RNA–Protein interactions for RNA: ENST00000523824.5

NSMCE2-213, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-213ENST00000523824 SCGB1A1P11684 91 aa2.77□□□□□ -1.97
NSMCE2-213ENST00000523824 PCP4L1A6NKN8 68 aa2.75□□□□□ -1.97
NSMCE2-213ENST00000523824 PRAC1Q96KF2 57 aa2.72□□□□□ -1.97
NSMCE2-213ENST00000523824 KRTAP20-2Q3LI61 65 aa2.71□□□□□ -1.98
NSMCE2-213ENST00000523824 SPINT4Q6UDR6 99 aa2.71□□□□□ -1.98
NSMCE2-213ENST00000523824 C10orf95Q9H7T3 257 aa2.68□□□□□ -1.98
NSMCE2-213ENST00000523824 KRTAP12-4P60329 112 aa2.65□□□□□ -1.99
NSMCE2-213ENST00000523824 LCE3AQ5TA76 89 aa2.65□□□□□ -1.99
NSMCE2-213ENST00000523824 SPATA8Q6RVD6 105 aa2.65□□□□□ -1.99
NSMCE2-213ENST00000523824 SEC61GP60059 68 aa2.64□□□□□ -1.99
NSMCE2-213ENST00000523824 SERP1Q9Y6X1 66 aa2.63□□□□□ -1.99
NSMCE2-213ENST00000523824 KRTAP12-1P59990 96 aa2.62□□□□□ -1.99
NSMCE2-213ENST00000523824 KRTAP5-1Q6L8H4 278 aa2.61□□□□□ -1.99
NSMCE2-213ENST00000523824 A0A1B0GU33 70 aa2.6□□□□□ -1.99
NSMCE2-213ENST00000523824 TNP1P09430 55 aa2.6□□□□□ -1.99
NSMCE2-213ENST00000523824 KRTAP5-5Q701N2 237 aaPredicted RBP2.6□□□□□ -1.99
NSMCE2-213ENST00000523824 SMIM20Q8N5G0 67 aa2.6□□□□□ -1.99
NSMCE2-213ENST00000523824 SNURFQ9Y675 71 aa2.6□□□□□ -1.99
NSMCE2-213ENST00000523824 SYNE1Q8NF91 8797 aaKnown RBP2.6□□□□□ -1.99
NSMCE2-213ENST00000523824 SPANXA2-OT1Q8N9U9 137 aa2.59□□□□□ -1.99
NSMCE2-213ENST00000523824 J3QR89 54 aa2.57□□□□□ -2
NSMCE2-213ENST00000523824 KRTAP12-3P60328 96 aa2.56□□□□□ -2
NSMCE2-213ENST00000523824 LCE1FQ5T754 118 aa2.55□□□□□ -2
NSMCE2-213ENST00000523824 COA5Q86WW8 74 aa2.54□□□□□ -2
NSMCE2-213ENST00000523824 SMIM26A0A096LP01 95 aa2.53□□□□□ -2
NSMCE2-213ENST00000523824 NDUFAF8A1L188 74 aa2.53□□□□□ -2
NSMCE2-213ENST00000523824 KRTAP4-4Q9BYR3 166 aa2.53□□□□□ -2
NSMCE2-213ENST00000523824 AHNAKQ09666 5890 aaKnown RBP2.52□□□□□ -2.01
NSMCE2-213ENST00000523824 MUC5ACP98088 5654 aa2.51□□□□□ -2.01
NSMCE2-213ENST00000523824 A8MU10 97 aa2.5□□□□□ -2.01
NSMCE2-213ENST00000523824 KRTAP9-6A8MVA2 160 aa2.5□□□□□ -2.01
NSMCE2-213ENST00000523824 MUC5BQ9HC84 5762 aaPredicted RBP2.49□□□□□ -2.01
NSMCE2-213ENST00000523824 A0A1B0GV90 55 aa2.47□□□□□ -2.01
NSMCE2-213ENST00000523824 KRTAP5-8O75690 187 aa2.46□□□□□ -2.02
NSMCE2-213ENST00000523824 SERP2Q8N6R1 65 aa2.45□□□□□ -2.02
NSMCE2-213ENST00000523824 KRTAP5-2Q701N4 177 aa2.44□□□□□ -2.02
NSMCE2-213ENST00000523824 A0A1B0GU69 56 aa2.43□□□□□ -2.02
NSMCE2-213ENST00000523824 LCE3CQ5T5A8 94 aa2.41□□□□□ -2.02
NSMCE2-213ENST00000523824 OBSCNQ5VST9 7968 aa2.39□□□□□ -2.03
NSMCE2-213ENST00000523824 KRTAP6-1Q3LI64 71 aa2.37□□□□□ -2.03
NSMCE2-213ENST00000523824 MT1AP04731 61 aa2.36□□□□□ -2.03
NSMCE2-213ENST00000523824 K7ERU9 68 aa2.34□□□□□ -2.03
NSMCE2-213ENST00000523824 KRTAP25-1Q3LHN0 102 aa2.33□□□□□ -2.04
NSMCE2-213ENST00000523824 KRTAP6-2Q3LI66 62 aa2.32□□□□□ -2.04
NSMCE2-213ENST00000523824 H7BZZ5 65 aa2.29□□□□□ -2.04
NSMCE2-213ENST00000523824 PRR15LQ9BU68 103 aa2.29□□□□□ -2.04
NSMCE2-213ENST00000523824 V9GYY9 64 aa2.29□□□□□ -2.04
NSMCE2-213ENST00000523824 COX7CP15954 63 aa2.26□□□□□ -2.05
NSMCE2-213ENST00000523824 UQCR11O14957 56 aa2.2□□□□□ -2.06
NSMCE2-213ENST00000523824 LCE3EQ5T5B0 92 aa2.19□□□□□ -2.06
NSMCE2-213ENST00000523824 LINC01558Q9Y6Z2 57 aa2.18□□□□□ -2.06
NSMCE2-213ENST00000523824 PSPHP1O15172 72 aa2.17□□□□□ -2.06
NSMCE2-213ENST00000523824 K7ERS5 55 aa2.16□□□□□ -2.06
NSMCE2-213ENST00000523824 MIR22HGQ0VDD5 57 aa2.13□□□□□ -2.07
NSMCE2-213ENST00000523824 PRO0628Q9UI54 55 aa2.12□□□□□ -2.07
NSMCE2-213ENST00000523824 ATP5EP56381 51 aaPredicted RBP2.07□□□□□ -2.08
NSMCE2-213ENST00000523824 RPS28P62857 69 aaKnown RBP2.07□□□□□ -2.08
NSMCE2-213ENST00000523824 ANAPC13Q9BS18 74 aa2.04□□□□□ -2.08
NSMCE2-213ENST00000523824 LUZP6Q538Z0 58 aa2.03□□□□□ -2.08
NSMCE2-213ENST00000523824 CCDC179H3BU77 68 aa2.01□□□□□ -2.09
NSMCE2-213ENST00000523824 LCE1BQ5T7P3 118 aa1.99□□□□□ -2.09
NSMCE2-213ENST00000523824 CDC42SE1Q9NRR8 79 aa1.99□□□□□ -2.09
NSMCE2-213ENST00000523824 Q1T7F1 81 aa1.97□□□□□ -2.09
NSMCE2-213ENST00000523824 ROMO1P60602 79 aa1.94□□□□□ -2.1
NSMCE2-213ENST00000523824 TMEM258P61165 79 aa1.91□□□□□ -2.1
NSMCE2-213ENST00000523824 LCE1CQ5T751 118 aa1.91□□□□□ -2.1
NSMCE2-213ENST00000523824 A6NED7 52 aa1.87□□□□□ -2.11
NSMCE2-213ENST00000523824 PMAIP1Q13794 54 aa1.81□□□□□ -2.12
NSMCE2-213ENST00000523824 LCE3DQ9BYE3 92 aa1.75□□□□□ -2.13
NSMCE2-213ENST00000523824 PHGR1C9JFL3 82 aa1.74□□□□□ -2.13
NSMCE2-213ENST00000523824 KTN1-AS1Q86SY8 53 aa1.59□□□□□ -2.15
NSMCE2-213ENST00000523824 MUC19Q7Z5P9 8384 aa1.57□□□□□ -2.16
NSMCE2-213ENST00000523824 KRTAP21-2Q3LI59 83 aa1.56□□□□□ -2.16
NSMCE2-213ENST00000523824 BRK1Q8WUW1 75 aa1.34□□□□□ -2.19
NSMCE2-213ENST00000523824 KRTAP21-1Q3LI58 79 aa1.32□□□□□ -2.2
NSMCE2-213ENST00000523824 INE1O15225 51 aa1.28□□□□□ -2.2
NSMCE2-213ENST00000523824 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
NSMCE2-213ENST00000523824 PRM1P04553 51 aa0.98□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 11.7 ms