RNA–Protein interactions for RNA: ENST00000524627.5

SF3B2-203, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-203ENST00000524627 A0A1B0GU33 70 aa4.43□□□□□ -1.7
SF3B2-203ENST00000524627 KRTAP5-7Q6L8G8 165 aa4.43□□□□□ -1.7
SF3B2-203ENST00000524627 SPATA8Q6RVD6 105 aa4.41□□□□□ -1.7
SF3B2-203ENST00000524627 KRTAP5-3Q6L8H2 238 aa4.4□□□□□ -1.71
SF3B2-203ENST00000524627 KRTAP12-1P59990 96 aa4.37□□□□□ -1.71
SF3B2-203ENST00000524627 C10orf95Q9H7T3 257 aa4.37□□□□□ -1.71
SF3B2-203ENST00000524627 LCE3AQ5TA76 89 aa4.35□□□□□ -1.71
SF3B2-203ENST00000524627 SMIM26A0A096LP01 95 aa4.34□□□□□ -1.71
SF3B2-203ENST00000524627 A0A1B0GU69 56 aa4.33□□□□□ -1.72
SF3B2-203ENST00000524627 KRTAP20-2Q3LI61 65 aa4.3□□□□□ -1.72
SF3B2-203ENST00000524627 LINC01558Q9Y6Z2 57 aa4.3□□□□□ -1.72
SF3B2-203ENST00000524627 KRTAP4-7Q9BYR0 210 aa4.29□□□□□ -1.72
SF3B2-203ENST00000524627 SPRR5A0A1B0GTR4 108 aa4.28□□□□□ -1.72
SF3B2-203ENST00000524627 V9GYY9 64 aa4.28□□□□□ -1.72
SF3B2-203ENST00000524627 TNP1P09430 55 aa4.24□□□□□ -1.73
SF3B2-203ENST00000524627 Q1T7F1 81 aa4.24□□□□□ -1.73
SF3B2-203ENST00000524627 PRR15LQ9BU68 103 aa4.22□□□□□ -1.73
SF3B2-203ENST00000524627 A8MU10 97 aa4.21□□□□□ -1.74
SF3B2-203ENST00000524627 KRTAP5-5Q701N2 237 aaPredicted RBP4.2□□□□□ -1.74
SF3B2-203ENST00000524627 KRTAP12-4P60329 112 aa4.18□□□□□ -1.74
SF3B2-203ENST00000524627 SYNE1Q8NF91 8797 aaKnown RBP4.18□□□□□ -1.74
SF3B2-203ENST00000524627 KRTAP12-3P60328 96 aa4.16□□□□□ -1.74
SF3B2-203ENST00000524627 PSPHP1O15172 72 aa4.15□□□□□ -1.75
SF3B2-203ENST00000524627 UQCR11O14957 56 aa4.12□□□□□ -1.75
SF3B2-203ENST00000524627 LOC100996750A0A140TA64 210 aa4.08□□□□□ -1.76
SF3B2-203ENST00000524627 MIR22HGQ0VDD5 57 aa4.06□□□□□ -1.76
SF3B2-203ENST00000524627 A6NED7 52 aa4□□□□□ -1.77
SF3B2-203ENST00000524627 KRTAP4-11Q9BYQ6 195 aa4□□□□□ -1.77
SF3B2-203ENST00000524627 K7ERS5 55 aa3.96□□□□□ -1.78
SF3B2-203ENST00000524627 CDC42SE1Q9NRR8 79 aa3.95□□□□□ -1.78
SF3B2-203ENST00000524627 AHNAKQ09666 5890 aaKnown RBP3.95□□□□□ -1.78
SF3B2-203ENST00000524627 KRTAP25-1Q3LHN0 102 aa3.92□□□□□ -1.78
SF3B2-203ENST00000524627 MUC5ACP98088 5654 aa3.91□□□□□ -1.78
SF3B2-203ENST00000524627 KRTAP5-2Q701N4 177 aa3.9□□□□□ -1.79
SF3B2-203ENST00000524627 MUC5BQ9HC84 5762 aaPredicted RBP3.89□□□□□ -1.79
SF3B2-203ENST00000524627 KRTAP5-8O75690 187 aa3.87□□□□□ -1.79
SF3B2-203ENST00000524627 BRK1Q8WUW1 75 aa3.86□□□□□ -1.79
SF3B2-203ENST00000524627 KRTAP19-4Q3LI73 84 aa3.85□□□□□ -1.79
SF3B2-203ENST00000524627 KRTAP6-1Q3LI64 71 aa3.83□□□□□ -1.8
SF3B2-203ENST00000524627 PRO0628Q9UI54 55 aa3.82□□□□□ -1.8
SF3B2-203ENST00000524627 MT1AP04731 61 aa3.81□□□□□ -1.8
SF3B2-203ENST00000524627 LCE3CQ5T5A8 94 aa3.8□□□□□ -1.8
SF3B2-203ENST00000524627 OBSCNQ5VST9 7968 aa3.79□□□□□ -1.8
SF3B2-203ENST00000524627 KRTAP15-1Q3LI76 137 aa3.78□□□□□ -1.8
SF3B2-203ENST00000524627 KRTAP23-1A1A580 65 aa3.76□□□□□ -1.81
SF3B2-203ENST00000524627 KRTAP9-9Q9BYP9 154 aa3.73□□□□□ -1.81
SF3B2-203ENST00000524627 KRTAP6-2Q3LI66 62 aa3.72□□□□□ -1.81
SF3B2-203ENST00000524627 KRTAP9-4Q9BYQ2 154 aa3.72□□□□□ -1.81
SF3B2-203ENST00000524627 ROMO1P60602 79 aa3.71□□□□□ -1.82
SF3B2-203ENST00000524627 PMAIP1Q13794 54 aa3.7□□□□□ -1.82
SF3B2-203ENST00000524627 KRTAP9-6A8MVA2 160 aa3.61□□□□□ -1.83
SF3B2-203ENST00000524627 KRTAP5-1Q6L8H4 278 aa3.56□□□□□ -1.84
SF3B2-203ENST00000524627 KTN1-AS1Q86SY8 53 aa3.52□□□□□ -1.85
SF3B2-203ENST00000524627 MT3P25713 68 aa3.51□□□□□ -1.85
SF3B2-203ENST00000524627 PRAC1Q96KF2 57 aa3.37□□□□□ -1.87
SF3B2-203ENST00000524627 SVIPQ8NHG7 77 aa3.33□□□□□ -1.88
SF3B2-203ENST00000524627 LCE1EQ5T753 118 aa3.28□□□□□ -1.88
SF3B2-203ENST00000524627 LCE1BQ5T7P3 118 aa3.16□□□□□ -1.9
SF3B2-203ENST00000524627 KRTAP4-2Q9BYR5 136 aa3.15□□□□□ -1.91
SF3B2-203ENST00000524627 LCE1CQ5T751 118 aa3.05□□□□□ -1.92
SF3B2-203ENST00000524627 KRTAP4-12Q9BQ66 201 aa3□□□□□ -1.93
SF3B2-203ENST00000524627 LUZP6Q538Z0 58 aa2.89□□□□□ -1.95
SF3B2-203ENST00000524627 KRTAP5-11Q6L8G4 156 aa2.81□□□□□ -1.96
SF3B2-203ENST00000524627 LCE1FQ5T754 118 aa2.78□□□□□ -1.96
SF3B2-203ENST00000524627 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.72□□□□□ -1.97
SF3B2-203ENST00000524627 PHGR1C9JFL3 82 aa2.69□□□□□ -1.98
SF3B2-203ENST00000524627 NDUFAF8A1L188 74 aa2.67□□□□□ -1.98
SF3B2-203ENST00000524627 LCE3DQ9BYE3 92 aa2.67□□□□□ -1.98
SF3B2-203ENST00000524627 KRTAP21-2Q3LI59 83 aa2.52□□□□□ -2.01
SF3B2-203ENST00000524627 LCE3EQ5T5B0 92 aa2.49□□□□□ -2.01
SF3B2-203ENST00000524627 A0A0A0MQY5 61 aa2.42□□□□□ -2.02
SF3B2-203ENST00000524627 KRTAP4-4Q9BYR3 166 aa2.39□□□□□ -2.03
SF3B2-203ENST00000524627 MUC19Q7Z5P9 8384 aa2.38□□□□□ -2.03
SF3B2-203ENST00000524627 INE1O15225 51 aa2.32□□□□□ -2.04
SF3B2-203ENST00000524627 H3BS24 57 aa2.19□□□□□ -2.06
SF3B2-203ENST00000524627 KRTAP21-1Q3LI58 79 aa2.04□□□□□ -2.08
SF3B2-203ENST00000524627 PRM1P04553 51 aa1.93□□□□□ -2.1
SF3B2-203ENST00000524627 MUC16Q8WXI7 14507 aa1.74□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 76.6 ms