RNA–Protein interactions for RNA: ENST00000534557.1

VPS51-215, Transcript of VPS51, GARP complex subunit, humanhuman

APPRIS ALT2 TSL 3

Gene VPS51, Length 854 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-215ENST00000534557 ATP5EP56381 51 aaPredicted RBP6.37□□□□□ -1.39
VPS51-215ENST00000534557 KRTAP4-3Q9BYR4 195 aa6.3□□□□□ -1.4
VPS51-215ENST00000534557 LINC01558Q9Y6Z2 57 aa6.27□□□□□ -1.41
VPS51-215ENST00000534557 HMCN1Q96RW7 5635 aa6.27□□□□□ -1.41
VPS51-215ENST00000534557 CCDC179H3BU77 68 aa6.26□□□□□ -1.41
VPS51-215ENST00000534557 KRTAP5-4Q6L8H1 288 aa6.26□□□□□ -1.41
VPS51-215ENST00000534557 KRTAP12-3P60328 96 aa6.25□□□□□ -1.41
VPS51-215ENST00000534557 UQCR11O14957 56 aa6.23□□□□□ -1.41
VPS51-215ENST00000534557 TMEM258P61165 79 aa6.17□□□□□ -1.42
VPS51-215ENST00000534557 KRTAP4-6Q9BYQ5 205 aa6.17□□□□□ -1.42
VPS51-215ENST00000534557 KRTAP4-7Q9BYR0 210 aa6.11□□□□□ -1.43
VPS51-215ENST00000534557 K7ERS5 55 aa6.1□□□□□ -1.43
VPS51-215ENST00000534557 KRTAP25-1Q3LHN0 102 aa6.09□□□□□ -1.43
VPS51-215ENST00000534557 RPS28P62857 69 aaKnown RBP6.07□□□□□ -1.44
VPS51-215ENST00000534557 KRTAP5-10Q6L8G5 202 aa6.07□□□□□ -1.44
VPS51-215ENST00000534557 AHNAK2Q8IVF2 5795 aa6.06□□□□□ -1.44
VPS51-215ENST00000534557 MIR22HGQ0VDD5 57 aa6.05□□□□□ -1.44
VPS51-215ENST00000534557 KRTAP19-4Q3LI73 84 aa5.99□□□□□ -1.45
VPS51-215ENST00000534557 KRTAP12-4P60329 112 aa5.98□□□□□ -1.45
VPS51-215ENST00000534557 SPRR5A0A1B0GTR4 108 aa5.94□□□□□ -1.46
VPS51-215ENST00000534557 KRTAP20-2Q3LI61 65 aa5.94□□□□□ -1.46
VPS51-215ENST00000534557 KRTAP5-5Q701N2 237 aaPredicted RBP5.93□□□□□ -1.46
VPS51-215ENST00000534557 KRTAP5-3Q6L8H2 238 aa5.92□□□□□ -1.46
VPS51-215ENST00000534557 V9GYY9 64 aa5.9□□□□□ -1.46
VPS51-215ENST00000534557 KRTAP5-7Q6L8G8 165 aa5.88□□□□□ -1.47
VPS51-215ENST00000534557 KRTAP23-1A1A580 65 aa5.86□□□□□ -1.47
VPS51-215ENST00000534557 LOC100996750A0A140TA64 210 aa5.81□□□□□ -1.48
VPS51-215ENST00000534557 PSPHP1O15172 72 aa5.81□□□□□ -1.48
VPS51-215ENST00000534557 KRTAP15-1Q3LI76 137 aa5.8□□□□□ -1.48
VPS51-215ENST00000534557 Q1T7F1 81 aa5.74□□□□□ -1.49
VPS51-215ENST00000534557 LCE3CQ5T5A8 94 aa5.73□□□□□ -1.49
VPS51-215ENST00000534557 A6NED7 52 aa5.66□□□□□ -1.5
VPS51-215ENST00000534557 CDC42SE1Q9NRR8 79 aa5.66□□□□□ -1.5
VPS51-215ENST00000534557 SYNE1Q8NF91 8797 aaKnown RBP5.64□□□□□ -1.51
VPS51-215ENST00000534557 MT1AP04731 61 aa5.53□□□□□ -1.52
VPS51-215ENST00000534557 ROMO1P60602 79 aa5.53□□□□□ -1.52
VPS51-215ENST00000534557 KRTAP4-11Q9BYQ6 195 aa5.49□□□□□ -1.53
VPS51-215ENST00000534557 KRTAP6-1Q3LI64 71 aa5.47□□□□□ -1.53
VPS51-215ENST00000534557 PRO0628Q9UI54 55 aa5.45□□□□□ -1.54
VPS51-215ENST00000534557 KRTAP5-2Q701N4 177 aa5.44□□□□□ -1.54
VPS51-215ENST00000534557 BRK1Q8WUW1 75 aa5.41□□□□□ -1.54
VPS51-215ENST00000534557 KRTAP9-4Q9BYQ2 154 aa5.39□□□□□ -1.55
VPS51-215ENST00000534557 SVIPQ8NHG7 77 aa5.36□□□□□ -1.55
VPS51-215ENST00000534557 KRTAP9-6A8MVA2 160 aa5.29□□□□□ -1.56
VPS51-215ENST00000534557 KRTAP6-2Q3LI66 62 aa5.29□□□□□ -1.56
VPS51-215ENST00000534557 KRTAP5-8O75690 187 aa5.26□□□□□ -1.57
VPS51-215ENST00000534557 PMAIP1Q13794 54 aa5.16□□□□□ -1.58
VPS51-215ENST00000534557 MT3P25713 68 aa5.14□□□□□ -1.59
VPS51-215ENST00000534557 OBSCNQ5VST9 7968 aa5.13□□□□□ -1.59
VPS51-215ENST00000534557 KRTAP9-9Q9BYP9 154 aa5.13□□□□□ -1.59
VPS51-215ENST00000534557 MUC5ACP98088 5654 aa5.04□□□□□ -1.6
VPS51-215ENST00000534557 AHNAKQ09666 5890 aaKnown RBP5.03□□□□□ -1.6
VPS51-215ENST00000534557 MUC5BQ9HC84 5762 aaPredicted RBP5.02□□□□□ -1.61
VPS51-215ENST00000534557 KTN1-AS1Q86SY8 53 aa5.02□□□□□ -1.61
VPS51-215ENST00000534557 KRTAP5-1Q6L8H4 278 aa4.92□□□□□ -1.62
VPS51-215ENST00000534557 LCE1EQ5T753 118 aa4.73□□□□□ -1.65
VPS51-215ENST00000534557 PRAC1Q96KF2 57 aa4.63□□□□□ -1.67
VPS51-215ENST00000534557 LCE1BQ5T7P3 118 aa4.48□□□□□ -1.69
VPS51-215ENST00000534557 KRTAP4-2Q9BYR5 136 aa4.4□□□□□ -1.71
VPS51-215ENST00000534557 LCE1CQ5T751 118 aa4.38□□□□□ -1.71
VPS51-215ENST00000534557 H3BS24 57 aa4.22□□□□□ -1.73
VPS51-215ENST00000534557 LCE3DQ9BYE3 92 aa4.14□□□□□ -1.75
VPS51-215ENST00000534557 KRTAP4-12Q9BQ66 201 aa4.07□□□□□ -1.76
VPS51-215ENST00000534557 LUZP6Q538Z0 58 aa4.04□□□□□ -1.76
VPS51-215ENST00000534557 KRTAP5-11Q6L8G4 156 aa3.95□□□□□ -1.78
VPS51-215ENST00000534557 LCE1FQ5T754 118 aa3.94□□□□□ -1.78
VPS51-215ENST00000534557 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.93□□□□□ -1.78
VPS51-215ENST00000534557 LCE3EQ5T5B0 92 aa3.87□□□□□ -1.79
VPS51-215ENST00000534557 NDUFAF8A1L188 74 aa3.85□□□□□ -1.79
VPS51-215ENST00000534557 A0A0A0MQY5 61 aa3.64□□□□□ -1.83
VPS51-215ENST00000534557 PHGR1C9JFL3 82 aa3.6□□□□□ -1.83
VPS51-215ENST00000534557 KRTAP21-2Q3LI59 83 aa3.6□□□□□ -1.83
VPS51-215ENST00000534557 INE1O15225 51 aa3.38□□□□□ -1.87
VPS51-215ENST00000534557 KRTAP4-4Q9BYR3 166 aa3.33□□□□□ -1.88
VPS51-215ENST00000534557 MUC19Q7Z5P9 8384 aa3.17□□□□□ -1.9
VPS51-215ENST00000534557 PRM1P04553 51 aa2.78□□□□□ -1.96
VPS51-215ENST00000534557 KRTAP21-1Q3LI58 79 aa2.76□□□□□ -1.97
VPS51-215ENST00000534557 MUC16Q8WXI7 14507 aa2.24□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 62.9 ms