RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 LINC01558Q9Y6Z2 57 aa5.24□□□□□ -1.57
UBE3B-206ENST00000536398 PRR15LQ9BU68 103 aa5.22□□□□□ -1.57
UBE3B-206ENST00000536398 C10orf95Q9H7T3 257 aa5.22□□□□□ -1.57
UBE3B-206ENST00000536398 DSTQ03001 7570 aaKnown RBP5.19□□□□□ -1.58
UBE3B-206ENST00000536398 TMEM258P61165 79 aa5.18□□□□□ -1.58
UBE3B-206ENST00000536398 LCE3AQ5TA76 89 aa5.15□□□□□ -1.59
UBE3B-206ENST00000536398 TNP1P09430 55 aa5.13□□□□□ -1.59
UBE3B-206ENST00000536398 MT1GP13640 62 aa5.12□□□□□ -1.59
UBE3B-206ENST00000536398 MT1LQ93083 61 aa5.08□□□□□ -1.6
UBE3B-206ENST00000536398 UQCR11O14957 56 aa5.07□□□□□ -1.6
UBE3B-206ENST00000536398 MT1MQ8N339 61 aa5.06□□□□□ -1.6
UBE3B-206ENST00000536398 PP632Q6XCG6 107 aa5.03□□□□□ -1.6
UBE3B-206ENST00000536398 KRTAP4-3Q9BYR4 195 aa5□□□□□ -1.61
UBE3B-206ENST00000536398 MIR22HGQ0VDD5 57 aa4.99□□□□□ -1.61
UBE3B-206ENST00000536398 PSPHP1O15172 72 aa4.94□□□□□ -1.62
UBE3B-206ENST00000536398 KRTAP12-3P60328 96 aa4.93□□□□□ -1.62
UBE3B-206ENST00000536398 Q1T7F1 81 aa4.89□□□□□ -1.63
UBE3B-206ENST00000536398 V9GYY9 64 aa4.88□□□□□ -1.63
UBE3B-206ENST00000536398 GPR98Q8WXG9 6306 aa4.85□□□□□ -1.63
UBE3B-206ENST00000536398 MT4P47944 62 aa4.84□□□□□ -1.63
UBE3B-206ENST00000536398 KRTAP25-1Q3LHN0 102 aa4.84□□□□□ -1.63
UBE3B-206ENST00000536398 K7ERS5 55 aa4.82□□□□□ -1.64
UBE3B-206ENST00000536398 HMCN1Q96RW7 5635 aa4.82□□□□□ -1.64
UBE3B-206ENST00000536398 KRTAP5-4Q6L8H1 288 aa4.79□□□□□ -1.64
UBE3B-206ENST00000536398 A6NED7 52 aa4.73□□□□□ -1.65
UBE3B-206ENST00000536398 KRTAP23-1A1A580 65 aa4.65□□□□□ -1.67
UBE3B-206ENST00000536398 AHNAK2Q8IVF2 5795 aa4.64□□□□□ -1.67
UBE3B-206ENST00000536398 RPS28P62857 69 aaKnown RBP4.63□□□□□ -1.67
UBE3B-206ENST00000536398 KRTAP5-5Q701N2 237 aaPredicted RBP4.63□□□□□ -1.67
UBE3B-206ENST00000536398 PCP4P48539 62 aa4.62□□□□□ -1.67
UBE3B-206ENST00000536398 KRTAP15-1Q3LI76 137 aa4.61□□□□□ -1.67
UBE3B-206ENST00000536398 CDC42SE1Q9NRR8 79 aa4.6□□□□□ -1.67
UBE3B-206ENST00000536398 ROMO1P60602 79 aa4.56□□□□□ -1.68
UBE3B-206ENST00000536398 LCE3CQ5T5A8 94 aa4.55□□□□□ -1.68
UBE3B-206ENST00000536398 KRTAP20-2Q3LI61 65 aa4.52□□□□□ -1.69
UBE3B-206ENST00000536398 SYNE1Q8NF91 8797 aaKnown RBP4.49□□□□□ -1.69
UBE3B-206ENST00000536398 KRTAP5-10Q6L8G5 202 aa4.49□□□□□ -1.69
UBE3B-206ENST00000536398 SPRR5A0A1B0GTR4 108 aa4.47□□□□□ -1.69
UBE3B-206ENST00000536398 KRTAP12-4P60329 112 aa4.46□□□□□ -1.7
UBE3B-206ENST00000536398 KRTAP9-6A8MVA2 160 aa4.34□□□□□ -1.71
UBE3B-206ENST00000536398 KRTAP6-1Q3LI64 71 aa4.32□□□□□ -1.72
UBE3B-206ENST00000536398 MT1AP04731 61 aa4.31□□□□□ -1.72
UBE3B-206ENST00000536398 KRTAP5-7Q6L8G8 165 aa4.3□□□□□ -1.72
UBE3B-206ENST00000536398 KRTAP5-2Q701N4 177 aa4.21□□□□□ -1.74
UBE3B-206ENST00000536398 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.13□□□□□ -1.75
UBE3B-206ENST00000536398 KRTAP6-2Q3LI66 62 aa4.12□□□□□ -1.75
UBE3B-206ENST00000536398 BRK1Q8WUW1 75 aa4.09□□□□□ -1.75
UBE3B-206ENST00000536398 KRTAP5-8O75690 187 aa3.99□□□□□ -1.77
UBE3B-206ENST00000536398 KRTAP5-11Q6L8G4 156 aa3.99□□□□□ -1.77
UBE3B-206ENST00000536398 OBSCNQ5VST9 7968 aa3.96□□□□□ -1.78
UBE3B-206ENST00000536398 MT3P25713 68 aa3.93□□□□□ -1.78
UBE3B-206ENST00000536398 SVIPQ8NHG7 77 aa3.88□□□□□ -1.79
UBE3B-206ENST00000536398 PMAIP1Q13794 54 aa3.83□□□□□ -1.8
UBE3B-206ENST00000536398 MUC5BQ9HC84 5762 aaPredicted RBP3.81□□□□□ -1.8
UBE3B-206ENST00000536398 LCE1EQ5T753 118 aa3.79□□□□□ -1.8
UBE3B-206ENST00000536398 AHNAKQ09666 5890 aaKnown RBP3.77□□□□□ -1.81
UBE3B-206ENST00000536398 KRTAP5-1Q6L8H4 278 aa3.77□□□□□ -1.81
UBE3B-206ENST00000536398 PRAC1Q96KF2 57 aa3.76□□□□□ -1.81
UBE3B-206ENST00000536398 MUC5ACP98088 5654 aa3.74□□□□□ -1.81
UBE3B-206ENST00000536398 PRO0628Q9UI54 55 aa3.52□□□□□ -1.85
UBE3B-206ENST00000536398 KRTAP4-4Q9BYR3 166 aa3.44□□□□□ -1.86
UBE3B-206ENST00000536398 LCE1BQ5T7P3 118 aa3.43□□□□□ -1.86
UBE3B-206ENST00000536398 KTN1-AS1Q86SY8 53 aa3.37□□□□□ -1.87
UBE3B-206ENST00000536398 LCE1CQ5T751 118 aa3.33□□□□□ -1.88
UBE3B-206ENST00000536398 LCE3DQ9BYE3 92 aa3.27□□□□□ -1.89
UBE3B-206ENST00000536398 LCE3EQ5T5B0 92 aa3.08□□□□□ -1.92
UBE3B-206ENST00000536398 LUZP6Q538Z0 58 aa3.07□□□□□ -1.92
UBE3B-206ENST00000536398 A0A0A0MQY5 61 aa3.03□□□□□ -1.92
UBE3B-206ENST00000536398 LCE1FQ5T754 118 aa2.93□□□□□ -1.94
UBE3B-206ENST00000536398 KRTAP21-2Q3LI59 83 aa2.84□□□□□ -1.95
UBE3B-206ENST00000536398 PHGR1C9JFL3 82 aa2.61□□□□□ -1.99
UBE3B-206ENST00000536398 NDUFAF8A1L188 74 aa2.5□□□□□ -2.01
UBE3B-206ENST00000536398 MUC19Q7Z5P9 8384 aa2.43□□□□□ -2.02
UBE3B-206ENST00000536398 PRM1P04553 51 aa2.36□□□□□ -2.03
UBE3B-206ENST00000536398 INE1O15225 51 aa1.98□□□□□ -2.09
UBE3B-206ENST00000536398 KRTAP21-1Q3LI58 79 aa1.95□□□□□ -2.1
UBE3B-206ENST00000536398 MUC16Q8WXI7 14507 aa1.74□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 144.4 ms