RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 SPANXA2-OT1Q8N9U9 137 aa3.66□□□□□ -1.82
CHD4-207ENST00000537634 KRTAP19-7Q3SYF9 63 aa3.63□□□□□ -1.83
CHD4-207ENST00000537634 MT1EP04732 61 aa3.62□□□□□ -1.83
CHD4-207ENST00000537634 Q1T7F1 81 aa3.62□□□□□ -1.83
CHD4-207ENST00000537634 KRTAP19-3Q7Z4W3 81 aa3.61□□□□□ -1.83
CHD4-207ENST00000537634 PRAC1Q96KF2 57 aa3.6□□□□□ -1.83
CHD4-207ENST00000537634 A0A0D9SG42 100 aa3.59□□□□□ -1.83
CHD4-207ENST00000537634 DSTQ03001 7570 aaKnown RBP3.57□□□□□ -1.84
CHD4-207ENST00000537634 COA5Q86WW8 74 aa3.57□□□□□ -1.84
CHD4-207ENST00000537634 PSPHP1O15172 72 aa3.55□□□□□ -1.84
CHD4-207ENST00000537634 SPATA8Q6RVD6 105 aa3.54□□□□□ -1.84
CHD4-207ENST00000537634 SPINT4Q6UDR6 99 aa3.54□□□□□ -1.84
CHD4-207ENST00000537634 A8MU10 97 aa3.52□□□□□ -1.85
CHD4-207ENST00000537634 KRTAP19-5Q3LI72 72 aa3.52□□□□□ -1.85
CHD4-207ENST00000537634 A0A1B0GU33 70 aa3.51□□□□□ -1.85
CHD4-207ENST00000537634 MT1GP13640 62 aa3.51□□□□□ -1.85
CHD4-207ENST00000537634 PP632Q6XCG6 107 aa3.51□□□□□ -1.85
CHD4-207ENST00000537634 GPR98Q8WXG9 6306 aa3.51□□□□□ -1.85
CHD4-207ENST00000537634 KRTAP12-1P59990 96 aa3.49□□□□□ -1.85
CHD4-207ENST00000537634 MT1MQ8N339 61 aa3.45□□□□□ -1.86
CHD4-207ENST00000537634 MT4P47944 62 aa3.44□□□□□ -1.86
CHD4-207ENST00000537634 MT1LQ93083 61 aa3.44□□□□□ -1.86
CHD4-207ENST00000537634 CDC42SE1Q9NRR8 79 aa3.43□□□□□ -1.86
CHD4-207ENST00000537634 A0A1B0GU69 56 aa3.4□□□□□ -1.87
CHD4-207ENST00000537634 LCE3AQ5TA76 89 aa3.39□□□□□ -1.87
CHD4-207ENST00000537634 C10orf95Q9H7T3 257 aa3.39□□□□□ -1.87
CHD4-207ENST00000537634 TNP1P09430 55 aa3.38□□□□□ -1.87
CHD4-207ENST00000537634 KRTAP4-3Q9BYR4 195 aa3.37□□□□□ -1.87
CHD4-207ENST00000537634 KRTAP5-4Q6L8H1 288 aa3.35□□□□□ -1.87
CHD4-207ENST00000537634 PRR15LQ9BU68 103 aa3.34□□□□□ -1.87
CHD4-207ENST00000537634 HMCN1Q96RW7 5635 aa3.33□□□□□ -1.88
CHD4-207ENST00000537634 A6NED7 52 aa3.32□□□□□ -1.88
CHD4-207ENST00000537634 LINC01558Q9Y6Z2 57 aa3.3□□□□□ -1.88
CHD4-207ENST00000537634 KRTAP5-10Q6L8G5 202 aa3.29□□□□□ -1.88
CHD4-207ENST00000537634 K7ERS5 55 aa3.27□□□□□ -1.89
CHD4-207ENST00000537634 KRTAP12-3P60328 96 aa3.26□□□□□ -1.89
CHD4-207ENST00000537634 LUZP6Q538Z0 58 aa3.26□□□□□ -1.89
CHD4-207ENST00000537634 AHNAK2Q8IVF2 5795 aa3.25□□□□□ -1.89
CHD4-207ENST00000537634 ROMO1P60602 79 aa3.24□□□□□ -1.89
CHD4-207ENST00000537634 NDUFAF8A1L188 74 aa3.18□□□□□ -1.9
CHD4-207ENST00000537634 KRTAP20-2Q3LI61 65 aa3.18□□□□□ -1.9
CHD4-207ENST00000537634 KRTAP5-7Q6L8G8 165 aa3.18□□□□□ -1.9
CHD4-207ENST00000537634 KRTAP5-5Q701N2 237 aaPredicted RBP3.16□□□□□ -1.9
CHD4-207ENST00000537634 SPRR5A0A1B0GTR4 108 aa3.15□□□□□ -1.91
CHD4-207ENST00000537634 UQCR11O14957 56 aa3.15□□□□□ -1.91
CHD4-207ENST00000537634 KRTAP12-4P60329 112 aa3.14□□□□□ -1.91
CHD4-207ENST00000537634 MIR22HGQ0VDD5 57 aa3.13□□□□□ -1.91
CHD4-207ENST00000537634 KRTAP25-1Q3LHN0 102 aa3.13□□□□□ -1.91
CHD4-207ENST00000537634 SYNE1Q8NF91 8797 aaKnown RBP2.98□□□□□ -1.93
CHD4-207ENST00000537634 LCE3CQ5T5A8 94 aa2.98□□□□□ -1.93
CHD4-207ENST00000537634 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.97□□□□□ -1.93
CHD4-207ENST00000537634 MT1AP04731 61 aa2.92□□□□□ -1.94
CHD4-207ENST00000537634 KRTAP5-11Q6L8G4 156 aa2.92□□□□□ -1.94
CHD4-207ENST00000537634 KRTAP6-1Q3LI64 71 aa2.91□□□□□ -1.94
CHD4-207ENST00000537634 KRTAP5-2Q701N4 177 aa2.91□□□□□ -1.94
CHD4-207ENST00000537634 LCE1EQ5T753 118 aa2.9□□□□□ -1.95
CHD4-207ENST00000537634 MT3P25713 68 aa2.87□□□□□ -1.95
CHD4-207ENST00000537634 KRTAP5-8O75690 187 aa2.83□□□□□ -1.96
CHD4-207ENST00000537634 KRTAP6-2Q3LI66 62 aa2.81□□□□□ -1.96
CHD4-207ENST00000537634 KRTAP9-6A8MVA2 160 aa2.8□□□□□ -1.96
CHD4-207ENST00000537634 MUC5ACP98088 5654 aa2.73□□□□□ -1.97
CHD4-207ENST00000537634 OBSCNQ5VST9 7968 aa2.7□□□□□ -1.98
CHD4-207ENST00000537634 AHNAKQ09666 5890 aaKnown RBP2.68□□□□□ -1.98
CHD4-207ENST00000537634 MUC5BQ9HC84 5762 aaPredicted RBP2.67□□□□□ -1.98
CHD4-207ENST00000537634 KRTAP5-1Q6L8H4 278 aa2.63□□□□□ -1.99
CHD4-207ENST00000537634 LCE1FQ5T754 118 aa2.53□□□□□ -2
CHD4-207ENST00000537634 INE1O15225 51 aa2.49□□□□□ -2.01
CHD4-207ENST00000537634 KRTAP4-4Q9BYR3 166 aa2.46□□□□□ -2.02
CHD4-207ENST00000537634 LCE1BQ5T7P3 118 aa2.37□□□□□ -2.03
CHD4-207ENST00000537634 LCE1CQ5T751 118 aa2.31□□□□□ -2.04
CHD4-207ENST00000537634 LCE3EQ5T5B0 92 aa2.17□□□□□ -2.06
CHD4-207ENST00000537634 LCE3DQ9BYE3 92 aa2.13□□□□□ -2.07
CHD4-207ENST00000537634 PHGR1C9JFL3 82 aa1.94□□□□□ -2.1
CHD4-207ENST00000537634 KRTAP21-2Q3LI59 83 aa1.91□□□□□ -2.1
CHD4-207ENST00000537634 MUC19Q7Z5P9 8384 aa1.69□□□□□ -2.14
CHD4-207ENST00000537634 PRM1P04553 51 aa1.51□□□□□ -2.17
CHD4-207ENST00000537634 KRTAP21-1Q3LI58 79 aa1.47□□□□□ -2.17
CHD4-207ENST00000537634 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 75.1 ms