RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 SEC61GP60059 68 aa6.5□□□□□ -1.37
SSSCA1-206ENST00000531405 KRTAP4-3Q9BYR4 195 aa6.5□□□□□ -1.37
SSSCA1-206ENST00000531405 PRR15LQ9BU68 103 aa6.49□□□□□ -1.37
SSSCA1-206ENST00000531405 KRTAP12-1P59990 96 aa6.46□□□□□ -1.38
SSSCA1-206ENST00000531405 KRTAP5-10Q6L8G5 202 aa6.46□□□□□ -1.38
SSSCA1-206ENST00000531405 KRTAP5-4Q6L8H1 288 aa6.46□□□□□ -1.38
SSSCA1-206ENST00000531405 KRTAP4-6Q9BYQ5 205 aa6.45□□□□□ -1.38
SSSCA1-206ENST00000531405 A0A1B0GU33 70 aa6.4□□□□□ -1.38
SSSCA1-206ENST00000531405 PSPHP1O15172 72 aa6.39□□□□□ -1.39
SSSCA1-206ENST00000531405 C10orf95Q9H7T3 257 aa6.38□□□□□ -1.39
SSSCA1-206ENST00000531405 LCE3AQ5TA76 89 aa6.36□□□□□ -1.39
SSSCA1-206ENST00000531405 UQCR11O14957 56 aa6.3□□□□□ -1.4
SSSCA1-206ENST00000531405 KRTAP4-7Q9BYR0 210 aa6.24□□□□□ -1.41
SSSCA1-206ENST00000531405 A8MU10 97 aa6.23□□□□□ -1.41
SSSCA1-206ENST00000531405 KRTAP5-7Q6L8G8 165 aa6.23□□□□□ -1.41
SSSCA1-206ENST00000531405 KRTAP5-3Q6L8H2 238 aa6.23□□□□□ -1.41
SSSCA1-206ENST00000531405 A6NED7 52 aa6.22□□□□□ -1.41
SSSCA1-206ENST00000531405 TNP1P09430 55 aa6.22□□□□□ -1.41
SSSCA1-206ENST00000531405 MIR22HGQ0VDD5 57 aa6.2□□□□□ -1.42
SSSCA1-206ENST00000531405 KRTAP20-2Q3LI61 65 aa6.14□□□□□ -1.43
SSSCA1-206ENST00000531405 CDC42SE1Q9NRR8 79 aa6.14□□□□□ -1.43
SSSCA1-206ENST00000531405 KRTAP12-3P60328 96 aa6.09□□□□□ -1.43
SSSCA1-206ENST00000531405 KRTAP5-5Q701N2 237 aaPredicted RBP6.07□□□□□ -1.44
SSSCA1-206ENST00000531405 SPRR5A0A1B0GTR4 108 aa6.03□□□□□ -1.44
SSSCA1-206ENST00000531405 BRK1Q8WUW1 75 aa6.02□□□□□ -1.45
SSSCA1-206ENST00000531405 KRTAP12-4P60329 112 aa5.96□□□□□ -1.46
SSSCA1-206ENST00000531405 SYNE1Q8NF91 8797 aaKnown RBP5.95□□□□□ -1.46
SSSCA1-206ENST00000531405 LOC100996750A0A140TA64 210 aa5.94□□□□□ -1.46
SSSCA1-206ENST00000531405 K7ERS5 55 aa5.94□□□□□ -1.46
SSSCA1-206ENST00000531405 PRO0628Q9UI54 55 aa5.88□□□□□ -1.47
SSSCA1-206ENST00000531405 PMAIP1Q13794 54 aa5.71□□□□□ -1.5
SSSCA1-206ENST00000531405 ROMO1P60602 79 aa5.69□□□□□ -1.5
SSSCA1-206ENST00000531405 KRTAP25-1Q3LHN0 102 aa5.68□□□□□ -1.5
SSSCA1-206ENST00000531405 KRTAP4-11Q9BYQ6 195 aa5.68□□□□□ -1.5
SSSCA1-206ENST00000531405 KRTAP19-4Q3LI73 84 aa5.61□□□□□ -1.51
SSSCA1-206ENST00000531405 KRTAP5-2Q701N4 177 aa5.6□□□□□ -1.51
SSSCA1-206ENST00000531405 LCE3CQ5T5A8 94 aa5.57□□□□□ -1.52
SSSCA1-206ENST00000531405 KRTAP6-1Q3LI64 71 aa5.56□□□□□ -1.52
SSSCA1-206ENST00000531405 KRTAP15-1Q3LI76 137 aa5.56□□□□□ -1.52
SSSCA1-206ENST00000531405 MT1AP04731 61 aa5.53□□□□□ -1.52
SSSCA1-206ENST00000531405 AHNAKQ09666 5890 aaKnown RBP5.51□□□□□ -1.53
SSSCA1-206ENST00000531405 KRTAP5-8O75690 187 aa5.51□□□□□ -1.53
SSSCA1-206ENST00000531405 MUC5ACP98088 5654 aa5.49□□□□□ -1.53
SSSCA1-206ENST00000531405 KRTAP23-1A1A580 65 aa5.47□□□□□ -1.53
SSSCA1-206ENST00000531405 MUC5BQ9HC84 5762 aaPredicted RBP5.47□□□□□ -1.53
SSSCA1-206ENST00000531405 KTN1-AS1Q86SY8 53 aa5.46□□□□□ -1.54
SSSCA1-206ENST00000531405 OBSCNQ5VST9 7968 aa5.45□□□□□ -1.54
SSSCA1-206ENST00000531405 KRTAP6-2Q3LI66 62 aa5.38□□□□□ -1.55
SSSCA1-206ENST00000531405 KRTAP9-4Q9BYQ2 154 aa5.38□□□□□ -1.55
SSSCA1-206ENST00000531405 KRTAP9-6A8MVA2 160 aa5.32□□□□□ -1.56
SSSCA1-206ENST00000531405 PRAC1Q96KF2 57 aa5.32□□□□□ -1.56
SSSCA1-206ENST00000531405 KRTAP9-9Q9BYP9 154 aa5.26□□□□□ -1.57
SSSCA1-206ENST00000531405 KRTAP5-1Q6L8H4 278 aa5.1□□□□□ -1.59
SSSCA1-206ENST00000531405 MT3P25713 68 aa5.06□□□□□ -1.6
SSSCA1-206ENST00000531405 SVIPQ8NHG7 77 aa5.04□□□□□ -1.6
SSSCA1-206ENST00000531405 LCE1EQ5T753 118 aa4.71□□□□□ -1.66
SSSCA1-206ENST00000531405 LCE1BQ5T7P3 118 aa4.53□□□□□ -1.68
SSSCA1-206ENST00000531405 KRTAP4-2Q9BYR5 136 aa4.53□□□□□ -1.68
SSSCA1-206ENST00000531405 LUZP6Q538Z0 58 aa4.39□□□□□ -1.71
SSSCA1-206ENST00000531405 LCE1CQ5T751 118 aa4.38□□□□□ -1.71
SSSCA1-206ENST00000531405 KRTAP4-12Q9BQ66 201 aa4.27□□□□□ -1.73
SSSCA1-206ENST00000531405 NDUFAF8A1L188 74 aa4.15□□□□□ -1.75
SSSCA1-206ENST00000531405 H3BS24 57 aa4.15□□□□□ -1.75
SSSCA1-206ENST00000531405 KRTAP5-11Q6L8G4 156 aa4.01□□□□□ -1.77
SSSCA1-206ENST00000531405 LCE1FQ5T754 118 aa3.95□□□□□ -1.78
SSSCA1-206ENST00000531405 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.94□□□□□ -1.78
SSSCA1-206ENST00000531405 LCE3DQ9BYE3 92 aa3.93□□□□□ -1.78
SSSCA1-206ENST00000531405 PHGR1C9JFL3 82 aa3.78□□□□□ -1.8
SSSCA1-206ENST00000531405 KRTAP21-2Q3LI59 83 aa3.65□□□□□ -1.83
SSSCA1-206ENST00000531405 A0A0A0MQY5 61 aa3.63□□□□□ -1.83
SSSCA1-206ENST00000531405 LCE3EQ5T5B0 92 aa3.63□□□□□ -1.83
SSSCA1-206ENST00000531405 INE1O15225 51 aa3.51□□□□□ -1.85
SSSCA1-206ENST00000531405 KRTAP4-4Q9BYR3 166 aa3.45□□□□□ -1.86
SSSCA1-206ENST00000531405 MUC19Q7Z5P9 8384 aa3.37□□□□□ -1.87
SSSCA1-206ENST00000531405 PRM1P04553 51 aa2.92□□□□□ -1.94
SSSCA1-206ENST00000531405 KRTAP21-1Q3LI58 79 aa2.84□□□□□ -1.95
SSSCA1-206ENST00000531405 MUC16Q8WXI7 14507 aa2.37□□□□□ -2.03
Retrieved 77 of 20,778 RNA–protein pairs in 52.2 ms