RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 OBSCNQ5VST9 7968 aa5.44□□□□□ -1.54
PVT1-220ENST00000524165 SPINT4Q6UDR6 99 aa5.39□□□□□ -1.55
PVT1-220ENST00000524165 ETDBQ3ZM63 59 aa5.38□□□□□ -1.55
PVT1-220ENST00000524165 CHKB-CPT1BH3BT56 60 aa5.37□□□□□ -1.55
PVT1-220ENST00000524165 KRTAP12-3P60328 96 aa5.34□□□□□ -1.55
PVT1-220ENST00000524165 ANAPC13Q9BS18 74 aa5.33□□□□□ -1.56
PVT1-220ENST00000524165 TNP1P09430 55 aa5.3□□□□□ -1.56
PVT1-220ENST00000524165 KRTAP12-1P59990 96 aa5.29□□□□□ -1.56
PVT1-220ENST00000524165 FAM240AA0A1B0GVK7 77 aa5.26□□□□□ -1.57
PVT1-220ENST00000524165 SPATA8Q6RVD6 105 aa5.21□□□□□ -1.58
PVT1-220ENST00000524165 SMIM20Q8N5G0 67 aa5.21□□□□□ -1.58
PVT1-220ENST00000524165 MT1AP04731 61 aa5.18□□□□□ -1.58
PVT1-220ENST00000524165 KRTAP6-1Q3LI64 71 aa5.18□□□□□ -1.58
PVT1-220ENST00000524165 KRTAP9-4Q9BYQ2 154 aa5.18□□□□□ -1.58
PVT1-220ENST00000524165 LINC00643Q86TS7 51 aa5.17□□□□□ -1.58
PVT1-220ENST00000524165 CCDC179H3BU77 68 aa5.16□□□□□ -1.58
PVT1-220ENST00000524165 KRTAP5-1Q6L8H4 278 aa5.15□□□□□ -1.59
PVT1-220ENST00000524165 KRTAP6-2Q3LI66 62 aa5.13□□□□□ -1.59
PVT1-220ENST00000524165 RPS28P62857 69 aaKnown RBP5.12□□□□□ -1.59
PVT1-220ENST00000524165 TMEM258P61165 79 aa5.05□□□□□ -1.6
PVT1-220ENST00000524165 KRTAP19-4Q3LI73 84 aa5.05□□□□□ -1.6
PVT1-220ENST00000524165 COX7CP15954 63 aa5.04□□□□□ -1.6
PVT1-220ENST00000524165 SERP1Q9Y6X1 66 aa5.03□□□□□ -1.6
PVT1-220ENST00000524165 A0A1B0GU33 70 aa5.02□□□□□ -1.61
PVT1-220ENST00000524165 SEC61GP60059 68 aa5.02□□□□□ -1.61
PVT1-220ENST00000524165 SERP2Q8N6R1 65 aa4.95□□□□□ -1.62
PVT1-220ENST00000524165 PRO0628Q9UI54 55 aa4.92□□□□□ -1.62
PVT1-220ENST00000524165 SMIM26A0A096LP01 95 aa4.9□□□□□ -1.63
PVT1-220ENST00000524165 ATP5EP56381 51 aaPredicted RBP4.88□□□□□ -1.63
PVT1-220ENST00000524165 KRTAP25-1Q3LHN0 102 aa4.84□□□□□ -1.63
PVT1-220ENST00000524165 LCE3CQ5T5A8 94 aa4.84□□□□□ -1.63
PVT1-220ENST00000524165 SPANXA2-OT1Q8N9U9 137 aa4.84□□□□□ -1.63
PVT1-220ENST00000524165 A8MU10 97 aa4.82□□□□□ -1.64
PVT1-220ENST00000524165 V9GYY9 64 aa4.8□□□□□ -1.64
PVT1-220ENST00000524165 MT3P25713 68 aa4.78□□□□□ -1.64
PVT1-220ENST00000524165 H7BZZ5 65 aa4.76□□□□□ -1.65
PVT1-220ENST00000524165 COA5Q86WW8 74 aa4.73□□□□□ -1.65
PVT1-220ENST00000524165 SNURFQ9Y675 71 aa4.71□□□□□ -1.66
PVT1-220ENST00000524165 KRTAP15-1Q3LI76 137 aa4.7□□□□□ -1.66
PVT1-220ENST00000524165 BRK1Q8WUW1 75 aa4.69□□□□□ -1.66
PVT1-220ENST00000524165 LCE1EQ5T753 118 aa4.63□□□□□ -1.67
PVT1-220ENST00000524165 PMAIP1Q13794 54 aa4.62□□□□□ -1.67
PVT1-220ENST00000524165 Q1T7F1 81 aa4.59□□□□□ -1.67
PVT1-220ENST00000524165 KRTAP9-6A8MVA2 160 aa4.58□□□□□ -1.68
PVT1-220ENST00000524165 A0A1B0GU69 56 aa4.52□□□□□ -1.69
PVT1-220ENST00000524165 KTN1-AS1Q86SY8 53 aa4.5□□□□□ -1.69
PVT1-220ENST00000524165 KRTAP4-2Q9BYR5 136 aa4.43□□□□□ -1.7
PVT1-220ENST00000524165 PSPHP1O15172 72 aa4.39□□□□□ -1.71
PVT1-220ENST00000524165 KRTAP23-1A1A580 65 aa4.37□□□□□ -1.71
PVT1-220ENST00000524165 LCE1BQ5T7P3 118 aa4.37□□□□□ -1.71
PVT1-220ENST00000524165 CDC42SE1Q9NRR8 79 aa4.36□□□□□ -1.71
PVT1-220ENST00000524165 PRR15LQ9BU68 103 aa4.34□□□□□ -1.71
PVT1-220ENST00000524165 A6NED7 52 aa4.32□□□□□ -1.72
PVT1-220ENST00000524165 KRTAP4-12Q9BQ66 201 aa4.31□□□□□ -1.72
PVT1-220ENST00000524165 LCE1CQ5T751 118 aa4.3□□□□□ -1.72
PVT1-220ENST00000524165 LINC01558Q9Y6Z2 57 aa4.28□□□□□ -1.72
PVT1-220ENST00000524165 KRTAP5-11Q6L8G4 156 aa4.16□□□□□ -1.74
PVT1-220ENST00000524165 H3BS24 57 aa4.13□□□□□ -1.75
PVT1-220ENST00000524165 PHGR1C9JFL3 82 aa4.11□□□□□ -1.75
PVT1-220ENST00000524165 LCE1FQ5T754 118 aa4.09□□□□□ -1.75
PVT1-220ENST00000524165 PRAC1Q96KF2 57 aa4.04□□□□□ -1.76
PVT1-220ENST00000524165 UQCR11O14957 56 aa4.03□□□□□ -1.76
PVT1-220ENST00000524165 MIR22HGQ0VDD5 57 aa4.01□□□□□ -1.77
PVT1-220ENST00000524165 K7ERS5 55 aa3.9□□□□□ -1.79
PVT1-220ENST00000524165 ROMO1P60602 79 aa3.88□□□□□ -1.79
PVT1-220ENST00000524165 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.8□□□□□ -1.8
PVT1-220ENST00000524165 NDUFAF8A1L188 74 aa3.56□□□□□ -1.84
PVT1-220ENST00000524165 A0A0A0MQY5 61 aa3.55□□□□□ -1.84
PVT1-220ENST00000524165 LUZP6Q538Z0 58 aa3.46□□□□□ -1.86
PVT1-220ENST00000524165 KRTAP21-2Q3LI59 83 aa3.44□□□□□ -1.86
PVT1-220ENST00000524165 MUC19Q7Z5P9 8384 aa3.38□□□□□ -1.87
PVT1-220ENST00000524165 LCE3DQ9BYE3 92 aa3.3□□□□□ -1.88
PVT1-220ENST00000524165 KRTAP4-4Q9BYR3 166 aa3.25□□□□□ -1.89
PVT1-220ENST00000524165 KRTAP21-1Q3LI58 79 aa3.15□□□□□ -1.91
PVT1-220ENST00000524165 INE1O15225 51 aa3.05□□□□□ -1.92
PVT1-220ENST00000524165 LCE3EQ5T5B0 92 aa2.96□□□□□ -1.94
PVT1-220ENST00000524165 MUC16Q8WXI7 14507 aa2.37□□□□□ -2.03
PVT1-220ENST00000524165 PRM1P04553 51 aa1.93□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 10.3 ms