RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 TNP1P09430 55 aa4.18□□□□□ -1.74
SSBP3-210ENST00000525990 LCE4AQ5TA78 99 aa4.18□□□□□ -1.74
SSBP3-210ENST00000525990 KRTAP4-7Q9BYR0 210 aa4.15□□□□□ -1.75
SSBP3-210ENST00000525990 KRTAP5-4Q6L8H1 288 aa4.13□□□□□ -1.75
SSBP3-210ENST00000525990 HMCN1Q96RW7 5635 aa4.1□□□□□ -1.75
SSBP3-210ENST00000525990 LINC01558Q9Y6Z2 57 aa4.09□□□□□ -1.75
SSBP3-210ENST00000525990 PRR15LQ9BU68 103 aa4.08□□□□□ -1.76
SSBP3-210ENST00000525990 KRTAP12-3P60328 96 aa4.07□□□□□ -1.76
SSBP3-210ENST00000525990 ATP5EP56381 51 aaPredicted RBP4.06□□□□□ -1.76
SSBP3-210ENST00000525990 KRTAP5-10Q6L8G5 202 aa4□□□□□ -1.77
SSBP3-210ENST00000525990 UQCR11O14957 56 aa3.98□□□□□ -1.77
SSBP3-210ENST00000525990 AHNAK2Q8IVF2 5795 aa3.98□□□□□ -1.77
SSBP3-210ENST00000525990 TMEM258P61165 79 aa3.95□□□□□ -1.78
SSBP3-210ENST00000525990 KRTAP5-5Q701N2 237 aaPredicted RBP3.95□□□□□ -1.78
SSBP3-210ENST00000525990 KRTAP20-2Q3LI61 65 aa3.92□□□□□ -1.78
SSBP3-210ENST00000525990 MIR22HGQ0VDD5 57 aa3.9□□□□□ -1.79
SSBP3-210ENST00000525990 KRTAP25-1Q3LHN0 102 aa3.9□□□□□ -1.79
SSBP3-210ENST00000525990 KRTAP5-3Q6L8H2 238 aa3.89□□□□□ -1.79
SSBP3-210ENST00000525990 H3BS24 57 aa3.87□□□□□ -1.79
SSBP3-210ENST00000525990 SPRR5A0A1B0GTR4 108 aa3.83□□□□□ -1.8
SSBP3-210ENST00000525990 PSPHP1O15172 72 aa3.83□□□□□ -1.8
SSBP3-210ENST00000525990 KRTAP5-7Q6L8G8 165 aa3.83□□□□□ -1.8
SSBP3-210ENST00000525990 KRTAP4-12Q9BQ66 201 aa3.81□□□□□ -1.8
SSBP3-210ENST00000525990 KRTAP12-4P60329 112 aa3.79□□□□□ -1.8
SSBP3-210ENST00000525990 K7ERS5 55 aa3.78□□□□□ -1.8
SSBP3-210ENST00000525990 SYNE1Q8NF91 8797 aaKnown RBP3.76□□□□□ -1.81
SSBP3-210ENST00000525990 KRTAP15-1Q3LI76 137 aa3.76□□□□□ -1.81
SSBP3-210ENST00000525990 LCE3CQ5T5A8 94 aa3.74□□□□□ -1.81
SSBP3-210ENST00000525990 Q1T7F1 81 aa3.73□□□□□ -1.81
SSBP3-210ENST00000525990 KRTAP9-9Q9BYP9 154 aa3.71□□□□□ -1.82
SSBP3-210ENST00000525990 KRTAP9-4Q9BYQ2 154 aa3.71□□□□□ -1.82
SSBP3-210ENST00000525990 KRTAP23-1A1A580 65 aa3.7□□□□□ -1.82
SSBP3-210ENST00000525990 KRTAP19-4Q3LI73 84 aa3.7□□□□□ -1.82
SSBP3-210ENST00000525990 V9GYY9 64 aa3.7□□□□□ -1.82
SSBP3-210ENST00000525990 KRTAP6-1Q3LI64 71 aa3.66□□□□□ -1.82
SSBP3-210ENST00000525990 A6NED7 52 aa3.65□□□□□ -1.83
SSBP3-210ENST00000525990 MT1AP04731 61 aa3.63□□□□□ -1.83
SSBP3-210ENST00000525990 KRTAP9-6A8MVA2 160 aa3.61□□□□□ -1.83
SSBP3-210ENST00000525990 KRTAP5-2Q701N4 177 aa3.61□□□□□ -1.83
SSBP3-210ENST00000525990 CDC42SE1Q9NRR8 79 aa3.61□□□□□ -1.83
SSBP3-210ENST00000525990 KRTAP4-11Q9BYQ6 195 aa3.58□□□□□ -1.84
SSBP3-210ENST00000525990 SVIPQ8NHG7 77 aa3.57□□□□□ -1.84
SSBP3-210ENST00000525990 ROMO1P60602 79 aa3.56□□□□□ -1.84
SSBP3-210ENST00000525990 RPS28P62857 69 aaKnown RBP3.51□□□□□ -1.85
SSBP3-210ENST00000525990 KRTAP6-2Q3LI66 62 aa3.5□□□□□ -1.85
SSBP3-210ENST00000525990 KRTAP5-8O75690 187 aa3.48□□□□□ -1.85
SSBP3-210ENST00000525990 OBSCNQ5VST9 7968 aa3.38□□□□□ -1.87
SSBP3-210ENST00000525990 KRTAP4-2Q9BYR5 136 aa3.36□□□□□ -1.87
SSBP3-210ENST00000525990 PCP4P48539 62 aa3.3□□□□□ -1.88
SSBP3-210ENST00000525990 MUC5ACP98088 5654 aa3.29□□□□□ -1.88
SSBP3-210ENST00000525990 MT3P25713 68 aa3.29□□□□□ -1.88
SSBP3-210ENST00000525990 KRTAP5-1Q6L8H4 278 aa3.26□□□□□ -1.89
SSBP3-210ENST00000525990 MUC5BQ9HC84 5762 aaPredicted RBP3.24□□□□□ -1.89
SSBP3-210ENST00000525990 AHNAKQ09666 5890 aaKnown RBP3.22□□□□□ -1.89
SSBP3-210ENST00000525990 LCE1EQ5T753 118 aa3.02□□□□□ -1.93
SSBP3-210ENST00000525990 BRK1Q8WUW1 75 aa3.02□□□□□ -1.93
SSBP3-210ENST00000525990 A0A0A0MQY5 61 aa2.96□□□□□ -1.94
SSBP3-210ENST00000525990 LCE1BQ5T7P3 118 aa2.93□□□□□ -1.94
SSBP3-210ENST00000525990 PRAC1Q96KF2 57 aa2.83□□□□□ -1.96
SSBP3-210ENST00000525990 LCE1CQ5T751 118 aa2.82□□□□□ -1.96
SSBP3-210ENST00000525990 PMAIP1Q13794 54 aa2.8□□□□□ -1.96
SSBP3-210ENST00000525990 LCE3DQ9BYE3 92 aa2.66□□□□□ -1.98
SSBP3-210ENST00000525990 KRTAP5-11Q6L8G4 156 aa2.58□□□□□ -2
SSBP3-210ENST00000525990 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.56□□□□□ -2
SSBP3-210ENST00000525990 LCE3EQ5T5B0 92 aa2.48□□□□□ -2.01
SSBP3-210ENST00000525990 LCE1FQ5T754 118 aa2.48□□□□□ -2.01
SSBP3-210ENST00000525990 PRO0628Q9UI54 55 aa2.44□□□□□ -2.02
SSBP3-210ENST00000525990 KRTAP21-2Q3LI59 83 aa2.4□□□□□ -2.03
SSBP3-210ENST00000525990 KTN1-AS1Q86SY8 53 aa2.39□□□□□ -2.03
SSBP3-210ENST00000525990 PHGR1C9JFL3 82 aa2.33□□□□□ -2.04
SSBP3-210ENST00000525990 NDUFAF8A1L188 74 aa2.28□□□□□ -2.04
SSBP3-210ENST00000525990 LUZP6Q538Z0 58 aa2.26□□□□□ -2.05
SSBP3-210ENST00000525990 KRTAP4-4Q9BYR3 166 aa2.26□□□□□ -2.05
SSBP3-210ENST00000525990 MUC19Q7Z5P9 8384 aa2.09□□□□□ -2.08
SSBP3-210ENST00000525990 PRM1P04553 51 aa1.85□□□□□ -2.11
SSBP3-210ENST00000525990 KRTAP21-1Q3LI58 79 aa1.73□□□□□ -2.13
SSBP3-210ENST00000525990 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
SSBP3-210ENST00000525990 INE1O15225 51 aa1.27□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 28.9 ms