RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 KRTAP4-7Q9BYR0 210 aa7.05□□□□□ -1.28
TSPAN4-219ENST00000530404 A0A1B0GU69 56 aa7.01□□□□□ -1.29
TSPAN4-219ENST00000530404 H7BZZ5 65 aa6.98□□□□□ -1.29
TSPAN4-219ENST00000530404 COX7CP15954 63 aa6.98□□□□□ -1.29
TSPAN4-219ENST00000530404 KRTAP5-3Q6L8H2 238 aa6.95□□□□□ -1.3
TSPAN4-219ENST00000530404 KRTAP5-7Q6L8G8 165 aa6.93□□□□□ -1.3
TSPAN4-219ENST00000530404 KRTAP12-3P60328 96 aa6.88□□□□□ -1.31
TSPAN4-219ENST00000530404 KRTAP20-2Q3LI61 65 aa6.88□□□□□ -1.31
TSPAN4-219ENST00000530404 ANAPC13Q9BS18 74 aa6.84□□□□□ -1.31
TSPAN4-219ENST00000530404 KRTAP5-5Q701N2 237 aaPredicted RBP6.81□□□□□ -1.32
TSPAN4-219ENST00000530404 SPRR5A0A1B0GTR4 108 aa6.74□□□□□ -1.33
TSPAN4-219ENST00000530404 CCDC179H3BU77 68 aa6.74□□□□□ -1.33
TSPAN4-219ENST00000530404 SYNE1Q8NF91 8797 aaKnown RBP6.71□□□□□ -1.34
TSPAN4-219ENST00000530404 LOC100996750A0A140TA64 210 aa6.7□□□□□ -1.34
TSPAN4-219ENST00000530404 KRTAP12-4P60329 112 aa6.68□□□□□ -1.34
TSPAN4-219ENST00000530404 PRR15LQ9BU68 103 aa6.65□□□□□ -1.34
TSPAN4-219ENST00000530404 LINC01558Q9Y6Z2 57 aa6.54□□□□□ -1.36
TSPAN4-219ENST00000530404 ATP5EP56381 51 aaPredicted RBP6.53□□□□□ -1.36
TSPAN4-219ENST00000530404 TMEM258P61165 79 aa6.48□□□□□ -1.37
TSPAN4-219ENST00000530404 KRTAP25-1Q3LHN0 102 aa6.46□□□□□ -1.38
TSPAN4-219ENST00000530404 UQCR11O14957 56 aa6.43□□□□□ -1.38
TSPAN4-219ENST00000530404 KRTAP4-11Q9BYQ6 195 aa6.34□□□□□ -1.39
TSPAN4-219ENST00000530404 KRTAP19-4Q3LI73 84 aa6.32□□□□□ -1.4
TSPAN4-219ENST00000530404 KRTAP15-1Q3LI76 137 aa6.31□□□□□ -1.4
TSPAN4-219ENST00000530404 LCE3CQ5T5A8 94 aa6.3□□□□□ -1.4
TSPAN4-219ENST00000530404 MIR22HGQ0VDD5 57 aa6.28□□□□□ -1.4
TSPAN4-219ENST00000530404 KRTAP5-2Q701N4 177 aa6.28□□□□□ -1.4
TSPAN4-219ENST00000530404 KRTAP6-1Q3LI64 71 aa6.27□□□□□ -1.41
TSPAN4-219ENST00000530404 MT1AP04731 61 aa6.23□□□□□ -1.41
TSPAN4-219ENST00000530404 PCP4P48539 62 aa6.21□□□□□ -1.42
TSPAN4-219ENST00000530404 K7ERS5 55 aa6.18□□□□□ -1.42
TSPAN4-219ENST00000530404 KRTAP23-1A1A580 65 aa6.15□□□□□ -1.42
TSPAN4-219ENST00000530404 KRTAP5-8O75690 187 aa6.15□□□□□ -1.42
TSPAN4-219ENST00000530404 OBSCNQ5VST9 7968 aa6.06□□□□□ -1.44
TSPAN4-219ENST00000530404 Q1T7F1 81 aa6.06□□□□□ -1.44
TSPAN4-219ENST00000530404 KRTAP9-4Q9BYQ2 154 aa6.06□□□□□ -1.44
TSPAN4-219ENST00000530404 AHNAKQ09666 5890 aaKnown RBP6.06□□□□□ -1.44
TSPAN4-219ENST00000530404 MUC5BQ9HC84 5762 aaPredicted RBP6.06□□□□□ -1.44
TSPAN4-219ENST00000530404 KRTAP6-2Q3LI66 62 aa6.04□□□□□ -1.44
TSPAN4-219ENST00000530404 MUC5ACP98088 5654 aa6.03□□□□□ -1.44
TSPAN4-219ENST00000530404 V9GYY9 64 aa6.03□□□□□ -1.44
TSPAN4-219ENST00000530404 KRTAP9-6A8MVA2 160 aa6.01□□□□□ -1.45
TSPAN4-219ENST00000530404 RPS28P62857 69 aaKnown RBP6.01□□□□□ -1.45
TSPAN4-219ENST00000530404 PSPHP1O15172 72 aa6□□□□□ -1.45
TSPAN4-219ENST00000530404 KRTAP9-9Q9BYP9 154 aa5.88□□□□□ -1.47
TSPAN4-219ENST00000530404 CDC42SE1Q9NRR8 79 aa5.84□□□□□ -1.47
TSPAN4-219ENST00000530404 A6NED7 52 aa5.77□□□□□ -1.49
TSPAN4-219ENST00000530404 ROMO1P60602 79 aa5.73□□□□□ -1.49
TSPAN4-219ENST00000530404 KRTAP5-1Q6L8H4 278 aa5.71□□□□□ -1.5
TSPAN4-219ENST00000530404 MT3P25713 68 aa5.69□□□□□ -1.5
TSPAN4-219ENST00000530404 BRK1Q8WUW1 75 aa5.28□□□□□ -1.56
TSPAN4-219ENST00000530404 LCE1EQ5T753 118 aa5.27□□□□□ -1.57
TSPAN4-219ENST00000530404 LCE1BQ5T7P3 118 aa5.1□□□□□ -1.59
TSPAN4-219ENST00000530404 KRTAP4-2Q9BYR5 136 aa5.09□□□□□ -1.59
TSPAN4-219ENST00000530404 PMAIP1Q13794 54 aa4.96□□□□□ -1.62
TSPAN4-219ENST00000530404 LCE1CQ5T751 118 aa4.91□□□□□ -1.62
TSPAN4-219ENST00000530404 PRO0628Q9UI54 55 aa4.87□□□□□ -1.63
TSPAN4-219ENST00000530404 KRTAP4-12Q9BQ66 201 aa4.8□□□□□ -1.64
TSPAN4-219ENST00000530404 PRAC1Q96KF2 57 aa4.77□□□□□ -1.65
TSPAN4-219ENST00000530404 KTN1-AS1Q86SY8 53 aa4.6□□□□□ -1.67
TSPAN4-219ENST00000530404 KRTAP5-11Q6L8G4 156 aa4.49□□□□□ -1.69
TSPAN4-219ENST00000530404 LCE3DQ9BYE3 92 aa4.46□□□□□ -1.7
TSPAN4-219ENST00000530404 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.42□□□□□ -1.7
TSPAN4-219ENST00000530404 LCE1FQ5T754 118 aa4.41□□□□□ -1.7
TSPAN4-219ENST00000530404 SVIPQ8NHG7 77 aa4.31□□□□□ -1.72
TSPAN4-219ENST00000530404 PHGR1C9JFL3 82 aa4.22□□□□□ -1.73
TSPAN4-219ENST00000530404 LCE3EQ5T5B0 92 aa4.14□□□□□ -1.75
TSPAN4-219ENST00000530404 KRTAP21-2Q3LI59 83 aa4.11□□□□□ -1.75
TSPAN4-219ENST00000530404 LUZP6Q538Z0 58 aa3.89□□□□□ -1.79
TSPAN4-219ENST00000530404 KRTAP4-4Q9BYR3 166 aa3.89□□□□□ -1.79
TSPAN4-219ENST00000530404 MUC19Q7Z5P9 8384 aa3.75□□□□□ -1.81
TSPAN4-219ENST00000530404 NDUFAF8A1L188 74 aa3.44□□□□□ -1.86
TSPAN4-219ENST00000530404 KRTAP21-1Q3LI58 79 aa3.16□□□□□ -1.9
TSPAN4-219ENST00000530404 PRM1P04553 51 aa2.96□□□□□ -1.94
TSPAN4-219ENST00000530404 INE1O15225 51 aa2.8□□□□□ -1.96
TSPAN4-219ENST00000530404 A0A0A0MQY5 61 aa2.79□□□□□ -1.96
TSPAN4-219ENST00000530404 MUC16Q8WXI7 14507 aa2.68□□□□□ -1.98
TSPAN4-219ENST00000530404 H3BS24 57 aa1.95□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 193.3 ms