RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 PRCDQ00LT1 54 aa-0.51□□□□□ -2.49
AC055878.1-201ENST00000531858 RNF213Q63HN8 5207 aa-0.51□□□□□ -2.49
AC055878.1-201ENST00000531858 EYSQ5T1H1 3165 aa-0.52□□□□□ -2.49
AC055878.1-201ENST00000531858 TLN1Q9Y490 2541 aaKnown RBP-0.52□□□□□ -2.49
AC055878.1-201ENST00000531858 RYR3Q15413 4870 aa-0.52□□□□□ -2.49
AC055878.1-201ENST00000531858 DMXL2Q8TDJ6 3036 aa-0.52□□□□□ -2.49
AC055878.1-201ENST00000531858 KIAA1109Q2LD37 5005 aa-0.53□□□□□ -2.49
AC055878.1-201ENST00000531858 RYR2Q92736 4967 aa-0.53□□□□□ -2.49
AC055878.1-201ENST00000531858 MT1MQ8N339 61 aa-0.54□□□□□ -2.5
AC055878.1-201ENST00000531858 VPS13CQ709C8 3753 aa-0.54□□□□□ -2.5
AC055878.1-201ENST00000531858 MT2AP02795 61 aa-0.55□□□□□ -2.5
AC055878.1-201ENST00000531858 CSMD2Q7Z408 3487 aa-0.55□□□□□ -2.5
AC055878.1-201ENST00000531858 CEP250Q9BV73 2442 aa-0.55□□□□□ -2.5
AC055878.1-201ENST00000531858 DEFB104AQ8WTQ1 72 aa-0.56□□□□□ -2.5
AC055878.1-201ENST00000531858 SMG1Q96Q15 3661 aaKnown RBP-0.57□□□□□ -2.5
AC055878.1-201ENST00000531858 DEFB4AO15263 64 aa-0.57□□□□□ -2.5
AC055878.1-201ENST00000531858 MT1GP13640 62 aa-0.58□□□□□ -2.5
AC055878.1-201ENST00000531858 CFAP54Q96N23 3096 aa-0.58□□□□□ -2.5
AC055878.1-201ENST00000531858 H3BUX3 64 aa-0.59□□□□□ -2.5
AC055878.1-201ENST00000531858 PRUNE2Q8WUY3 3088 aa-0.6□□□□□ -2.51
AC055878.1-201ENST00000531858 DEFB124Q8NES8 71 aa-0.61□□□□□ -2.51
AC055878.1-201ENST00000531858 FRYLO94915 3013 aa-0.61□□□□□ -2.51
AC055878.1-201ENST00000531858 ATMQ13315 3056 aa-0.62□□□□□ -2.51
AC055878.1-201ENST00000531858 MT1BP07438 61 aa-0.64□□□□□ -2.51
AC055878.1-201ENST00000531858 MYO15AQ9UKN7 3530 aa-0.65□□□□□ -2.51
AC055878.1-201ENST00000531858 A0A096LNI7 61 aa-0.66□□□□□ -2.52
AC055878.1-201ENST00000531858 DEFB133Q30KQ1 61 aa-0.66□□□□□ -2.52
AC055878.1-201ENST00000531858 FREM2Q5SZK8 3169 aa-0.66□□□□□ -2.52
AC055878.1-201ENST00000531858 RPS29P62273 56 aaKnown RBP-0.67□□□□□ -2.52
AC055878.1-201ENST00000531858 DMDP11532 3685 aa-0.67□□□□□ -2.52
AC055878.1-201ENST00000531858 PCNTO95613 3336 aa-0.71□□□□□ -2.52
AC055878.1-201ENST00000531858 ABCA13Q86UQ4 5058 aa-0.71□□□□□ -2.52
AC055878.1-201ENST00000531858 WDFY3Q8IZQ1 3526 aa-0.72□□□□□ -2.52
AC055878.1-201ENST00000531858 HTN1P15515 57 aa-0.72□□□□□ -2.52
AC055878.1-201ENST00000531858 TMEM167AQ8TBQ9 72 aa-0.72□□□□□ -2.52
AC055878.1-201ENST00000531858 CENPEQ02224 2701 aa-0.72□□□□□ -2.52
AC055878.1-201ENST00000531858 TTTY10Q9BZA0 68 aa-0.73□□□□□ -2.53
AC055878.1-201ENST00000531858 DNAH12Q6ZR08 3092 aa-0.73□□□□□ -2.53
AC055878.1-201ENST00000531858 WDFY4Q6ZS81 3184 aa-0.73□□□□□ -2.53
AC055878.1-201ENST00000531858 MT1FP04733 61 aa-0.74□□□□□ -2.53
AC055878.1-201ENST00000531858 BOD1L1Q8NFC6 3051 aa-0.74□□□□□ -2.53
AC055878.1-201ENST00000531858 SZT2Q5T011 3432 aa-0.75□□□□□ -2.53
AC055878.1-201ENST00000531858 CEP350Q5VT06 3117 aa-0.77□□□□□ -2.53
AC055878.1-201ENST00000531858 MUC3AQ02505 3323 aa-0.77□□□□□ -2.53
AC055878.1-201ENST00000531858 CD52P31358 61 aa-0.79□□□□□ -2.54
AC055878.1-201ENST00000531858 KRTAP20-1Q3LI63 56 aa-0.8□□□□□ -2.54
AC055878.1-201ENST00000531858 MKI67P46013 3256 aaKnown RBP-0.82□□□□□ -2.54
AC055878.1-201ENST00000531858 SPEGQ15772 3267 aa-0.83□□□□□ -2.54
AC055878.1-201ENST00000531858 H3BSH0 61 aa-0.84□□□□□ -2.54
AC055878.1-201ENST00000531858 EP400Q96L91 3159 aa-0.85□□□□□ -2.55
AC055878.1-201ENST00000531858 DCHS1Q96JQ0 3298 aa-0.86□□□□□ -2.55
AC055878.1-201ENST00000531858 XIRP2A4UGR9 3374 aa-0.86□□□□□ -2.55
AC055878.1-201ENST00000531858 LOC400499M0QZD8 3231 aa-0.88□□□□□ -2.55
AC055878.1-201ENST00000531858 KRTAP19-2Q3LHN2 52 aa-0.91□□□□□ -2.56
AC055878.1-201ENST00000531858 RPL39P5Q59GN2 51 aa-0.93□□□□□ -2.56
AC055878.1-201ENST00000531858 USP34Q70CQ2 3546 aa-0.93□□□□□ -2.56
AC055878.1-201ENST00000531858 CFAP47Q6ZTR5 3102 aa-0.95□□□□□ -2.56
AC055878.1-201ENST00000531858 UNC80Q8N2C7 3258 aa-0.95□□□□□ -2.56
AC055878.1-201ENST00000531858 ASPMQ8IZT6 3477 aa-0.99□□□□□ -2.57
AC055878.1-201ENST00000531858 DNAH14Q0VDD8 3507 aa-1.01□□□□□ -2.57
AC055878.1-201ENST00000531858 KRTAP19-6Q3LI70 58 aa-1.02□□□□□ -2.57
AC055878.1-201ENST00000531858 VCANP13611 3396 aa-1.03□□□□□ -2.57
AC055878.1-201ENST00000531858 DEFB108AA8MXU0 73 aa-1.04□□□□□ -2.58
AC055878.1-201ENST00000531858 LINC01556Q5JQF7 62 aa-1.04□□□□□ -2.58
AC055878.1-201ENST00000531858 BRCA2P51587 3418 aa-1.04□□□□□ -2.58
AC055878.1-201ENST00000531858 CENPFP49454 3210 aa-1.1□□□□□ -2.59
AC055878.1-201ENST00000531858 A0A096LPF7 62 aa-1.11□□□□□ -2.59
AC055878.1-201ENST00000531858 CDH23Q9H251 3354 aa-1.13□□□□□ -2.59
AC055878.1-201ENST00000531858 VPS13AQ96RL7 3174 aa-1.14□□□□□ -2.59
AC055878.1-201ENST00000531858 APELAP0DMC3 54 aa-1.17□□□□□ -2.6
AC055878.1-201ENST00000531858 Q9Y3F1 56 aa-1.17□□□□□ -2.6
AC055878.1-201ENST00000531858 UTRNP46939 3433 aa-1.22□□□□□ -2.6
AC055878.1-201ENST00000531858 HTN3P15516 51 aa-1.32□□□□□ -2.62
AC055878.1-201ENST00000531858 GOLGB1Q14789 3259 aaKnown RBP-1.34□□□□□ -2.62
AC055878.1-201ENST00000531858 COX14Q96I36 57 aa-1.34□□□□□ -2.62
AC055878.1-201ENST00000531858 DEFB108BQ8NET1 73 aa-1.42□□□□□ -2.64
AC055878.1-201ENST00000531858 STATHP02808 62 aa-1.61□□□□□ -2.67
Retrieved 77 of 20,778 RNA–protein pairs in 13 ms