RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 LCE1DQ5T752 114 aa5.07□□□□□ -1.6
RTN3P1-201ENST00000536295 PRR15LQ9BU68 103 aa5.05□□□□□ -1.6
RTN3P1-201ENST00000536295 KRTAP4-7Q9BYR0 210 aa5.01□□□□□ -1.61
RTN3P1-201ENST00000536295 ATP5EP56381 51 aaPredicted RBP5□□□□□ -1.61
RTN3P1-201ENST00000536295 KRTAP4-3Q9BYR4 195 aa5□□□□□ -1.61
RTN3P1-201ENST00000536295 MT4P47944 62 aa4.98□□□□□ -1.61
RTN3P1-201ENST00000536295 LCE4AQ5TA78 99 aa4.97□□□□□ -1.61
RTN3P1-201ENST00000536295 LINC01558Q9Y6Z2 57 aa4.97□□□□□ -1.61
RTN3P1-201ENST00000536295 KRTAP19-4Q3LI73 84 aa4.96□□□□□ -1.62
RTN3P1-201ENST00000536295 HMCN1Q96RW7 5635 aa4.96□□□□□ -1.62
RTN3P1-201ENST00000536295 H3BS24 57 aa4.94□□□□□ -1.62
RTN3P1-201ENST00000536295 KRTAP12-3P60328 96 aa4.88□□□□□ -1.63
RTN3P1-201ENST00000536295 UQCR11O14957 56 aa4.87□□□□□ -1.63
RTN3P1-201ENST00000536295 KRTAP5-4Q6L8H1 288 aa4.85□□□□□ -1.63
RTN3P1-201ENST00000536295 TMEM258P61165 79 aa4.84□□□□□ -1.63
RTN3P1-201ENST00000536295 AHNAK2Q8IVF2 5795 aa4.82□□□□□ -1.64
RTN3P1-201ENST00000536295 MIR22HGQ0VDD5 57 aa4.77□□□□□ -1.65
RTN3P1-201ENST00000536295 KRTAP4-2Q9BYR5 136 aa4.76□□□□□ -1.65
RTN3P1-201ENST00000536295 KRTAP25-1Q3LHN0 102 aa4.73□□□□□ -1.65
RTN3P1-201ENST00000536295 KRTAP4-11Q9BYQ6 195 aa4.71□□□□□ -1.66
RTN3P1-201ENST00000536295 K7ERS5 55 aa4.69□□□□□ -1.66
RTN3P1-201ENST00000536295 KRTAP5-10Q6L8G5 202 aa4.67□□□□□ -1.66
RTN3P1-201ENST00000536295 PSPHP1O15172 72 aa4.65□□□□□ -1.67
RTN3P1-201ENST00000536295 KRTAP5-5Q701N2 237 aaPredicted RBP4.64□□□□□ -1.67
RTN3P1-201ENST00000536295 KRTAP20-2Q3LI61 65 aa4.61□□□□□ -1.67
RTN3P1-201ENST00000536295 V9GYY9 64 aa4.6□□□□□ -1.67
RTN3P1-201ENST00000536295 SPRR5A0A1B0GTR4 108 aa4.56□□□□□ -1.68
RTN3P1-201ENST00000536295 KRTAP12-4P60329 112 aa4.56□□□□□ -1.68
RTN3P1-201ENST00000536295 Q1T7F1 81 aa4.56□□□□□ -1.68
RTN3P1-201ENST00000536295 KRTAP5-3Q6L8H2 238 aa4.56□□□□□ -1.68
RTN3P1-201ENST00000536295 KRTAP15-1Q3LI76 137 aa4.53□□□□□ -1.68
RTN3P1-201ENST00000536295 KRTAP23-1A1A580 65 aa4.51□□□□□ -1.69
RTN3P1-201ENST00000536295 KRTAP5-7Q6L8G8 165 aa4.49□□□□□ -1.69
RTN3P1-201ENST00000536295 A6NED7 52 aa4.48□□□□□ -1.69
RTN3P1-201ENST00000536295 LCE3CQ5T5A8 94 aa4.48□□□□□ -1.69
RTN3P1-201ENST00000536295 SYNE1Q8NF91 8797 aaKnown RBP4.47□□□□□ -1.69
RTN3P1-201ENST00000536295 CDC42SE1Q9NRR8 79 aa4.43□□□□□ -1.7
RTN3P1-201ENST00000536295 ROMO1P60602 79 aa4.35□□□□□ -1.71
RTN3P1-201ENST00000536295 RPS28P62857 69 aaKnown RBP4.32□□□□□ -1.72
RTN3P1-201ENST00000536295 MT1AP04731 61 aa4.31□□□□□ -1.72
RTN3P1-201ENST00000536295 KRTAP6-1Q3LI64 71 aa4.31□□□□□ -1.72
RTN3P1-201ENST00000536295 KRTAP5-2Q701N4 177 aa4.24□□□□□ -1.73
RTN3P1-201ENST00000536295 KRTAP9-6A8MVA2 160 aa4.23□□□□□ -1.73
RTN3P1-201ENST00000536295 KRTAP6-2Q3LI66 62 aa4.13□□□□□ -1.75
RTN3P1-201ENST00000536295 PCP4P48539 62 aa4.09□□□□□ -1.75
RTN3P1-201ENST00000536295 KRTAP5-8O75690 187 aa4.08□□□□□ -1.76
RTN3P1-201ENST00000536295 OBSCNQ5VST9 7968 aa4.01□□□□□ -1.77
RTN3P1-201ENST00000536295 AHNAKQ09666 5890 aaKnown RBP3.99□□□□□ -1.77
RTN3P1-201ENST00000536295 MUC5BQ9HC84 5762 aaPredicted RBP3.98□□□□□ -1.77
RTN3P1-201ENST00000536295 MT3P25713 68 aa3.95□□□□□ -1.78
RTN3P1-201ENST00000536295 MUC5ACP98088 5654 aa3.95□□□□□ -1.78
RTN3P1-201ENST00000536295 KRTAP5-1Q6L8H4 278 aa3.82□□□□□ -1.8
RTN3P1-201ENST00000536295 BRK1Q8WUW1 75 aa3.74□□□□□ -1.81
RTN3P1-201ENST00000536295 LCE1EQ5T753 118 aa3.61□□□□□ -1.83
RTN3P1-201ENST00000536295 SVIPQ8NHG7 77 aa3.59□□□□□ -1.83
RTN3P1-201ENST00000536295 PMAIP1Q13794 54 aa3.49□□□□□ -1.85
RTN3P1-201ENST00000536295 LCE1BQ5T7P3 118 aa3.48□□□□□ -1.85
RTN3P1-201ENST00000536295 PRAC1Q96KF2 57 aa3.43□□□□□ -1.86
RTN3P1-201ENST00000536295 LCE1CQ5T751 118 aa3.36□□□□□ -1.87
RTN3P1-201ENST00000536295 LCE3DQ9BYE3 92 aa3.21□□□□□ -1.9
RTN3P1-201ENST00000536295 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.16□□□□□ -1.9
RTN3P1-201ENST00000536295 KRTAP5-11Q6L8G4 156 aa3.15□□□□□ -1.91
RTN3P1-201ENST00000536295 PRO0628Q9UI54 55 aa3.09□□□□□ -1.91
RTN3P1-201ENST00000536295 LCE3EQ5T5B0 92 aa3.01□□□□□ -1.93
RTN3P1-201ENST00000536295 KTN1-AS1Q86SY8 53 aa3□□□□□ -1.93
RTN3P1-201ENST00000536295 LCE1FQ5T754 118 aa2.97□□□□□ -1.93
RTN3P1-201ENST00000536295 LUZP6Q538Z0 58 aa2.89□□□□□ -1.95
RTN3P1-201ENST00000536295 A0A0A0MQY5 61 aa2.85□□□□□ -1.95
RTN3P1-201ENST00000536295 KRTAP21-2Q3LI59 83 aa2.82□□□□□ -1.96
RTN3P1-201ENST00000536295 PHGR1C9JFL3 82 aa2.75□□□□□ -1.97
RTN3P1-201ENST00000536295 KRTAP4-4Q9BYR3 166 aa2.65□□□□□ -1.99
RTN3P1-201ENST00000536295 MUC19Q7Z5P9 8384 aa2.47□□□□□ -2.01
RTN3P1-201ENST00000536295 NDUFAF8A1L188 74 aa2.38□□□□□ -2.03
RTN3P1-201ENST00000536295 PRM1P04553 51 aa2.23□□□□□ -2.05
RTN3P1-201ENST00000536295 KRTAP21-1Q3LI58 79 aa2.07□□□□□ -2.08
RTN3P1-201ENST00000536295 MUC16Q8WXI7 14507 aa1.77□□□□□ -2.13
RTN3P1-201ENST00000536295 INE1O15225 51 aa1.68□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 109 ms