RNA–Protein interactions for RNA: ENST00000534336.1

MALAT1-202, metastasis associated lung adenocarcinoma transcript 1, humanhuman

BASIC

Gene MALAT1, Length 8,708 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-202ENST00000534336 KRTAP9-3Q9BYQ3 159 aa2.57□□□□□ -2
MALAT1-202ENST00000534336 LOC100996750A0A140TA64 210 aa2.56□□□□□ -2
MALAT1-202ENST00000534336 KRTAP6-2Q3LI66 62 aa2.53□□□□□ -2
MALAT1-202ENST00000534336 LCE4AQ5TA78 99 aa2.52□□□□□ -2.01
MALAT1-202ENST00000534336 HYDINQ4G0P3 5121 aa2.51□□□□□ -2.01
MALAT1-202ENST00000534336 KRTAP19-6Q3LI70 58 aa2.48□□□□□ -2.01
MALAT1-202ENST00000534336 MUC17Q685J3 4493 aa2.47□□□□□ -2.01
MALAT1-202ENST00000534336 KRTAP19-2Q3LHN2 52 aa2.45□□□□□ -2.02
MALAT1-202ENST00000534336 KMT2CQ8NEZ4 4911 aaKnown RBP2.44□□□□□ -2.02
MALAT1-202ENST00000534336 EPPK1P58107 5090 aaKnown RBP2.44□□□□□ -2.02
MALAT1-202ENST00000534336 KRTAP20-1Q3LI63 56 aa2.43□□□□□ -2.02
MALAT1-202ENST00000534336 KRTAP4-9Q9BYQ8 210 aa2.43□□□□□ -2.02
MALAT1-202ENST00000534336 HERC2O95714 4834 aa2.41□□□□□ -2.02
MALAT1-202ENST00000534336 SYNE2Q8WXH0 6885 aaKnown RBP2.4□□□□□ -2.03
MALAT1-202ENST00000534336 KRTAP4-3Q9BYR4 195 aa2.39□□□□□ -2.03
MALAT1-202ENST00000534336 KRTAP2-2Q9BYT5 123 aa2.38□□□□□ -2.03
MALAT1-202ENST00000534336 BIRC6Q9NR09 4857 aa2.37□□□□□ -2.03
MALAT1-202ENST00000534336 LPAP08519 4548 aa2.37□□□□□ -2.03
MALAT1-202ENST00000534336 KRTAP9-4Q9BYQ2 154 aa2.34□□□□□ -2.04
MALAT1-202ENST00000534336 LRP2P98164 4655 aa2.33□□□□□ -2.04
MALAT1-202ENST00000534336 RNF213Q63HN8 5207 aa2.33□□□□□ -2.04
MALAT1-202ENST00000534336 SYNE1Q8NF91 8797 aaKnown RBP2.32□□□□□ -2.04
MALAT1-202ENST00000534336 KRTAP9-9Q9BYP9 154 aa2.32□□□□□ -2.04
MALAT1-202ENST00000534336 KRTAP19-7Q3SYF9 63 aa2.32□□□□□ -2.04
MALAT1-202ENST00000534336 KRTAP17-1Q9BYP8 105 aa2.31□□□□□ -2.04
MALAT1-202ENST00000534336 KRTAP9-2Q9BYQ4 174 aa2.3□□□□□ -2.04
MALAT1-202ENST00000534336 ABCA13Q86UQ4 5058 aa2.28□□□□□ -2.04
MALAT1-202ENST00000534336 LCE2AQ5TA79 106 aaPredicted RBP2.27□□□□□ -2.05
MALAT1-202ENST00000534336 KRTAP9-7A8MTY7 169 aa2.26□□□□□ -2.05
MALAT1-202ENST00000534336 KRTAP6-1Q3LI64 71 aa2.25□□□□□ -2.05
MALAT1-202ENST00000534336 UBR4Q5T4S7 5183 aa2.21□□□□□ -2.06
MALAT1-202ENST00000534336 KRTAP9-6A0A140TA67 174 aa2.15□□□□□ -2.07
MALAT1-202ENST00000534336 KRTAP4-11Q9BYQ6 195 aa2.14□□□□□ -2.07
MALAT1-202ENST00000534336 KRTAP9-6A8MVA2 160 aa2.13□□□□□ -2.07
MALAT1-202ENST00000534336 KRTAP20-2Q3LI61 65 aa2.11□□□□□ -2.07
MALAT1-202ENST00000534336 HMCN2Q8NDA2 5059 aa2.1□□□□□ -2.07
MALAT1-202ENST00000534336 KRTAP6-3Q3LI67 103 aa2.08□□□□□ -2.08
MALAT1-202ENST00000534336 FAT4Q6V0I7 4981 aa2.07□□□□□ -2.08
MALAT1-202ENST00000534336 MUC2Q02817 5179 aa2.01□□□□□ -2.09
MALAT1-202ENST00000534336 MUC12Q9UKN1 5478 aa1.99□□□□□ -2.09
MALAT1-202ENST00000534336 USH2AO75445 5202 aa1.95□□□□□ -2.1
MALAT1-202ENST00000534336 FSIP2Q5CZC0 6907 aa1.91□□□□□ -2.1
MALAT1-202ENST00000534336 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.9□□□□□ -2.11
MALAT1-202ENST00000534336 OBSCNQ5VST9 7968 aa1.88□□□□□ -2.11
MALAT1-202ENST00000534336 MDN1Q9NU22 5596 aa1.85□□□□□ -2.11
MALAT1-202ENST00000534336 FCGBPQ9Y6R7 5405 aaPredicted RBP1.84□□□□□ -2.11
MALAT1-202ENST00000534336 KRTAP4-4Q9BYR3 166 aa1.84□□□□□ -2.11
MALAT1-202ENST00000534336 KRTAP4-6Q9BYQ5 205 aa1.75□□□□□ -2.13
MALAT1-202ENST00000534336 KRTAP5-9P26371 169 aa1.74□□□□□ -2.13
MALAT1-202ENST00000534336 KMT2DO14686 5537 aa1.73□□□□□ -2.13
MALAT1-202ENST00000534336 KRTAP4-12Q9BQ66 201 aa1.72□□□□□ -2.13
MALAT1-202ENST00000534336 KRTAP4-2Q9BYR5 136 aa1.72□□□□□ -2.13
MALAT1-202ENST00000534336 NEBP20929 6669 aa1.7□□□□□ -2.14
MALAT1-202ENST00000534336 MUC19Q7Z5P9 8384 aa1.68□□□□□ -2.14
MALAT1-202ENST00000534336 SSPOA2VEC9 5147 aa1.67□□□□□ -2.14
MALAT1-202ENST00000534336 DSTQ03001 7570 aaKnown RBP1.67□□□□□ -2.14
MALAT1-202ENST00000534336 KRTAP5-5Q701N2 237 aaPredicted RBP1.66□□□□□ -2.14
MALAT1-202ENST00000534336 KRTAP5-4Q6L8H1 288 aa1.63□□□□□ -2.15
MALAT1-202ENST00000534336 GPR98Q8WXG9 6306 aa1.63□□□□□ -2.15
MALAT1-202ENST00000534336 AHNAK2Q8IVF2 5795 aa1.61□□□□□ -2.15
MALAT1-202ENST00000534336 MACF1Q9UPN3 7388 aaKnown RBP1.6□□□□□ -2.15
MALAT1-202ENST00000534336 HMCN1Q96RW7 5635 aa1.51□□□□□ -2.17
MALAT1-202ENST00000534336 PHGR1C9JFL3 82 aa1.43□□□□□ -2.18
MALAT1-202ENST00000534336 KRTAP5-3Q6L8H2 238 aa1.37□□□□□ -2.19
MALAT1-202ENST00000534336 MUC5ACP98088 5654 aa1.36□□□□□ -2.19
MALAT1-202ENST00000534336 KRTAP5-10Q6L8G5 202 aa1.35□□□□□ -2.19
MALAT1-202ENST00000534336 AHNAKQ09666 5890 aaKnown RBP1.31□□□□□ -2.2
MALAT1-202ENST00000534336 KRTAP21-1Q3LI58 79 aa1.3□□□□□ -2.2
MALAT1-202ENST00000534336 MUC5BQ9HC84 5762 aaPredicted RBP1.3□□□□□ -2.2
MALAT1-202ENST00000534336 KRTAP5-2Q701N4 177 aa1.29□□□□□ -2.2
MALAT1-202ENST00000534336 KRTAP5-11Q6L8G4 156 aa1.2□□□□□ -2.22
MALAT1-202ENST00000534336 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.17□□□□□ -2.22
MALAT1-202ENST00000534336 KRTAP5-8O75690 187 aa1.15□□□□□ -2.22
MALAT1-202ENST00000534336 KRTAP5-1Q6L8H4 278 aa1.14□□□□□ -2.23
MALAT1-202ENST00000534336 KRTAP21-2Q3LI59 83 aa1.1□□□□□ -2.23
MALAT1-202ENST00000534336 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.24
MALAT1-202ENST00000534336 KRTAP5-7Q6L8G8 165 aa0.96□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 52.6 ms