RNA–Protein interactions for RNA: ENST00000525238.2

ABCA7-207, Transcript of ATP binding cassette subfamily A member 7, humanhuman

TSL 1 (best)

Gene ABCA7, Length 1,100 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA7-207ENST00000525238 Q1T7F1 81 aa6.84□□□□□ -1.31
ABCA7-207ENST00000525238 LCE3AQ5TA76 89 aa6.84□□□□□ -1.31
ABCA7-207ENST00000525238 C10orf95Q9H7T3 257 aa6.84□□□□□ -1.31
ABCA7-207ENST00000525238 MT4P47944 62 aa6.83□□□□□ -1.32
ABCA7-207ENST00000525238 UQCR11O14957 56 aa6.81□□□□□ -1.32
ABCA7-207ENST00000525238 LCE4AQ5TA78 99 aa6.81□□□□□ -1.32
ABCA7-207ENST00000525238 V9GYY9 64 aa6.81□□□□□ -1.32
ABCA7-207ENST00000525238 PSPHP1O15172 72 aa6.8□□□□□ -1.32
ABCA7-207ENST00000525238 RPS28P62857 69 aaKnown RBP6.76□□□□□ -1.33
ABCA7-207ENST00000525238 KRTAP4-3Q9BYR4 195 aa6.75□□□□□ -1.33
ABCA7-207ENST00000525238 HMCN1Q96RW7 5635 aa6.71□□□□□ -1.33
ABCA7-207ENST00000525238 MIR22HGQ0VDD5 57 aa6.71□□□□□ -1.34
ABCA7-207ENST00000525238 KRTAP5-4Q6L8H1 288 aa6.6□□□□□ -1.35
ABCA7-207ENST00000525238 KRTAP12-3P60328 96 aa6.57□□□□□ -1.36
ABCA7-207ENST00000525238 A6NED7 52 aa6.55□□□□□ -1.36
ABCA7-207ENST00000525238 KRTAP4-6Q9BYQ5 205 aa6.55□□□□□ -1.36
ABCA7-207ENST00000525238 KRTAP4-7Q9BYR0 210 aa6.55□□□□□ -1.36
ABCA7-207ENST00000525238 AHNAK2Q8IVF2 5795 aa6.54□□□□□ -1.36
ABCA7-207ENST00000525238 K7ERS5 55 aa6.45□□□□□ -1.38
ABCA7-207ENST00000525238 KRTAP5-10Q6L8G5 202 aa6.42□□□□□ -1.38
ABCA7-207ENST00000525238 KRTAP25-1Q3LHN0 102 aa6.34□□□□□ -1.39
ABCA7-207ENST00000525238 CDC42SE1Q9NRR8 79 aa6.34□□□□□ -1.39
ABCA7-207ENST00000525238 KRTAP20-2Q3LI61 65 aa6.29□□□□□ -1.4
ABCA7-207ENST00000525238 KRTAP5-5Q701N2 237 aaPredicted RBP6.27□□□□□ -1.41
ABCA7-207ENST00000525238 KRTAP5-3Q6L8H2 238 aa6.26□□□□□ -1.41
ABCA7-207ENST00000525238 KRTAP12-4P60329 112 aa6.23□□□□□ -1.41
ABCA7-207ENST00000525238 LOC100996750A0A140TA64 210 aa6.22□□□□□ -1.41
ABCA7-207ENST00000525238 SPRR5A0A1B0GTR4 108 aa6.21□□□□□ -1.42
ABCA7-207ENST00000525238 KRTAP5-7Q6L8G8 165 aa6.18□□□□□ -1.42
ABCA7-207ENST00000525238 ROMO1P60602 79 aa6.14□□□□□ -1.43
ABCA7-207ENST00000525238 SYNE1Q8NF91 8797 aaKnown RBP6.11□□□□□ -1.43
ABCA7-207ENST00000525238 KRTAP19-4Q3LI73 84 aa6.1□□□□□ -1.43
ABCA7-207ENST00000525238 KRTAP15-1Q3LI76 137 aa6.07□□□□□ -1.44
ABCA7-207ENST00000525238 KRTAP23-1A1A580 65 aa6.06□□□□□ -1.44
ABCA7-207ENST00000525238 LCE3CQ5T5A8 94 aa6.02□□□□□ -1.45
ABCA7-207ENST00000525238 BRK1Q8WUW1 75 aa6□□□□□ -1.45
ABCA7-207ENST00000525238 SVIPQ8NHG7 77 aa5.88□□□□□ -1.47
ABCA7-207ENST00000525238 MT1AP04731 61 aa5.84□□□□□ -1.47
ABCA7-207ENST00000525238 KRTAP6-1Q3LI64 71 aa5.82□□□□□ -1.48
ABCA7-207ENST00000525238 KRTAP4-11Q9BYQ6 195 aa5.78□□□□□ -1.48
ABCA7-207ENST00000525238 KRTAP5-2Q701N4 177 aa5.75□□□□□ -1.49
ABCA7-207ENST00000525238 KRTAP9-6A8MVA2 160 aa5.65□□□□□ -1.5
ABCA7-207ENST00000525238 KRTAP9-4Q9BYQ2 154 aa5.65□□□□□ -1.5
ABCA7-207ENST00000525238 PMAIP1Q13794 54 aa5.64□□□□□ -1.51
ABCA7-207ENST00000525238 KRTAP6-2Q3LI66 62 aa5.61□□□□□ -1.51
ABCA7-207ENST00000525238 KRTAP5-8O75690 187 aa5.57□□□□□ -1.52
ABCA7-207ENST00000525238 OBSCNQ5VST9 7968 aa5.54□□□□□ -1.52
ABCA7-207ENST00000525238 PRO0628Q9UI54 55 aa5.5□□□□□ -1.53
ABCA7-207ENST00000525238 PRAC1Q96KF2 57 aa5.44□□□□□ -1.54
ABCA7-207ENST00000525238 AHNAKQ09666 5890 aaKnown RBP5.4□□□□□ -1.55
ABCA7-207ENST00000525238 MUC5ACP98088 5654 aa5.39□□□□□ -1.55
ABCA7-207ENST00000525238 MUC5BQ9HC84 5762 aaPredicted RBP5.38□□□□□ -1.55
ABCA7-207ENST00000525238 MT3P25713 68 aa5.37□□□□□ -1.55
ABCA7-207ENST00000525238 KRTAP9-9Q9BYP9 154 aa5.36□□□□□ -1.55
ABCA7-207ENST00000525238 KRTAP5-1Q6L8H4 278 aa5.19□□□□□ -1.58
ABCA7-207ENST00000525238 KTN1-AS1Q86SY8 53 aa5.19□□□□□ -1.58
ABCA7-207ENST00000525238 LCE1EQ5T753 118 aa4.91□□□□□ -1.62
ABCA7-207ENST00000525238 LCE1BQ5T7P3 118 aa4.75□□□□□ -1.65
ABCA7-207ENST00000525238 KRTAP4-2Q9BYR5 136 aa4.67□□□□□ -1.66
ABCA7-207ENST00000525238 LCE1CQ5T751 118 aa4.56□□□□□ -1.68
ABCA7-207ENST00000525238 LUZP6Q538Z0 58 aa4.42□□□□□ -1.7
ABCA7-207ENST00000525238 KRTAP4-12Q9BQ66 201 aa4.36□□□□□ -1.71
ABCA7-207ENST00000525238 LCE3DQ9BYE3 92 aa4.32□□□□□ -1.72
ABCA7-207ENST00000525238 KRTAP5-11Q6L8G4 156 aa4.15□□□□□ -1.75
ABCA7-207ENST00000525238 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.1□□□□□ -1.75
ABCA7-207ENST00000525238 LCE1FQ5T754 118 aa4.06□□□□□ -1.76
ABCA7-207ENST00000525238 H3BS24 57 aa4.04□□□□□ -1.76
ABCA7-207ENST00000525238 LCE3EQ5T5B0 92 aa4.04□□□□□ -1.76
ABCA7-207ENST00000525238 NDUFAF8A1L188 74 aa3.92□□□□□ -1.78
ABCA7-207ENST00000525238 PHGR1C9JFL3 82 aa3.81□□□□□ -1.8
ABCA7-207ENST00000525238 KRTAP21-2Q3LI59 83 aa3.8□□□□□ -1.8
ABCA7-207ENST00000525238 A0A0A0MQY5 61 aa3.59□□□□□ -1.83
ABCA7-207ENST00000525238 KRTAP4-4Q9BYR3 166 aa3.59□□□□□ -1.83
ABCA7-207ENST00000525238 MUC19Q7Z5P9 8384 aa3.42□□□□□ -1.86
ABCA7-207ENST00000525238 INE1O15225 51 aa3.32□□□□□ -1.88
ABCA7-207ENST00000525238 PRM1P04553 51 aa3.19□□□□□ -1.9
ABCA7-207ENST00000525238 KRTAP21-1Q3LI58 79 aa2.87□□□□□ -1.95
ABCA7-207ENST00000525238 MUC16Q8WXI7 14507 aa2.39□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 288.4 ms