RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 KTN1-AS1Q86SY8 53 aa4.25□□□□□ -1.73
SDCBP-211ENST00000523441 A0A0A0MQY5 61 aa4.24□□□□□ -1.73
SDCBP-211ENST00000523441 KRTAP5-7Q6L8G8 165 aa4.24□□□□□ -1.73
SDCBP-211ENST00000523441 OCR1Q9BZK8 76 aa4.23□□□□□ -1.73
SDCBP-211ENST00000523441 CAMK2N1Q7Z7J9 78 aa4.22□□□□□ -1.73
SDCBP-211ENST00000523441 SNURFQ9Y675 71 aa4.22□□□□□ -1.73
SDCBP-211ENST00000523441 SPANXA2-OT1Q8N9U9 137 aa4.21□□□□□ -1.74
SDCBP-211ENST00000523441 MT1GP13640 62 aa4.2□□□□□ -1.74
SDCBP-211ENST00000523441 PP632Q6XCG6 107 aa4.2□□□□□ -1.74
SDCBP-211ENST00000523441 KRTAP19-5Q3LI72 72 aa4.18□□□□□ -1.74
SDCBP-211ENST00000523441 MT1MQ8N339 61 aa4.18□□□□□ -1.74
SDCBP-211ENST00000523441 KRTAP4-3Q9BYR4 195 aa4.18□□□□□ -1.74
SDCBP-211ENST00000523441 MP68P56378 58 aa4.17□□□□□ -1.74
SDCBP-211ENST00000523441 KRTAP5-4Q6L8H1 288 aa4.15□□□□□ -1.75
SDCBP-211ENST00000523441 DMAC1Q96GE9 116 aa4.14□□□□□ -1.75
SDCBP-211ENST00000523441 A0A0D9SG42 100 aa4.13□□□□□ -1.75
SDCBP-211ENST00000523441 CDC42SE1Q9NRR8 79 aa4.12□□□□□ -1.75
SDCBP-211ENST00000523441 CHKB-CPT1BH3BT56 60 aa4.07□□□□□ -1.76
SDCBP-211ENST00000523441 MT1LQ93083 61 aa4.07□□□□□ -1.76
SDCBP-211ENST00000523441 KRTAP13-4Q3LI77 160 aa4.06□□□□□ -1.76
SDCBP-211ENST00000523441 A6NED7 52 aa4.04□□□□□ -1.76
SDCBP-211ENST00000523441 PSPHP1O15172 72 aa4.04□□□□□ -1.76
SDCBP-211ENST00000523441 LINC01558Q9Y6Z2 57 aa4.04□□□□□ -1.76
SDCBP-211ENST00000523441 SPTSSBQ8NFR3 76 aa4.02□□□□□ -1.77
SDCBP-211ENST00000523441 KRTAP20-2Q3LI61 65 aa4.01□□□□□ -1.77
SDCBP-211ENST00000523441 PRR15LQ9BU68 103 aa4.01□□□□□ -1.77
SDCBP-211ENST00000523441 ACYP2P14621 99 aa3.99□□□□□ -1.77
SDCBP-211ENST00000523441 COA5Q86WW8 74 aa3.95□□□□□ -1.78
SDCBP-211ENST00000523441 SPINT4Q6UDR6 99 aa3.93□□□□□ -1.78
SDCBP-211ENST00000523441 C10orf95Q9H7T3 257 aa3.92□□□□□ -1.78
SDCBP-211ENST00000523441 LCE3AQ5TA76 89 aa3.88□□□□□ -1.79
SDCBP-211ENST00000523441 KRTAP12-4P60329 112 aa3.87□□□□□ -1.79
SDCBP-211ENST00000523441 SPATA8Q6RVD6 105 aa3.85□□□□□ -1.79
SDCBP-211ENST00000523441 UQCR11O14957 56 aa3.82□□□□□ -1.8
SDCBP-211ENST00000523441 A8MU10 97 aa3.8□□□□□ -1.8
SDCBP-211ENST00000523441 KRTAP5-5Q701N2 237 aaPredicted RBP3.8□□□□□ -1.8
SDCBP-211ENST00000523441 SYNE1Q8NF91 8797 aaKnown RBP3.79□□□□□ -1.8
SDCBP-211ENST00000523441 MT3P25713 68 aa3.78□□□□□ -1.8
SDCBP-211ENST00000523441 A0A1B0GU69 56 aa3.77□□□□□ -1.81
SDCBP-211ENST00000523441 KRTAP12-1P59990 96 aa3.77□□□□□ -1.81
SDCBP-211ENST00000523441 AHNAKQ09666 5890 aaKnown RBP3.76□□□□□ -1.81
SDCBP-211ENST00000523441 MIR22HGQ0VDD5 57 aa3.76□□□□□ -1.81
SDCBP-211ENST00000523441 MUC5ACP98088 5654 aa3.75□□□□□ -1.81
SDCBP-211ENST00000523441 TNP1P09430 55 aa3.71□□□□□ -1.82
SDCBP-211ENST00000523441 KRTAP5-8O75690 187 aa3.69□□□□□ -1.82
SDCBP-211ENST00000523441 KRTAP12-3P60328 96 aa3.69□□□□□ -1.82
SDCBP-211ENST00000523441 PRAC1Q96KF2 57 aa3.68□□□□□ -1.82
SDCBP-211ENST00000523441 ROMO1P60602 79 aa3.67□□□□□ -1.82
SDCBP-211ENST00000523441 MUC5BQ9HC84 5762 aaPredicted RBP3.66□□□□□ -1.82
SDCBP-211ENST00000523441 A0A1B0GU33 70 aa3.66□□□□□ -1.82
SDCBP-211ENST00000523441 K7ERS5 55 aa3.65□□□□□ -1.83
SDCBP-211ENST00000523441 KRTAP25-1Q3LHN0 102 aa3.65□□□□□ -1.83
SDCBP-211ENST00000523441 KRTAP5-2Q701N4 177 aa3.55□□□□□ -1.84
SDCBP-211ENST00000523441 OBSCNQ5VST9 7968 aa3.53□□□□□ -1.84
SDCBP-211ENST00000523441 KRTAP6-1Q3LI64 71 aa3.5□□□□□ -1.85
SDCBP-211ENST00000523441 MT1AP04731 61 aa3.44□□□□□ -1.86
SDCBP-211ENST00000523441 KRTAP6-2Q3LI66 62 aa3.44□□□□□ -1.86
SDCBP-211ENST00000523441 LCE1EQ5T753 118 aa3.4□□□□□ -1.87
SDCBP-211ENST00000523441 LCE1FQ5T754 118 aa3.39□□□□□ -1.87
SDCBP-211ENST00000523441 NDUFAF8A1L188 74 aa3.37□□□□□ -1.87
SDCBP-211ENST00000523441 LCE3CQ5T5A8 94 aa3.34□□□□□ -1.87
SDCBP-211ENST00000523441 KRTAP5-11Q6L8G4 156 aa3.3□□□□□ -1.88
SDCBP-211ENST00000523441 LUZP6Q538Z0 58 aa3.29□□□□□ -1.88
SDCBP-211ENST00000523441 KRTAP5-1Q6L8H4 278 aa3.29□□□□□ -1.88
SDCBP-211ENST00000523441 KRTAP9-6A8MVA2 160 aa3.18□□□□□ -1.9
SDCBP-211ENST00000523441 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.18□□□□□ -1.9
SDCBP-211ENST00000523441 LCE1BQ5T7P3 118 aa2.99□□□□□ -1.93
SDCBP-211ENST00000523441 INE1O15225 51 aa2.98□□□□□ -1.93
SDCBP-211ENST00000523441 LCE3EQ5T5B0 92 aa2.85□□□□□ -1.95
SDCBP-211ENST00000523441 LCE1CQ5T751 118 aa2.74□□□□□ -1.97
SDCBP-211ENST00000523441 PHGR1C9JFL3 82 aa2.64□□□□□ -1.99
SDCBP-211ENST00000523441 KRTAP4-4Q9BYR3 166 aa2.6□□□□□ -1.99
SDCBP-211ENST00000523441 LCE3DQ9BYE3 92 aa2.35□□□□□ -2.03
SDCBP-211ENST00000523441 KRTAP21-2Q3LI59 83 aa2.27□□□□□ -2.05
SDCBP-211ENST00000523441 MUC19Q7Z5P9 8384 aa2.23□□□□□ -2.05
SDCBP-211ENST00000523441 KRTAP21-1Q3LI58 79 aa1.95□□□□□ -2.1
SDCBP-211ENST00000523441 PRM1P04553 51 aa1.75□□□□□ -2.13
SDCBP-211ENST00000523441 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 93.3 ms