RNA–Protein interactions for RNA: ENST00000533521.5

BEST1-207, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 1,128 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-207ENST00000533521 LCE3AQ5TA76 89 aa7.93□□□□□ -1.14
BEST1-207ENST00000533521 MT1LQ93083 61 aa7.93□□□□□ -1.14
BEST1-207ENST00000533521 MT1MQ8N339 61 aa7.9□□□□□ -1.14
BEST1-207ENST00000533521 PCP4P48539 62 aa7.87□□□□□ -1.15
BEST1-207ENST00000533521 K7ERS5 55 aa7.79□□□□□ -1.16
BEST1-207ENST00000533521 KRTAP4-9Q9BYQ8 210 aa7.76□□□□□ -1.17
BEST1-207ENST00000533521 RPS28P62857 69 aaKnown RBP7.75□□□□□ -1.17
BEST1-207ENST00000533521 LCE4AQ5TA78 99 aa7.73□□□□□ -1.17
BEST1-207ENST00000533521 A6NED7 52 aa7.7□□□□□ -1.18
BEST1-207ENST00000533521 KRTAP12-3P60328 96 aa7.68□□□□□ -1.18
BEST1-207ENST00000533521 LCE1DQ5T752 114 aa7.66□□□□□ -1.18
BEST1-207ENST00000533521 KRTAP25-1Q3LHN0 102 aa7.63□□□□□ -1.19
BEST1-207ENST00000533521 KRTAP4-3Q9BYR4 195 aa7.61□□□□□ -1.19
BEST1-207ENST00000533521 KRTAP5-4Q6L8H1 288 aa7.6□□□□□ -1.19
BEST1-207ENST00000533521 GPR98Q8WXG9 6306 aa7.59□□□□□ -1.2
BEST1-207ENST00000533521 HMCN1Q96RW7 5635 aa7.52□□□□□ -1.21
BEST1-207ENST00000533521 MT4P47944 62 aa7.51□□□□□ -1.21
BEST1-207ENST00000533521 KRTAP19-4Q3LI73 84 aa7.46□□□□□ -1.22
BEST1-207ENST00000533521 KRTAP4-7Q9BYR0 210 aa7.45□□□□□ -1.22
BEST1-207ENST00000533521 KRTAP23-1A1A580 65 aa7.43□□□□□ -1.22
BEST1-207ENST00000533521 CDC42SE1Q9NRR8 79 aa7.4□□□□□ -1.22
BEST1-207ENST00000533521 KRTAP4-6Q9BYQ5 205 aa7.33□□□□□ -1.24
BEST1-207ENST00000533521 ROMO1P60602 79 aa7.29□□□□□ -1.24
BEST1-207ENST00000533521 KRTAP5-5Q701N2 237 aaPredicted RBP7.28□□□□□ -1.24
BEST1-207ENST00000533521 AHNAK2Q8IVF2 5795 aa7.24□□□□□ -1.25
BEST1-207ENST00000533521 KRTAP15-1Q3LI76 137 aa7.2□□□□□ -1.26
BEST1-207ENST00000533521 SPRR5A0A1B0GTR4 108 aa7.16□□□□□ -1.26
BEST1-207ENST00000533521 KRTAP5-10Q6L8G5 202 aa7.15□□□□□ -1.26
BEST1-207ENST00000533521 KRTAP20-2Q3LI61 65 aa7.12□□□□□ -1.27
BEST1-207ENST00000533521 KRTAP12-4P60329 112 aa7.1□□□□□ -1.27
BEST1-207ENST00000533521 LCE3CQ5T5A8 94 aa7.08□□□□□ -1.28
BEST1-207ENST00000533521 LOC100996750A0A140TA64 210 aa7.05□□□□□ -1.28
BEST1-207ENST00000533521 KRTAP5-3Q6L8H2 238 aa6.98□□□□□ -1.29
BEST1-207ENST00000533521 SYNE1Q8NF91 8797 aaKnown RBP6.91□□□□□ -1.3
BEST1-207ENST00000533521 KRTAP5-7Q6L8G8 165 aa6.9□□□□□ -1.3
BEST1-207ENST00000533521 BRK1Q8WUW1 75 aa6.86□□□□□ -1.31
BEST1-207ENST00000533521 MT1AP04731 61 aa6.77□□□□□ -1.33
BEST1-207ENST00000533521 KRTAP6-1Q3LI64 71 aa6.68□□□□□ -1.34
BEST1-207ENST00000533521 KRTAP5-2Q701N4 177 aa6.66□□□□□ -1.34
BEST1-207ENST00000533521 KRTAP9-6A8MVA2 160 aa6.63□□□□□ -1.35
BEST1-207ENST00000533521 KRTAP9-4Q9BYQ2 154 aa6.55□□□□□ -1.36
BEST1-207ENST00000533521 KRTAP4-11Q9BYQ6 195 aa6.51□□□□□ -1.37
BEST1-207ENST00000533521 PMAIP1Q13794 54 aa6.45□□□□□ -1.38
BEST1-207ENST00000533521 KRTAP6-2Q3LI66 62 aa6.38□□□□□ -1.39
BEST1-207ENST00000533521 KRTAP5-8O75690 187 aa6.28□□□□□ -1.4
BEST1-207ENST00000533521 MT3P25713 68 aa6.21□□□□□ -1.42
BEST1-207ENST00000533521 PRAC1Q96KF2 57 aa6.16□□□□□ -1.42
BEST1-207ENST00000533521 OBSCNQ5VST9 7968 aa6.15□□□□□ -1.42
BEST1-207ENST00000533521 PRO0628Q9UI54 55 aa6.14□□□□□ -1.43
BEST1-207ENST00000533521 MUC5BQ9HC84 5762 aaPredicted RBP5.97□□□□□ -1.45
BEST1-207ENST00000533521 MUC5ACP98088 5654 aa5.96□□□□□ -1.46
BEST1-207ENST00000533521 KRTAP9-9Q9BYP9 154 aa5.96□□□□□ -1.46
BEST1-207ENST00000533521 AHNAKQ09666 5890 aaKnown RBP5.96□□□□□ -1.46
BEST1-207ENST00000533521 KRTAP5-1Q6L8H4 278 aa5.94□□□□□ -1.46
BEST1-207ENST00000533521 KTN1-AS1Q86SY8 53 aa5.84□□□□□ -1.47
BEST1-207ENST00000533521 LCE1EQ5T753 118 aa5.77□□□□□ -1.49
BEST1-207ENST00000533521 SVIPQ8NHG7 77 aa5.59□□□□□ -1.51
BEST1-207ENST00000533521 KRTAP4-2Q9BYR5 136 aa5.37□□□□□ -1.55
BEST1-207ENST00000533521 LCE1CQ5T751 118 aa5.33□□□□□ -1.56
BEST1-207ENST00000533521 LCE1BQ5T7P3 118 aa5.33□□□□□ -1.56
BEST1-207ENST00000533521 LUZP6Q538Z0 58 aa5.19□□□□□ -1.58
BEST1-207ENST00000533521 LCE3DQ9BYE3 92 aa5.11□□□□□ -1.59
BEST1-207ENST00000533521 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.88□□□□□ -1.63
BEST1-207ENST00000533521 KRTAP5-11Q6L8G4 156 aa4.82□□□□□ -1.64
BEST1-207ENST00000533521 LCE3EQ5T5B0 92 aa4.81□□□□□ -1.64
BEST1-207ENST00000533521 KRTAP4-12Q9BQ66 201 aa4.76□□□□□ -1.65
BEST1-207ENST00000533521 LCE1FQ5T754 118 aa4.74□□□□□ -1.65
BEST1-207ENST00000533521 KRTAP21-2Q3LI59 83 aa4.44□□□□□ -1.7
BEST1-207ENST00000533521 NDUFAF8A1L188 74 aa4.33□□□□□ -1.72
BEST1-207ENST00000533521 PHGR1C9JFL3 82 aa4.15□□□□□ -1.75
BEST1-207ENST00000533521 KRTAP4-4Q9BYR3 166 aa3.94□□□□□ -1.78
BEST1-207ENST00000533521 MUC19Q7Z5P9 8384 aa3.78□□□□□ -1.8
BEST1-207ENST00000533521 PRM1P04553 51 aa3.74□□□□□ -1.81
BEST1-207ENST00000533521 A0A0A0MQY5 61 aa3.52□□□□□ -1.85
BEST1-207ENST00000533521 INE1O15225 51 aa3.52□□□□□ -1.85
BEST1-207ENST00000533521 KRTAP21-1Q3LI58 79 aa3.19□□□□□ -1.9
BEST1-207ENST00000533521 H3BS24 57 aa3.05□□□□□ -1.92
BEST1-207ENST00000533521 MUC16Q8WXI7 14507 aa2.7□□□□□ -1.98
Retrieved 78 of 20,778 RNA–protein pairs in 102.6 ms