RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 KRTAP12-3P60328 96 aa11.41□□□□□ -0.58
SSSCA1-205ENST00000527920 LCE4AQ5TA78 99 aa11.39□□□□□ -0.59
SSSCA1-205ENST00000527920 V9GYY9 64 aa11.37□□□□□ -0.59
SSSCA1-205ENST00000527920 KRTAP4-3Q9BYR4 195 aa11.36□□□□□ -0.59
SSSCA1-205ENST00000527920 KRTAP25-1Q3LHN0 102 aa11.33□□□□□ -0.6
SSSCA1-205ENST00000527920 LCE1DQ5T752 114 aa11.32□□□□□ -0.6
SSSCA1-205ENST00000527920 K7ERS5 55 aa11.3□□□□□ -0.6
SSSCA1-205ENST00000527920 Q1T7F1 81 aa11.27□□□□□ -0.61
SSSCA1-205ENST00000527920 GPR98Q8WXG9 6306 aa11.24□□□□□ -0.61
SSSCA1-205ENST00000527920 PSPHP1O15172 72 aa11.22□□□□□ -0.61
SSSCA1-205ENST00000527920 KRTAP5-4Q6L8H1 288 aa11.2□□□□□ -0.62
SSSCA1-205ENST00000527920 MT4P47944 62 aa11.16□□□□□ -0.62
SSSCA1-205ENST00000527920 HMCN1Q96RW7 5635 aa11.15□□□□□ -0.62
SSSCA1-205ENST00000527920 KRTAP4-7Q9BYR0 210 aa11.12□□□□□ -0.63
SSSCA1-205ENST00000527920 KRTAP23-1A1A580 65 aa10.95□□□□□ -0.66
SSSCA1-205ENST00000527920 KRTAP19-4Q3LI73 84 aa10.91□□□□□ -0.66
SSSCA1-205ENST00000527920 A6NED7 52 aa10.87□□□□□ -0.67
SSSCA1-205ENST00000527920 KRTAP4-6Q9BYQ5 205 aa10.87□□□□□ -0.67
SSSCA1-205ENST00000527920 KRTAP5-5Q701N2 237 aaPredicted RBP10.78□□□□□ -0.68
SSSCA1-205ENST00000527920 RPS28P62857 69 aaKnown RBP10.69□□□□□ -0.7
SSSCA1-205ENST00000527920 KRTAP15-1Q3LI76 137 aa10.69□□□□□ -0.7
SSSCA1-205ENST00000527920 CDC42SE1Q9NRR8 79 aa10.69□□□□□ -0.7
SSSCA1-205ENST00000527920 AHNAK2Q8IVF2 5795 aa10.69□□□□□ -0.7
SSSCA1-205ENST00000527920 SPRR5A0A1B0GTR4 108 aa10.54□□□□□ -0.72
SSSCA1-205ENST00000527920 LOC100996750A0A140TA64 210 aa10.53□□□□□ -0.72
SSSCA1-205ENST00000527920 KRTAP20-2Q3LI61 65 aa10.53□□□□□ -0.72
SSSCA1-205ENST00000527920 KRTAP5-10Q6L8G5 202 aa10.53□□□□□ -0.72
SSSCA1-205ENST00000527920 LCE3CQ5T5A8 94 aa10.52□□□□□ -0.73
SSSCA1-205ENST00000527920 ROMO1P60602 79 aa10.51□□□□□ -0.73
SSSCA1-205ENST00000527920 KRTAP12-4P60329 112 aa10.48□□□□□ -0.73
SSSCA1-205ENST00000527920 PCP4P48539 62 aa10.41□□□□□ -0.74
SSSCA1-205ENST00000527920 KRTAP5-3Q6L8H2 238 aa10.29□□□□□ -0.76
SSSCA1-205ENST00000527920 SYNE1Q8NF91 8797 aaKnown RBP10.21□□□□□ -0.77
SSSCA1-205ENST00000527920 KRTAP5-7Q6L8G8 165 aa10.14□□□□□ -0.79
SSSCA1-205ENST00000527920 MT1AP04731 61 aa10.04□□□□□ -0.8
SSSCA1-205ENST00000527920 KRTAP6-1Q3LI64 71 aa9.93□□□□□ -0.82
SSSCA1-205ENST00000527920 KRTAP9-6A8MVA2 160 aa9.9□□□□□ -0.82
SSSCA1-205ENST00000527920 KRTAP5-2Q701N4 177 aa9.83□□□□□ -0.84
SSSCA1-205ENST00000527920 KRTAP9-4Q9BYQ2 154 aa9.68□□□□□ -0.86
SSSCA1-205ENST00000527920 KRTAP4-11Q9BYQ6 195 aa9.61□□□□□ -0.87
SSSCA1-205ENST00000527920 KRTAP6-2Q3LI66 62 aa9.48□□□□□ -0.89
SSSCA1-205ENST00000527920 BRK1Q8WUW1 75 aa9.29□□□□□ -0.92
SSSCA1-205ENST00000527920 KRTAP5-8O75690 187 aa9.28□□□□□ -0.92
SSSCA1-205ENST00000527920 MT3P25713 68 aa9.18□□□□□ -0.94
SSSCA1-205ENST00000527920 OBSCNQ5VST9 7968 aa9.06□□□□□ -0.96
SSSCA1-205ENST00000527920 MUC5BQ9HC84 5762 aaPredicted RBP8.82□□□□□ -1
SSSCA1-205ENST00000527920 MUC5ACP98088 5654 aa8.81□□□□□ -1
SSSCA1-205ENST00000527920 KRTAP9-9Q9BYP9 154 aa8.79□□□□□ -1
SSSCA1-205ENST00000527920 KRTAP5-1Q6L8H4 278 aa8.78□□□□□ -1
SSSCA1-205ENST00000527920 AHNAKQ09666 5890 aaKnown RBP8.78□□□□□ -1
SSSCA1-205ENST00000527920 PMAIP1Q13794 54 aa8.74□□□□□ -1.01
SSSCA1-205ENST00000527920 LCE1EQ5T753 118 aa8.48□□□□□ -1.05
SSSCA1-205ENST00000527920 PRAC1Q96KF2 57 aa8.39□□□□□ -1.07
SSSCA1-205ENST00000527920 PRO0628Q9UI54 55 aa8.05□□□□□ -1.12
SSSCA1-205ENST00000527920 KRTAP4-2Q9BYR5 136 aa7.95□□□□□ -1.14
SSSCA1-205ENST00000527920 LCE1BQ5T7P3 118 aa7.86□□□□□ -1.15
SSSCA1-205ENST00000527920 LCE1CQ5T751 118 aa7.85□□□□□ -1.15
SSSCA1-205ENST00000527920 KTN1-AS1Q86SY8 53 aa7.73□□□□□ -1.17
SSSCA1-205ENST00000527920 LCE3DQ9BYE3 92 aa7.58□□□□□ -1.2
SSSCA1-205ENST00000527920 SVIPQ8NHG7 77 aa7.37□□□□□ -1.23
SSSCA1-205ENST00000527920 LUZP6Q538Z0 58 aa7.18□□□□□ -1.26
SSSCA1-205ENST00000527920 KRTAP5-6Q6L8G9 129 aaPredicted RBP7.18□□□□□ -1.26
SSSCA1-205ENST00000527920 LCE3EQ5T5B0 92 aa7.14□□□□□ -1.27
SSSCA1-205ENST00000527920 KRTAP5-11Q6L8G4 156 aa7.12□□□□□ -1.27
SSSCA1-205ENST00000527920 KRTAP4-12Q9BQ66 201 aa7.1□□□□□ -1.27
SSSCA1-205ENST00000527920 LCE1FQ5T754 118 aa6.93□□□□□ -1.3
SSSCA1-205ENST00000527920 KRTAP21-2Q3LI59 83 aa6.57□□□□□ -1.36
SSSCA1-205ENST00000527920 PHGR1C9JFL3 82 aa6.13□□□□□ -1.43
SSSCA1-205ENST00000527920 KRTAP4-4Q9BYR3 166 aa5.91□□□□□ -1.46
SSSCA1-205ENST00000527920 NDUFAF8A1L188 74 aa5.59□□□□□ -1.51
SSSCA1-205ENST00000527920 MUC19Q7Z5P9 8384 aa5.57□□□□□ -1.52
SSSCA1-205ENST00000527920 PRM1P04553 51 aa5.33□□□□□ -1.56
SSSCA1-205ENST00000527920 KRTAP21-1Q3LI58 79 aa4.68□□□□□ -1.66
SSSCA1-205ENST00000527920 A0A0A0MQY5 61 aa4.53□□□□□ -1.68
SSSCA1-205ENST00000527920 INE1O15225 51 aa4.53□□□□□ -1.68
SSSCA1-205ENST00000527920 MUC16Q8WXI7 14507 aa3.95□□□□□ -1.78
SSSCA1-205ENST00000527920 H3BS24 57 aa3.36□□□□□ -1.87
Retrieved 77 of 20,778 RNA–protein pairs in 106.5 ms