RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 A8MU10 97 aa8.59□□□□□ -1.03
PVT1-219ENST00000523427 SMIM26A0A096LP01 95 aa8.56□□□□□ -1.04
PVT1-219ENST00000523427 SERP2Q8N6R1 65 aa8.56□□□□□ -1.04
PVT1-219ENST00000523427 KRTAP12-3P60328 96 aa8.5□□□□□ -1.05
PVT1-219ENST00000523427 KRTAP12-4P60329 112 aa8.49□□□□□ -1.05
PVT1-219ENST00000523427 KRTAP5-5Q701N2 237 aaPredicted RBP8.49□□□□□ -1.05
PVT1-219ENST00000523427 K7ERU9 68 aa8.44□□□□□ -1.06
PVT1-219ENST00000523427 A0A1B0GU69 56 aa8.4□□□□□ -1.06
PVT1-219ENST00000523427 SYNE1Q8NF91 8797 aaKnown RBP8.37□□□□□ -1.07
PVT1-219ENST00000523427 LOC100996750A0A140TA64 210 aa8.34□□□□□ -1.07
PVT1-219ENST00000523427 H7BZZ5 65 aa8.14□□□□□ -1.11
PVT1-219ENST00000523427 COX7CP15954 63 aa8.1□□□□□ -1.11
PVT1-219ENST00000523427 KRTAP4-11Q9BYQ6 195 aa8.1□□□□□ -1.11
PVT1-219ENST00000523427 PRR15LQ9BU68 103 aa7.92□□□□□ -1.14
PVT1-219ENST00000523427 AHNAKQ09666 5890 aaKnown RBP7.88□□□□□ -1.15
PVT1-219ENST00000523427 KRTAP5-2Q701N4 177 aa7.87□□□□□ -1.15
PVT1-219ENST00000523427 KRTAP5-8O75690 187 aa7.84□□□□□ -1.15
PVT1-219ENST00000523427 MUC5ACP98088 5654 aa7.83□□□□□ -1.16
PVT1-219ENST00000523427 KRTAP25-1Q3LHN0 102 aa7.82□□□□□ -1.16
PVT1-219ENST00000523427 KRTAP6-1Q3LI64 71 aa7.8□□□□□ -1.16
PVT1-219ENST00000523427 MUC5BQ9HC84 5762 aaPredicted RBP7.79□□□□□ -1.16
PVT1-219ENST00000523427 KRTAP19-4Q3LI73 84 aa7.79□□□□□ -1.16
PVT1-219ENST00000523427 MT1AP04731 61 aa7.76□□□□□ -1.17
PVT1-219ENST00000523427 LCE3CQ5T5A8 94 aa7.74□□□□□ -1.17
PVT1-219ENST00000523427 KRTAP15-1Q3LI76 137 aa7.72□□□□□ -1.17
PVT1-219ENST00000523427 LINC01558Q9Y6Z2 57 aa7.67□□□□□ -1.18
PVT1-219ENST00000523427 OBSCNQ5VST9 7968 aa7.64□□□□□ -1.19
PVT1-219ENST00000523427 UQCR11O14957 56 aa7.64□□□□□ -1.19
PVT1-219ENST00000523427 KRTAP6-2Q3LI66 62 aa7.58□□□□□ -1.2
PVT1-219ENST00000523427 KRTAP9-9Q9BYP9 154 aa7.57□□□□□ -1.2
PVT1-219ENST00000523427 KRTAP9-4Q9BYQ2 154 aa7.57□□□□□ -1.2
PVT1-219ENST00000523427 ANAPC13Q9BS18 74 aa7.5□□□□□ -1.21
PVT1-219ENST00000523427 MIR22HGQ0VDD5 57 aa7.45□□□□□ -1.22
PVT1-219ENST00000523427 K7ERS5 55 aa7.42□□□□□ -1.22
PVT1-219ENST00000523427 CCDC179H3BU77 68 aa7.41□□□□□ -1.22
PVT1-219ENST00000523427 KRTAP23-1A1A580 65 aa7.4□□□□□ -1.22
PVT1-219ENST00000523427 ATP5EP56381 51 aaPredicted RBP7.4□□□□□ -1.22
PVT1-219ENST00000523427 KRTAP9-6A8MVA2 160 aa7.34□□□□□ -1.23
PVT1-219ENST00000523427 KRTAP5-1Q6L8H4 278 aa7.2□□□□□ -1.26
PVT1-219ENST00000523427 MT3P25713 68 aa7.14□□□□□ -1.27
PVT1-219ENST00000523427 RPS28P62857 69 aaKnown RBP7.03□□□□□ -1.28
PVT1-219ENST00000523427 PSPHP1O15172 72 aa7□□□□□ -1.29
PVT1-219ENST00000523427 TMEM258P61165 79 aa6.98□□□□□ -1.29
PVT1-219ENST00000523427 CDC42SE1Q9NRR8 79 aa6.94□□□□□ -1.3
PVT1-219ENST00000523427 Q1T7F1 81 aa6.88□□□□□ -1.31
PVT1-219ENST00000523427 ROMO1P60602 79 aa6.78□□□□□ -1.32
PVT1-219ENST00000523427 V9GYY9 64 aa6.76□□□□□ -1.33
PVT1-219ENST00000523427 A6NED7 52 aa6.69□□□□□ -1.34
PVT1-219ENST00000523427 LCE1EQ5T753 118 aa6.62□□□□□ -1.35
PVT1-219ENST00000523427 LCE1BQ5T7P3 118 aa6.47□□□□□ -1.37
PVT1-219ENST00000523427 KRTAP4-2Q9BYR5 136 aa6.38□□□□□ -1.39
PVT1-219ENST00000523427 LCE1CQ5T751 118 aa6.16□□□□□ -1.42
PVT1-219ENST00000523427 KRTAP4-12Q9BQ66 201 aa6.13□□□□□ -1.43
PVT1-219ENST00000523427 KRTAP5-11Q6L8G4 156 aa5.65□□□□□ -1.5
PVT1-219ENST00000523427 LCE1FQ5T754 118 aa5.6□□□□□ -1.51
PVT1-219ENST00000523427 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.49□□□□□ -1.53
PVT1-219ENST00000523427 PHGR1C9JFL3 82 aa5.47□□□□□ -1.53
PVT1-219ENST00000523427 LCE3DQ9BYE3 92 aa5.47□□□□□ -1.53
PVT1-219ENST00000523427 KRTAP21-2Q3LI59 83 aa5.11□□□□□ -1.59
PVT1-219ENST00000523427 LCE3EQ5T5B0 92 aa5.03□□□□□ -1.6
PVT1-219ENST00000523427 BRK1Q8WUW1 75 aa4.97□□□□□ -1.61
PVT1-219ENST00000523427 PCP4P48539 62 aa4.91□□□□□ -1.62
PVT1-219ENST00000523427 KRTAP4-4Q9BYR3 166 aa4.91□□□□□ -1.62
PVT1-219ENST00000523427 MUC19Q7Z5P9 8384 aa4.77□□□□□ -1.65
PVT1-219ENST00000523427 PRAC1Q96KF2 57 aa4.7□□□□□ -1.66
PVT1-219ENST00000523427 PMAIP1Q13794 54 aa4.6□□□□□ -1.67
PVT1-219ENST00000523427 KRTAP21-1Q3LI58 79 aa4.11□□□□□ -1.75
PVT1-219ENST00000523427 LUZP6Q538Z0 58 aa4.03□□□□□ -1.76
PVT1-219ENST00000523427 SVIPQ8NHG7 77 aa3.69□□□□□ -1.82
PVT1-219ENST00000523427 KTN1-AS1Q86SY8 53 aa3.55□□□□□ -1.84
PVT1-219ENST00000523427 PRM1P04553 51 aa3.47□□□□□ -1.85
PVT1-219ENST00000523427 PRO0628Q9UI54 55 aa3.47□□□□□ -1.85
PVT1-219ENST00000523427 MUC16Q8WXI7 14507 aa3.3□□□□□ -1.88
PVT1-219ENST00000523427 H3BS24 57 aa2.93□□□□□ -1.94
PVT1-219ENST00000523427 NDUFAF8A1L188 74 aa2.44□□□□□ -2.02
PVT1-219ENST00000523427 A0A0A0MQY5 61 aa2.04□□□□□ -2.08
PVT1-219ENST00000523427 INE1O15225 51 aa1.93□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 5.6 ms