RNA–Protein interactions for RNA: ENST00000527003.5

C11orf54-204, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-204ENST00000527003 KRTAP19-8Q3LI54 63 aa1.68□□□□□ -2.14
C11orf54-204ENST00000527003 PLAC4Q8WY50 150 aa1.68□□□□□ -2.14
C11orf54-204ENST00000527003 KRTAP13-4Q3LI77 160 aa1.67□□□□□ -2.14
C11orf54-204ENST00000527003 LINC01554Q52M75 96 aa1.67□□□□□ -2.14
C11orf54-204ENST00000527003 A0A0D9SG42 100 aa1.66□□□□□ -2.14
C11orf54-204ENST00000527003 CDC42SE1Q9NRR8 79 aa1.66□□□□□ -2.14
C11orf54-204ENST00000527003 SPINT4Q6UDR6 99 aa1.64□□□□□ -2.15
C11orf54-204ENST00000527003 MT1BP07438 61 aa1.63□□□□□ -2.15
C11orf54-204ENST00000527003 KRTAP12-1P59990 96 aa1.63□□□□□ -2.15
C11orf54-204ENST00000527003 CAMK2N1Q7Z7J9 78 aa1.63□□□□□ -2.15
C11orf54-204ENST00000527003 PRO2289Q9P1D8 64 aa1.63□□□□□ -2.15
C11orf54-204ENST00000527003 BRK1Q8WUW1 75 aa1.62□□□□□ -2.15
C11orf54-204ENST00000527003 MUC19Q7Z5P9 8384 aa1.61□□□□□ -2.15
C11orf54-204ENST00000527003 KRTAP19-6Q3LI70 58 aa1.6□□□□□ -2.15
C11orf54-204ENST00000527003 USH2AO75445 5202 aa1.6□□□□□ -2.15
C11orf54-204ENST00000527003 LCE3DQ9BYE3 92 aa1.59□□□□□ -2.15
C11orf54-204ENST00000527003 FSIP2Q5CZC0 6907 aa1.59□□□□□ -2.16
C11orf54-204ENST00000527003 CRCT1Q9UGL9 99 aa1.58□□□□□ -2.16
C11orf54-204ENST00000527003 PRO0628Q9UI54 55 aa1.58□□□□□ -2.16
C11orf54-204ENST00000527003 SSPOA2VEC9 5147 aa1.57□□□□□ -2.16
C11orf54-204ENST00000527003 MT1XP80297 61 aa1.57□□□□□ -2.16
C11orf54-204ENST00000527003 ROMO1P60602 79 aa1.56□□□□□ -2.16
C11orf54-204ENST00000527003 KRTAP5-7Q6L8G8 165 aa1.56□□□□□ -2.16
C11orf54-204ENST00000527003 TNP1P09430 55 aa1.55□□□□□ -2.16
C11orf54-204ENST00000527003 PMAIP1Q13794 54 aa1.55□□□□□ -2.16
C11orf54-204ENST00000527003 KRTAP25-1Q3LHN0 102 aa1.55□□□□□ -2.16
C11orf54-204ENST00000527003 C10orf95Q9H7T3 257 aa1.54□□□□□ -2.16
C11orf54-204ENST00000527003 PP632Q6XCG6 107 aa1.52□□□□□ -2.17
C11orf54-204ENST00000527003 FCGBPQ9Y6R7 5405 aaPredicted RBP1.51□□□□□ -2.17
C11orf54-204ENST00000527003 KTN1-AS1Q86SY8 53 aa1.46□□□□□ -2.18
C11orf54-204ENST00000527003 KRTAP8-1Q8IUC2 63 aa1.46□□□□□ -2.18
C11orf54-204ENST00000527003 MACF1Q9UPN3 7388 aaKnown RBP1.44□□□□□ -2.18
C11orf54-204ENST00000527003 KRTAP6-3Q3LI67 103 aa1.43□□□□□ -2.18
C11orf54-204ENST00000527003 KRTAP12-3P60328 96 aa1.42□□□□□ -2.18
C11orf54-204ENST00000527003 SYNE2Q8WXH0 6885 aaKnown RBP1.41□□□□□ -2.18
C11orf54-204ENST00000527003 KRTAP19-5Q3LI72 72 aa1.41□□□□□ -2.18
C11orf54-204ENST00000527003 KRTAP21-2Q3LI59 83 aa1.4□□□□□ -2.19
C11orf54-204ENST00000527003 KRTAP19-7Q3SYF9 63 aa1.4□□□□□ -2.19
C11orf54-204ENST00000527003 SPRR2FQ96RM1 72 aa1.4□□□□□ -2.19
C11orf54-204ENST00000527003 KMT2DO14686 5537 aa1.4□□□□□ -2.19
C11orf54-204ENST00000527003 MT1EP04732 61 aa1.39□□□□□ -2.19
C11orf54-204ENST00000527003 MT1GP13640 62 aa1.36□□□□□ -2.19
C11orf54-204ENST00000527003 KRTAP19-3Q7Z4W3 81 aa1.36□□□□□ -2.19
C11orf54-204ENST00000527003 MT1LQ93083 61 aa1.35□□□□□ -2.19
C11orf54-204ENST00000527003 SPRR2EP22531 72 aa1.34□□□□□ -2.19
C11orf54-204ENST00000527003 SPRR2BP35325 72 aa1.34□□□□□ -2.19
C11orf54-204ENST00000527003 SPRR2AP35326 72 aa1.34□□□□□ -2.19
C11orf54-204ENST00000527003 MUC12Q9UKN1 5478 aa1.34□□□□□ -2.2
C11orf54-204ENST00000527003 NEBP20929 6669 aa1.33□□□□□ -2.2
C11orf54-204ENST00000527003 SPRR5A0A1B0GTR4 108 aa1.33□□□□□ -2.2
C11orf54-204ENST00000527003 MDN1Q9NU22 5596 aa1.32□□□□□ -2.2
C11orf54-204ENST00000527003 SPRR2DP22532 72 aa1.31□□□□□ -2.2
C11orf54-204ENST00000527003 MT1MQ8N339 61 aa1.31□□□□□ -2.2
C11orf54-204ENST00000527003 LUZP6Q538Z0 58 aa1.29□□□□□ -2.2
C11orf54-204ENST00000527003 KRTAP2-3P0C7H8 128 aa1.27□□□□□ -2.21
C11orf54-204ENST00000527003 KRTAP2-4Q9BYR9 128 aa1.27□□□□□ -2.21
C11orf54-204ENST00000527003 KRTAP20-1Q3LI63 56 aa1.25□□□□□ -2.21
C11orf54-204ENST00000527003 KRTAP2-1Q9BYU5 128 aa1.24□□□□□ -2.21
C11orf54-204ENST00000527003 HMCN1Q96RW7 5635 aa1.19□□□□□ -2.22
C11orf54-204ENST00000527003 DSTQ03001 7570 aaKnown RBP1.18□□□□□ -2.22
C11orf54-204ENST00000527003 MT1AP04731 61 aa1.16□□□□□ -2.22
C11orf54-204ENST00000527003 KRTAP12-4P60329 112 aa1.16□□□□□ -2.22
C11orf54-204ENST00000527003 KRTAP6-1Q3LI64 71 aa1.12□□□□□ -2.23
C11orf54-204ENST00000527003 MT4P47944 62 aa1.11□□□□□ -2.23
C11orf54-204ENST00000527003 KRTAP20-2Q3LI61 65 aa1.09□□□□□ -2.23
C11orf54-204ENST00000527003 SYNE1Q8NF91 8797 aaKnown RBP1.07□□□□□ -2.24
C11orf54-204ENST00000527003 KRTAP6-2Q3LI66 62 aa1.05□□□□□ -2.24
C11orf54-204ENST00000527003 AHNAK2Q8IVF2 5795 aa1□□□□□ -2.25
C11orf54-204ENST00000527003 GPR98Q8WXG9 6306 aa0.99□□□□□ -2.25
C11orf54-204ENST00000527003 INE1O15225 51 aa0.97□□□□□ -2.25
C11orf54-204ENST00000527003 KRTAP5-10Q6L8G5 202 aa0.96□□□□□ -2.26
C11orf54-204ENST00000527003 MUC5ACP98088 5654 aa0.88□□□□□ -2.27
C11orf54-204ENST00000527003 MUC5BQ9HC84 5762 aaPredicted RBP0.82□□□□□ -2.28
C11orf54-204ENST00000527003 AHNAKQ09666 5890 aaKnown RBP0.81□□□□□ -2.28
C11orf54-204ENST00000527003 PRM1P04553 51 aa0.78□□□□□ -2.28
C11orf54-204ENST00000527003 PHGR1C9JFL3 82 aa0.66□□□□□ -2.3
C11orf54-204ENST00000527003 MUC16Q8WXI7 14507 aa0.6□□□□□ -2.31
C11orf54-204ENST00000527003 KRTAP21-1Q3LI58 79 aa0.48□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 96.6 ms