ENST00000539399 LCE1CQ5T751 118 aa5.94□□□□□ -1.46
TM7SF3-207ENST00000539399 LUZP6Q538Z0 58 aa5.88□□□□□ -1.47
TM7SF3-207ENST00000539399 LCE3DQ9BYE3 92 aa5.8□□□□□ -1.48
TM7SF3-207ENST00000539399 KRTAP4-12Q9BQ66 201 aa5.66□□□□□ -1.5
TM7SF3-207ENST00000539399 LCE3EQ5T5B0 92 aa5.46□□□□□ -1.54
TM7SF3-207ENST00000539399 KRTAP5-11Q6L8G4 156 aa5.41□□□□□ -1.54
TM7SF3-207ENST00000539399 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.38□□□□□ -1.55
TM7SF3-207ENST00000539399 LCE1FQ5T754 118 aa5.3□□□□□ -1.56
TM7SF3-207ENST00000539399 NDUFAF8A1L188 74 aa4.98□□□□□ -1.61
TM7SF3-207ENST00000539399 KRTAP21-2Q3LI59 83 aa4.96□□□□□ -1.62
TM7SF3-207ENST00000539399 PHGR1C9JFL3 82 aa4.94□□□□□ -1.62
TM7SF3-207ENST00000539399 H3BS24 57 aa4.74□□□□□ -1.65
TM7SF3-207ENST00000539399 KRTAP4-4Q9BYR3 166 aa4.61□□□□□ -1.67
TM7SF3-207ENST00000539399 MUC19Q7Z5P9 8384 aa4.35□□□□□ -1.71
TM7SF3-207ENST00000539399 PRM1P04553 51 aa4.23□□□□□ -1.73
TM7SF3-207ENST00000539399 A0A0A0MQY5 61 aa4.04□□□□□ -1.76
TM7SF3-207ENST00000539399 INE1O15225 51 aa3.98□□□□□ -1.77
TM7SF3-207ENST00000539399 KRTAP21-1Q3LI58 79 aa3.74□□□□□ -1.81
TM7SF3-207ENST00000539399 MUC16Q8WXI7 14507 aa3.11□□□□□ -1.91
Retrieved 78 of 20,778 RNA–protein pairs in 12.8 ms