RNA–Protein interactions for RNA: ENST00000537965.5

SNHG1-207, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-207ENST00000537965 SPTSSBQ8NFR3 76 aa2.02□□□□□ -2.09
SNHG1-207ENST00000537965 DSTQ03001 7570 aaKnown RBP2.01□□□□□ -2.09
SNHG1-207ENST00000537965 DMAC1Q96GE9 116 aa2.01□□□□□ -2.09
SNHG1-207ENST00000537965 TRAV7A0A075B6U4 112 aa2□□□□□ -2.09
SNHG1-207ENST00000537965 KRTAP19-3Q7Z4W3 81 aa2□□□□□ -2.09
SNHG1-207ENST00000537965 ANAPC13Q9BS18 74 aa2□□□□□ -2.09
SNHG1-207ENST00000537965 ACYP2P14621 99 aa1.99□□□□□ -2.09
SNHG1-207ENST00000537965 GPR98Q8WXG9 6306 aa1.99□□□□□ -2.09
SNHG1-207ENST00000537965 SPINT4Q6UDR6 99 aa1.98□□□□□ -2.09
SNHG1-207ENST00000537965 CYSTM1Q9H1C7 97 aa1.98□□□□□ -2.09
SNHG1-207ENST00000537965 MT1GP13640 62 aa1.97□□□□□ -2.09
SNHG1-207ENST00000537965 LINC00643Q86TS7 51 aa1.97□□□□□ -2.09
SNHG1-207ENST00000537965 MT1EP04732 61 aa1.96□□□□□ -2.1
SNHG1-207ENST00000537965 KRTAP19-7Q3SYF9 63 aa1.96□□□□□ -2.1
SNHG1-207ENST00000537965 SPRR5A0A1B0GTR4 108 aa1.95□□□□□ -2.1
SNHG1-207ENST00000537965 MT4P47944 62 aa1.95□□□□□ -2.1
SNHG1-207ENST00000537965 CHKB-CPT1BH3BT56 60 aa1.94□□□□□ -2.1
SNHG1-207ENST00000537965 K7ERS5 55 aa1.94□□□□□ -2.1
SNHG1-207ENST00000537965 SCGB1A1P11684 91 aa1.94□□□□□ -2.1
SNHG1-207ENST00000537965 LOC105371267A0A1B0GV96 52 aa1.92□□□□□ -2.1
SNHG1-207ENST00000537965 KRTAP5-10Q6L8G5 202 aa1.92□□□□□ -2.1
SNHG1-207ENST00000537965 A0A0D9SG42 100 aa1.91□□□□□ -2.1
SNHG1-207ENST00000537965 AHNAK2Q8IVF2 5795 aa1.89□□□□□ -2.11
SNHG1-207ENST00000537965 HMCN1Q96RW7 5635 aa1.89□□□□□ -2.11
SNHG1-207ENST00000537965 KRTAP5-7Q6L8G8 165 aa1.89□□□□□ -2.11
SNHG1-207ENST00000537965 KRTAP19-5Q3LI72 72 aa1.88□□□□□ -2.11
SNHG1-207ENST00000537965 MT1MQ8N339 61 aa1.88□□□□□ -2.11
SNHG1-207ENST00000537965 SMIM20Q8N5G0 67 aa1.87□□□□□ -2.11
SNHG1-207ENST00000537965 KRTAP13-4Q3LI77 160 aa1.86□□□□□ -2.11
SNHG1-207ENST00000537965 A6NED7 52 aa1.85□□□□□ -2.11
SNHG1-207ENST00000537965 J3QR89 54 aa1.85□□□□□ -2.11
SNHG1-207ENST00000537965 MT1LQ93083 61 aa1.85□□□□□ -2.11
SNHG1-207ENST00000537965 SERP1Q9Y6X1 66 aa1.85□□□□□ -2.11
SNHG1-207ENST00000537965 KRTAP25-1Q3LHN0 102 aa1.82□□□□□ -2.12
SNHG1-207ENST00000537965 MUC19Q7Z5P9 8384 aa1.81□□□□□ -2.12
SNHG1-207ENST00000537965 A0A1B0GU33 70 aa1.81□□□□□ -2.12
SNHG1-207ENST00000537965 TNP1P09430 55 aa1.8□□□□□ -2.12
SNHG1-207ENST00000537965 C10orf95Q9H7T3 257 aa1.8□□□□□ -2.12
SNHG1-207ENST00000537965 KRTAP12-4P60329 112 aa1.79□□□□□ -2.12
SNHG1-207ENST00000537965 KRTAP20-2Q3LI61 65 aa1.79□□□□□ -2.12
SNHG1-207ENST00000537965 SPATA8Q6RVD6 105 aa1.79□□□□□ -2.12
SNHG1-207ENST00000537965 KRTAP12-1P59990 96 aa1.78□□□□□ -2.12
SNHG1-207ENST00000537965 SNURFQ9Y675 71 aa1.77□□□□□ -2.13
SNHG1-207ENST00000537965 COA5Q86WW8 74 aa1.75□□□□□ -2.13
SNHG1-207ENST00000537965 KRTAP12-3P60328 96 aa1.73□□□□□ -2.13
SNHG1-207ENST00000537965 A0A1B0GV90 55 aa1.72□□□□□ -2.13
SNHG1-207ENST00000537965 SERP2Q8N6R1 65 aa1.71□□□□□ -2.14
SNHG1-207ENST00000537965 A0A1B0GU69 56 aa1.7□□□□□ -2.14
SNHG1-207ENST00000537965 K7ERU9 68 aa1.67□□□□□ -2.14
SNHG1-207ENST00000537965 PMAIP1Q13794 54 aa1.67□□□□□ -2.14
SNHG1-207ENST00000537965 PRR15LQ9BU68 103 aa1.64□□□□□ -2.15
SNHG1-207ENST00000537965 SYNE1Q8NF91 8797 aaKnown RBP1.6□□□□□ -2.15
SNHG1-207ENST00000537965 H7BZZ5 65 aa1.6□□□□□ -2.15
SNHG1-207ENST00000537965 COX7CP15954 63 aa1.6□□□□□ -2.15
SNHG1-207ENST00000537965 MT1AP04731 61 aa1.59□□□□□ -2.15
SNHG1-207ENST00000537965 KRTAP21-2Q3LI59 83 aa1.59□□□□□ -2.15
SNHG1-207ENST00000537965 AHNAKQ09666 5890 aaKnown RBP1.57□□□□□ -2.16
SNHG1-207ENST00000537965 MUC5ACP98088 5654 aa1.57□□□□□ -2.16
SNHG1-207ENST00000537965 KRTAP6-1Q3LI64 71 aa1.57□□□□□ -2.16
SNHG1-207ENST00000537965 UQCR11O14957 56 aa1.56□□□□□ -2.16
SNHG1-207ENST00000537965 MUC5BQ9HC84 5762 aaPredicted RBP1.54□□□□□ -2.16
SNHG1-207ENST00000537965 TMEM258P61165 79 aa1.53□□□□□ -2.16
SNHG1-207ENST00000537965 KRTAP6-2Q3LI66 62 aa1.53□□□□□ -2.16
SNHG1-207ENST00000537965 LINC01558Q9Y6Z2 57 aa1.53□□□□□ -2.16
SNHG1-207ENST00000537965 ATP5EP56381 51 aaPredicted RBP1.51□□□□□ -2.17
SNHG1-207ENST00000537965 KTN1-AS1Q86SY8 53 aa1.51□□□□□ -2.17
SNHG1-207ENST00000537965 RPS28P62857 69 aaKnown RBP1.49□□□□□ -2.17
SNHG1-207ENST00000537965 MIR22HGQ0VDD5 57 aa1.49□□□□□ -2.17
SNHG1-207ENST00000537965 BRK1Q8WUW1 75 aa1.44□□□□□ -2.18
SNHG1-207ENST00000537965 CCDC179H3BU77 68 aa1.41□□□□□ -2.18
SNHG1-207ENST00000537965 Q1T7F1 81 aa1.41□□□□□ -2.18
SNHG1-207ENST00000537965 CDC42SE1Q9NRR8 79 aa1.41□□□□□ -2.18
SNHG1-207ENST00000537965 ROMO1P60602 79 aa1.36□□□□□ -2.19
SNHG1-207ENST00000537965 INE1O15225 51 aa1.18□□□□□ -2.22
SNHG1-207ENST00000537965 PHGR1C9JFL3 82 aa1.13□□□□□ -2.23
SNHG1-207ENST00000537965 KRTAP21-1Q3LI58 79 aa0.89□□□□□ -2.27
SNHG1-207ENST00000537965 MUC16Q8WXI7 14507 aa0.76□□□□□ -2.29
SNHG1-207ENST00000537965 PRM1P04553 51 aa0.66□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 99.8 ms