RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 H3BS24 57 aa4.02□□□□□ -1.77
AMBRA1-207ENST00000529553 A0A0D9SG42 100 aa4.01□□□□□ -1.77
AMBRA1-207ENST00000529553 AHNAKQ09666 5890 aaKnown RBP3.98□□□□□ -1.77
AMBRA1-207ENST00000529553 KRTAP12-4P60329 112 aa3.96□□□□□ -1.78
AMBRA1-207ENST00000529553 SEC61GP60059 68 aa3.95□□□□□ -1.78
AMBRA1-207ENST00000529553 SERP1Q9Y6X1 66 aa3.95□□□□□ -1.78
AMBRA1-207ENST00000529553 A0A1B0GU33 70 aa3.93□□□□□ -1.78
AMBRA1-207ENST00000529553 LINC01558Q9Y6Z2 57 aa3.93□□□□□ -1.78
AMBRA1-207ENST00000529553 A0A1B0GU69 56 aa3.92□□□□□ -1.78
AMBRA1-207ENST00000529553 SPATA8Q6RVD6 105 aa3.92□□□□□ -1.78
AMBRA1-207ENST00000529553 MUC5ACP98088 5654 aa3.91□□□□□ -1.78
AMBRA1-207ENST00000529553 KRTAP5-5Q701N2 237 aaPredicted RBP3.9□□□□□ -1.79
AMBRA1-207ENST00000529553 KRTAP4-11Q9BYQ6 195 aa3.88□□□□□ -1.79
AMBRA1-207ENST00000529553 MUC5BQ9HC84 5762 aaPredicted RBP3.87□□□□□ -1.79
AMBRA1-207ENST00000529553 A8MU10 97 aa3.83□□□□□ -1.8
AMBRA1-207ENST00000529553 KRTAP12-1P59990 96 aa3.83□□□□□ -1.8
AMBRA1-207ENST00000529553 PRR15LQ9BU68 103 aa3.83□□□□□ -1.8
AMBRA1-207ENST00000529553 Q1T7F1 81 aa3.8□□□□□ -1.8
AMBRA1-207ENST00000529553 SMIM26A0A096LP01 95 aa3.79□□□□□ -1.8
AMBRA1-207ENST00000529553 RPS28P62857 69 aaKnown RBP3.79□□□□□ -1.8
AMBRA1-207ENST00000529553 KRTAP4-7Q9BYR0 210 aa3.79□□□□□ -1.8
AMBRA1-207ENST00000529553 C10orf95Q9H7T3 257 aa3.79□□□□□ -1.8
AMBRA1-207ENST00000529553 SPINT4Q6UDR6 99 aa3.77□□□□□ -1.81
AMBRA1-207ENST00000529553 KRTAP5-8O75690 187 aa3.76□□□□□ -1.81
AMBRA1-207ENST00000529553 V9GYY9 64 aa3.76□□□□□ -1.81
AMBRA1-207ENST00000529553 A0A0A0MQY5 61 aa3.75□□□□□ -1.81
AMBRA1-207ENST00000529553 UQCR11O14957 56 aa3.74□□□□□ -1.81
AMBRA1-207ENST00000529553 PSPHP1O15172 72 aa3.74□□□□□ -1.81
AMBRA1-207ENST00000529553 SYNE1Q8NF91 8797 aaKnown RBP3.73□□□□□ -1.81
AMBRA1-207ENST00000529553 LCE3AQ5TA76 89 aa3.72□□□□□ -1.81
AMBRA1-207ENST00000529553 MIR22HGQ0VDD5 57 aa3.69□□□□□ -1.82
AMBRA1-207ENST00000529553 KRTAP5-2Q701N4 177 aa3.68□□□□□ -1.82
AMBRA1-207ENST00000529553 KRTAP9-9Q9BYP9 154 aa3.67□□□□□ -1.82
AMBRA1-207ENST00000529553 LOC100996750A0A140TA64 210 aa3.62□□□□□ -1.83
AMBRA1-207ENST00000529553 TNP1P09430 55 aa3.61□□□□□ -1.83
AMBRA1-207ENST00000529553 KRTAP12-3P60328 96 aa3.6□□□□□ -1.83
AMBRA1-207ENST00000529553 A6NED7 52 aa3.59□□□□□ -1.83
AMBRA1-207ENST00000529553 CDC42SE1Q9NRR8 79 aa3.52□□□□□ -1.85
AMBRA1-207ENST00000529553 OBSCNQ5VST9 7968 aa3.52□□□□□ -1.85
AMBRA1-207ENST00000529553 K7ERS5 55 aa3.5□□□□□ -1.85
AMBRA1-207ENST00000529553 KRTAP19-4Q3LI73 84 aa3.5□□□□□ -1.85
AMBRA1-207ENST00000529553 KRTAP23-1A1A580 65 aa3.49□□□□□ -1.85
AMBRA1-207ENST00000529553 KRTAP9-4Q9BYQ2 154 aa3.46□□□□□ -1.86
AMBRA1-207ENST00000529553 MT1AP04731 61 aa3.45□□□□□ -1.86
AMBRA1-207ENST00000529553 KRTAP25-1Q3LHN0 102 aa3.45□□□□□ -1.86
AMBRA1-207ENST00000529553 KRTAP6-1Q3LI64 71 aa3.44□□□□□ -1.86
AMBRA1-207ENST00000529553 KRTAP6-2Q3LI66 62 aa3.4□□□□□ -1.87
AMBRA1-207ENST00000529553 KRTAP5-1Q6L8H4 278 aa3.4□□□□□ -1.87
AMBRA1-207ENST00000529553 ROMO1P60602 79 aa3.38□□□□□ -1.87
AMBRA1-207ENST00000529553 BRK1Q8WUW1 75 aa3.31□□□□□ -1.88
AMBRA1-207ENST00000529553 LCE3CQ5T5A8 94 aa3.28□□□□□ -1.88
AMBRA1-207ENST00000529553 MT3P25713 68 aa3.22□□□□□ -1.89
AMBRA1-207ENST00000529553 KRTAP15-1Q3LI76 137 aa3.2□□□□□ -1.9
AMBRA1-207ENST00000529553 PMAIP1Q13794 54 aa3.12□□□□□ -1.91
AMBRA1-207ENST00000529553 PRO0628Q9UI54 55 aa3.12□□□□□ -1.91
AMBRA1-207ENST00000529553 LCE1EQ5T753 118 aa3.11□□□□□ -1.91
AMBRA1-207ENST00000529553 PRAC1Q96KF2 57 aa3.08□□□□□ -1.92
AMBRA1-207ENST00000529553 KRTAP9-6A8MVA2 160 aa3.07□□□□□ -1.92
AMBRA1-207ENST00000529553 KRTAP4-2Q9BYR5 136 aa2.93□□□□□ -1.94
AMBRA1-207ENST00000529553 KTN1-AS1Q86SY8 53 aa2.9□□□□□ -1.95
AMBRA1-207ENST00000529553 LCE1BQ5T7P3 118 aa2.89□□□□□ -1.95
AMBRA1-207ENST00000529553 LCE1CQ5T751 118 aa2.87□□□□□ -1.95
AMBRA1-207ENST00000529553 KRTAP4-12Q9BQ66 201 aa2.82□□□□□ -1.96
AMBRA1-207ENST00000529553 KRTAP5-11Q6L8G4 156 aa2.75□□□□□ -1.97
AMBRA1-207ENST00000529553 LUZP6Q538Z0 58 aa2.73□□□□□ -1.97
AMBRA1-207ENST00000529553 LCE1FQ5T754 118 aa2.73□□□□□ -1.97
AMBRA1-207ENST00000529553 NDUFAF8A1L188 74 aa2.72□□□□□ -1.97
AMBRA1-207ENST00000529553 PHGR1C9JFL3 82 aa2.67□□□□□ -1.98
AMBRA1-207ENST00000529553 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.55□□□□□ -2
AMBRA1-207ENST00000529553 KRTAP21-2Q3LI59 83 aa2.29□□□□□ -2.04
AMBRA1-207ENST00000529553 LCE3DQ9BYE3 92 aa2.27□□□□□ -2.05
AMBRA1-207ENST00000529553 MUC19Q7Z5P9 8384 aa2.2□□□□□ -2.06
AMBRA1-207ENST00000529553 LCE3EQ5T5B0 92 aa2.17□□□□□ -2.06
AMBRA1-207ENST00000529553 KRTAP4-4Q9BYR3 166 aa2.13□□□□□ -2.07
AMBRA1-207ENST00000529553 KRTAP21-1Q3LI58 79 aa2.07□□□□□ -2.08
AMBRA1-207ENST00000529553 INE1O15225 51 aa2.04□□□□□ -2.08
AMBRA1-207ENST00000529553 PRM1P04553 51 aa1.76□□□□□ -2.13
AMBRA1-207ENST00000529553 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 11.3 ms