RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 UQCR11O14957 56 aa6.48□□□□□ -1.37
CAPN1-203ENST00000525013 KRTAP4-3Q9BYR4 195 aa6.45□□□□□ -1.38
CAPN1-203ENST00000525013 LCE1DQ5T752 114 aa6.44□□□□□ -1.38
CAPN1-203ENST00000525013 RPS28P62857 69 aaKnown RBP6.41□□□□□ -1.38
CAPN1-203ENST00000525013 LCE4AQ5TA78 99 aa6.41□□□□□ -1.38
CAPN1-203ENST00000525013 MT4P47944 62 aa6.4□□□□□ -1.38
CAPN1-203ENST00000525013 GPR98Q8WXG9 6306 aa6.38□□□□□ -1.39
CAPN1-203ENST00000525013 KRTAP12-3P60328 96 aa6.38□□□□□ -1.39
CAPN1-203ENST00000525013 MIR22HGQ0VDD5 57 aa6.34□□□□□ -1.39
CAPN1-203ENST00000525013 HMCN1Q96RW7 5635 aa6.32□□□□□ -1.4
CAPN1-203ENST00000525013 KRTAP4-7Q9BYR0 210 aa6.29□□□□□ -1.4
CAPN1-203ENST00000525013 KRTAP5-4Q6L8H1 288 aa6.27□□□□□ -1.41
CAPN1-203ENST00000525013 K7ERS5 55 aa6.25□□□□□ -1.41
CAPN1-203ENST00000525013 KRTAP25-1Q3LHN0 102 aa6.25□□□□□ -1.41
CAPN1-203ENST00000525013 PSPHP1O15172 72 aa6.21□□□□□ -1.42
CAPN1-203ENST00000525013 Q1T7F1 81 aa6.21□□□□□ -1.42
CAPN1-203ENST00000525013 V9GYY9 64 aa6.21□□□□□ -1.42
CAPN1-203ENST00000525013 KRTAP4-6Q9BYQ5 205 aa6.19□□□□□ -1.42
CAPN1-203ENST00000525013 AHNAK2Q8IVF2 5795 aa6.11□□□□□ -1.43
CAPN1-203ENST00000525013 KRTAP5-5Q701N2 237 aaPredicted RBP6.01□□□□□ -1.45
CAPN1-203ENST00000525013 A6NED7 52 aa5.99□□□□□ -1.45
CAPN1-203ENST00000525013 KRTAP23-1A1A580 65 aa5.98□□□□□ -1.45
CAPN1-203ENST00000525013 KRTAP5-10Q6L8G5 202 aa5.98□□□□□ -1.45
CAPN1-203ENST00000525013 KRTAP19-4Q3LI73 84 aa5.97□□□□□ -1.45
CAPN1-203ENST00000525013 LOC100996750A0A140TA64 210 aa5.96□□□□□ -1.46
CAPN1-203ENST00000525013 KRTAP20-2Q3LI61 65 aa5.94□□□□□ -1.46
CAPN1-203ENST00000525013 KRTAP15-1Q3LI76 137 aa5.94□□□□□ -1.46
CAPN1-203ENST00000525013 KRTAP12-4P60329 112 aa5.92□□□□□ -1.46
CAPN1-203ENST00000525013 SPRR5A0A1B0GTR4 108 aa5.9□□□□□ -1.46
CAPN1-203ENST00000525013 CDC42SE1Q9NRR8 79 aa5.9□□□□□ -1.46
CAPN1-203ENST00000525013 LCE3CQ5T5A8 94 aa5.86□□□□□ -1.47
CAPN1-203ENST00000525013 KRTAP5-3Q6L8H2 238 aa5.85□□□□□ -1.47
CAPN1-203ENST00000525013 BRK1Q8WUW1 75 aa5.82□□□□□ -1.48
CAPN1-203ENST00000525013 ROMO1P60602 79 aa5.79□□□□□ -1.48
CAPN1-203ENST00000525013 PRO0628Q9UI54 55 aa5.78□□□□□ -1.48
CAPN1-203ENST00000525013 SYNE1Q8NF91 8797 aaKnown RBP5.75□□□□□ -1.49
CAPN1-203ENST00000525013 KRTAP5-7Q6L8G8 165 aa5.75□□□□□ -1.49
CAPN1-203ENST00000525013 SVIPQ8NHG7 77 aa5.67□□□□□ -1.5
CAPN1-203ENST00000525013 MT1AP04731 61 aa5.61□□□□□ -1.51
CAPN1-203ENST00000525013 KRTAP6-1Q3LI64 71 aa5.59□□□□□ -1.51
CAPN1-203ENST00000525013 PMAIP1Q13794 54 aa5.53□□□□□ -1.52
CAPN1-203ENST00000525013 KRTAP9-6A8MVA2 160 aa5.51□□□□□ -1.53
CAPN1-203ENST00000525013 KRTAP5-2Q701N4 177 aa5.48□□□□□ -1.53
CAPN1-203ENST00000525013 KRTAP4-11Q9BYQ6 195 aa5.44□□□□□ -1.54
CAPN1-203ENST00000525013 KRTAP9-4Q9BYQ2 154 aa5.43□□□□□ -1.54
CAPN1-203ENST00000525013 KRTAP6-2Q3LI66 62 aa5.36□□□□□ -1.55
CAPN1-203ENST00000525013 KTN1-AS1Q86SY8 53 aa5.34□□□□□ -1.55
CAPN1-203ENST00000525013 KRTAP5-8O75690 187 aa5.24□□□□□ -1.57
CAPN1-203ENST00000525013 MT3P25713 68 aa5.15□□□□□ -1.59
CAPN1-203ENST00000525013 PRAC1Q96KF2 57 aa5.07□□□□□ -1.6
CAPN1-203ENST00000525013 OBSCNQ5VST9 7968 aa5.05□□□□□ -1.6
CAPN1-203ENST00000525013 AHNAKQ09666 5890 aaKnown RBP5.03□□□□□ -1.6
CAPN1-203ENST00000525013 KRTAP9-9Q9BYP9 154 aa5.02□□□□□ -1.61
CAPN1-203ENST00000525013 MUC5BQ9HC84 5762 aaPredicted RBP5.02□□□□□ -1.61
CAPN1-203ENST00000525013 MUC5ACP98088 5654 aa5□□□□□ -1.61
CAPN1-203ENST00000525013 KRTAP5-1Q6L8H4 278 aa4.92□□□□□ -1.62
CAPN1-203ENST00000525013 LCE1EQ5T753 118 aa4.7□□□□□ -1.66
CAPN1-203ENST00000525013 LCE1BQ5T7P3 118 aa4.5□□□□□ -1.69
CAPN1-203ENST00000525013 KRTAP4-2Q9BYR5 136 aa4.46□□□□□ -1.7
CAPN1-203ENST00000525013 LCE1CQ5T751 118 aa4.37□□□□□ -1.71
CAPN1-203ENST00000525013 LUZP6Q538Z0 58 aa4.25□□□□□ -1.73
CAPN1-203ENST00000525013 LCE3DQ9BYE3 92 aa4.23□□□□□ -1.73
CAPN1-203ENST00000525013 NDUFAF8A1L188 74 aa4.18□□□□□ -1.74
CAPN1-203ENST00000525013 KRTAP4-12Q9BQ66 201 aa4.1□□□□□ -1.75
CAPN1-203ENST00000525013 H3BS24 57 aa3.98□□□□□ -1.77
CAPN1-203ENST00000525013 LCE3EQ5T5B0 92 aa3.97□□□□□ -1.77
CAPN1-203ENST00000525013 KRTAP5-11Q6L8G4 156 aa3.96□□□□□ -1.78
CAPN1-203ENST00000525013 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.95□□□□□ -1.78
CAPN1-203ENST00000525013 LCE1FQ5T754 118 aa3.86□□□□□ -1.79
CAPN1-203ENST00000525013 A0A0A0MQY5 61 aa3.83□□□□□ -1.8
CAPN1-203ENST00000525013 KRTAP21-2Q3LI59 83 aa3.67□□□□□ -1.82
CAPN1-203ENST00000525013 INE1O15225 51 aa3.52□□□□□ -1.85
CAPN1-203ENST00000525013 PHGR1C9JFL3 82 aa3.51□□□□□ -1.85
CAPN1-203ENST00000525013 KRTAP4-4Q9BYR3 166 aa3.41□□□□□ -1.86
CAPN1-203ENST00000525013 MUC19Q7Z5P9 8384 aa3.15□□□□□ -1.9
CAPN1-203ENST00000525013 PRM1P04553 51 aa2.97□□□□□ -1.93
CAPN1-203ENST00000525013 KRTAP21-1Q3LI58 79 aa2.66□□□□□ -1.98
CAPN1-203ENST00000525013 MUC16Q8WXI7 14507 aa2.25□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 95.2 ms