RNA–Protein interactions for RNA: ENST00000533189.1

CTNND1-235, Transcript of catenin delta 1, humanhuman

TSL 3

Gene CTNND1, Length 498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-235ENST00000533189 SERP1Q9Y6X1 66 aa3.49□□□□□ -1.85
CTNND1-235ENST00000533189 TNP1P09430 55 aa3.48□□□□□ -1.85
CTNND1-235ENST00000533189 COX7CP15954 63 aa3.46□□□□□ -1.86
CTNND1-235ENST00000533189 SYNE1Q8NF91 8797 aaKnown RBP3.46□□□□□ -1.86
CTNND1-235ENST00000533189 A0A1B0GU33 70 aa3.45□□□□□ -1.86
CTNND1-235ENST00000533189 SMIM20Q8N5G0 67 aa3.45□□□□□ -1.86
CTNND1-235ENST00000533189 SPANXA2-OT1Q8N9U9 137 aa3.44□□□□□ -1.86
CTNND1-235ENST00000533189 KRTAP4-11Q9BYQ6 195 aa3.44□□□□□ -1.86
CTNND1-235ENST00000533189 SERP2Q8N6R1 65 aa3.43□□□□□ -1.86
CTNND1-235ENST00000533189 SNURFQ9Y675 71 aa3.43□□□□□ -1.86
CTNND1-235ENST00000533189 KRTAP12-3P60328 96 aa3.42□□□□□ -1.86
CTNND1-235ENST00000533189 SVIPQ8NHG7 77 aa3.41□□□□□ -1.86
CTNND1-235ENST00000533189 AHNAKQ09666 5890 aaKnown RBP3.41□□□□□ -1.86
CTNND1-235ENST00000533189 TMEM258P61165 79 aa3.39□□□□□ -1.87
CTNND1-235ENST00000533189 MUC5ACP98088 5654 aa3.39□□□□□ -1.87
CTNND1-235ENST00000533189 MUC5BQ9HC84 5762 aaPredicted RBP3.38□□□□□ -1.87
CTNND1-235ENST00000533189 LOC100996750A0A140TA64 210 aa3.38□□□□□ -1.87
CTNND1-235ENST00000533189 RPS28P62857 69 aaKnown RBP3.38□□□□□ -1.87
CTNND1-235ENST00000533189 COA5Q86WW8 74 aa3.38□□□□□ -1.87
CTNND1-235ENST00000533189 SMIM26A0A096LP01 95 aa3.37□□□□□ -1.87
CTNND1-235ENST00000533189 KRTAP5-8O75690 187 aa3.33□□□□□ -1.88
CTNND1-235ENST00000533189 H7BZZ5 65 aa3.32□□□□□ -1.88
CTNND1-235ENST00000533189 A8MU10 97 aa3.31□□□□□ -1.88
CTNND1-235ENST00000533189 KRTAP5-2Q701N4 177 aa3.3□□□□□ -1.88
CTNND1-235ENST00000533189 ATP5EP56381 51 aaPredicted RBP3.27□□□□□ -1.89
CTNND1-235ENST00000533189 KRTAP9-9Q9BYP9 154 aa3.25□□□□□ -1.89
CTNND1-235ENST00000533189 A0A1B0GU69 56 aa3.23□□□□□ -1.89
CTNND1-235ENST00000533189 KRTAP19-4Q3LI73 84 aa3.2□□□□□ -1.9
CTNND1-235ENST00000533189 MT1AP04731 61 aa3.19□□□□□ -1.9
CTNND1-235ENST00000533189 KRTAP6-1Q3LI64 71 aa3.19□□□□□ -1.9
CTNND1-235ENST00000533189 OBSCNQ5VST9 7968 aa3.18□□□□□ -1.9
CTNND1-235ENST00000533189 Q1T7F1 81 aa3.12□□□□□ -1.91
CTNND1-235ENST00000533189 KRTAP25-1Q3LHN0 102 aa3.12□□□□□ -1.91
CTNND1-235ENST00000533189 KRTAP6-2Q3LI66 62 aa3.12□□□□□ -1.91
CTNND1-235ENST00000533189 LCE3CQ5T5A8 94 aa3.11□□□□□ -1.91
CTNND1-235ENST00000533189 KRTAP9-4Q9BYQ2 154 aa3.11□□□□□ -1.91
CTNND1-235ENST00000533189 PRO0628Q9UI54 55 aa3.11□□□□□ -1.91
CTNND1-235ENST00000533189 KRTAP15-1Q3LI76 137 aa3.07□□□□□ -1.92
CTNND1-235ENST00000533189 V9GYY9 64 aa3.07□□□□□ -1.92
CTNND1-235ENST00000533189 BRK1Q8WUW1 75 aa3.04□□□□□ -1.92
CTNND1-235ENST00000533189 PRR15LQ9BU68 103 aa3.04□□□□□ -1.92
CTNND1-235ENST00000533189 KRTAP5-1Q6L8H4 278 aa3.02□□□□□ -1.93
CTNND1-235ENST00000533189 PSPHP1O15172 72 aa3.01□□□□□ -1.93
CTNND1-235ENST00000533189 LINC01558Q9Y6Z2 57 aa3□□□□□ -1.93
CTNND1-235ENST00000533189 MT3P25713 68 aa2.95□□□□□ -1.94
CTNND1-235ENST00000533189 KRTAP23-1A1A580 65 aa2.93□□□□□ -1.94
CTNND1-235ENST00000533189 CDC42SE1Q9NRR8 79 aa2.93□□□□□ -1.94
CTNND1-235ENST00000533189 KRTAP9-6A8MVA2 160 aa2.92□□□□□ -1.94
CTNND1-235ENST00000533189 PMAIP1Q13794 54 aa2.92□□□□□ -1.94
CTNND1-235ENST00000533189 A6NED7 52 aa2.91□□□□□ -1.94
CTNND1-235ENST00000533189 UQCR11O14957 56 aa2.91□□□□□ -1.94
CTNND1-235ENST00000533189 H3BS24 57 aa2.9□□□□□ -1.95
CTNND1-235ENST00000533189 K7ERS5 55 aa2.86□□□□□ -1.95
CTNND1-235ENST00000533189 KTN1-AS1Q86SY8 53 aa2.86□□□□□ -1.95
CTNND1-235ENST00000533189 MIR22HGQ0VDD5 57 aa2.8□□□□□ -1.96
CTNND1-235ENST00000533189 LCE1EQ5T753 118 aa2.78□□□□□ -1.96
CTNND1-235ENST00000533189 PRAC1Q96KF2 57 aa2.7□□□□□ -1.98
CTNND1-235ENST00000533189 LCE1BQ5T7P3 118 aa2.67□□□□□ -1.98
CTNND1-235ENST00000533189 KRTAP4-2Q9BYR5 136 aa2.65□□□□□ -1.99
CTNND1-235ENST00000533189 LCE1CQ5T751 118 aa2.58□□□□□ -2
CTNND1-235ENST00000533189 ROMO1P60602 79 aa2.56□□□□□ -2
CTNND1-235ENST00000533189 KRTAP4-12Q9BQ66 201 aa2.56□□□□□ -2
CTNND1-235ENST00000533189 A0A0A0MQY5 61 aa2.49□□□□□ -2.01
CTNND1-235ENST00000533189 KRTAP5-11Q6L8G4 156 aa2.41□□□□□ -2.02
CTNND1-235ENST00000533189 LCE1FQ5T754 118 aa2.39□□□□□ -2.03
CTNND1-235ENST00000533189 PHGR1C9JFL3 82 aa2.36□□□□□ -2.03
CTNND1-235ENST00000533189 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.29□□□□□ -2.04
CTNND1-235ENST00000533189 NDUFAF8A1L188 74 aa2.25□□□□□ -2.05
CTNND1-235ENST00000533189 LCE3DQ9BYE3 92 aa2.17□□□□□ -2.06
CTNND1-235ENST00000533189 LUZP6Q538Z0 58 aa2.12□□□□□ -2.07
CTNND1-235ENST00000533189 KRTAP21-2Q3LI59 83 aa2.09□□□□□ -2.07
CTNND1-235ENST00000533189 KRTAP4-4Q9BYR3 166 aa2□□□□□ -2.09
CTNND1-235ENST00000533189 LCE3EQ5T5B0 92 aa1.99□□□□□ -2.09
CTNND1-235ENST00000533189 MUC19Q7Z5P9 8384 aa1.98□□□□□ -2.09
CTNND1-235ENST00000533189 INE1O15225 51 aa1.87□□□□□ -2.11
CTNND1-235ENST00000533189 KRTAP21-1Q3LI58 79 aa1.8□□□□□ -2.12
CTNND1-235ENST00000533189 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
CTNND1-235ENST00000533189 PRM1P04553 51 aa1.35□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 321.2 ms