RNA–Protein interactions for RNA: ENST00000522644.5

CNOT8-222, Transcript of CCR4-NOT transcription complex subunit 8, human

TSL 5

Gene CNOT8, Length 1,027 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT8-222	ENST00000522644	NDUFAF8	A1L188	74 aa		5.17	□□□□□ -1.58
CNOT8-222	ENST00000522644	CHKB-CPT1B	H3BT56	60 aa		5.17	□□□□□ -1.58
CNOT8-222	ENST00000522644	KRTAP5-4	Q6L8H1	288 aa		5.17	□□□□□ -1.58
CNOT8-222	ENST00000522644	MT1L	Q93083	61 aa		5.15	□□□□□ -1.59
CNOT8-222	ENST00000522644	PP632	Q6XCG6	107 aa		5.14	□□□□□ -1.59
CNOT8-222	ENST00000522644	PRAC1	Q96KF2	57 aa		5.09	□□□□□ -1.59
CNOT8-222	ENST00000522644		A0A1B0GV90	55 aa		5.05	□□□□□ -1.6
CNOT8-222	ENST00000522644	KRTAP5-7	Q6L8G8	165 aa		5.04	□□□□□ -1.6
CNOT8-222	ENST00000522644	SNURF	Q9Y675	71 aa		5.04	□□□□□ -1.6
CNOT8-222	ENST00000522644	SPATA8	Q6RVD6	105 aa		5.02	□□□□□ -1.61
CNOT8-222	ENST00000522644	SPINT4	Q6UDR6	99 aa		5	□□□□□ -1.61
CNOT8-222	ENST00000522644	KRTAP12-1	P59990	96 aa		4.99	□□□□□ -1.61
CNOT8-222	ENST00000522644	C10orf95	Q9H7T3	257 aa		4.97	□□□□□ -1.61
CNOT8-222	ENST00000522644	LCE3A	Q5TA76	89 aa		4.96	□□□□□ -1.62
CNOT8-222	ENST00000522644		J3QR89	54 aa		4.95	□□□□□ -1.62
CNOT8-222	ENST00000522644	SPANXA2-OT1	Q8N9U9	137 aa		4.95	□□□□□ -1.62
CNOT8-222	ENST00000522644	KRTAP4-4	Q9BYR3	166 aa		4.95	□□□□□ -1.62
CNOT8-222	ENST00000522644	SMIM20	Q8N5G0	67 aa		4.94	□□□□□ -1.62
CNOT8-222	ENST00000522644	KRTAP20-2	Q3LI61	65 aa		4.9	□□□□□ -1.63
CNOT8-222	ENST00000522644	COA5	Q86WW8	74 aa		4.89	□□□□□ -1.63
CNOT8-222	ENST00000522644		A0A1B0GU33	70 aa		4.86	□□□□□ -1.63
CNOT8-222	ENST00000522644	SERP1	Q9Y6X1	66 aa		4.85	□□□□□ -1.63
CNOT8-222	ENST00000522644	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.83	□□□□□ -1.64
CNOT8-222	ENST00000522644	SEC61G	P60059	68 aa		4.82	□□□□□ -1.64
CNOT8-222	ENST00000522644	SPRR5	A0A1B0GTR4	108 aa		4.8	□□□□□ -1.64
CNOT8-222	ENST00000522644		A8MU10	97 aa		4.79	□□□□□ -1.64
CNOT8-222	ENST00000522644	SYNE1	Q8NF91	8797 aa	Known RBP	4.79	□□□□□ -1.64
CNOT8-222	ENST00000522644	LCE3E	Q5T5B0	92 aa		4.78	□□□□□ -1.64
CNOT8-222	ENST00000522644	TNP1	P09430	55 aa		4.76	□□□□□ -1.65
CNOT8-222	ENST00000522644	SERP2	Q8N6R1	65 aa		4.73	□□□□□ -1.65
CNOT8-222	ENST00000522644	KRTAP12-3	P60328	96 aa		4.72	□□□□□ -1.65
CNOT8-222	ENST00000522644	KRTAP12-4	P60329	112 aa		4.69	□□□□□ -1.66
CNOT8-222	ENST00000522644	SMIM26	A0A096LP01	95 aa		4.68	□□□□□ -1.66
CNOT8-222	ENST00000522644		K7ERU9	68 aa		4.62	□□□□□ -1.67
CNOT8-222	ENST00000522644		A0A1B0GU69	56 aa		4.58	□□□□□ -1.68
CNOT8-222	ENST00000522644	AHNAK	Q09666	5890 aa	Known RBP	4.54	□□□□□ -1.68
CNOT8-222	ENST00000522644		H7BZZ5	65 aa		4.54	□□□□□ -1.68
CNOT8-222	ENST00000522644	OBSCN	Q5VST9	7968 aa		4.5	□□□□□ -1.69
CNOT8-222	ENST00000522644	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.49	□□□□□ -1.69
CNOT8-222	ENST00000522644	COX7C	P15954	63 aa		4.48	□□□□□ -1.69
CNOT8-222	ENST00000522644	KRTAP5-2	Q701N4	177 aa		4.48	□□□□□ -1.69
CNOT8-222	ENST00000522644	MUC5AC	P98088	5654 aa		4.47	□□□□□ -1.69
CNOT8-222	ENST00000522644	KRTAP5-8	O75690	187 aa		4.43	□□□□□ -1.7
CNOT8-222	ENST00000522644	KRTAP6-1	Q3LI64	71 aa		4.4	□□□□□ -1.71
CNOT8-222	ENST00000522644	MT1A	P04731	61 aa		4.35	□□□□□ -1.71
CNOT8-222	ENST00000522644	KRTAP25-1	Q3LHN0	102 aa		4.31	□□□□□ -1.72
CNOT8-222	ENST00000522644	PRR15L	Q9BU68	103 aa		4.28	□□□□□ -1.72
CNOT8-222	ENST00000522644	KRTAP6-2	Q3LI66	62 aa		4.26	□□□□□ -1.73
CNOT8-222	ENST00000522644	LINC01558	Q9Y6Z2	57 aa		4.26	□□□□□ -1.73
CNOT8-222	ENST00000522644	UQCR11	O14957	56 aa		4.17	□□□□□ -1.74
CNOT8-222	ENST00000522644	CCDC179	H3BU77	68 aa		4.13	□□□□□ -1.75
CNOT8-222	ENST00000522644	ANAPC13	Q9BS18	74 aa		4.09	□□□□□ -1.75
CNOT8-222	ENST00000522644	MIR22HG	Q0VDD5	57 aa		4.07	□□□□□ -1.76
CNOT8-222	ENST00000522644	ATP5E	P56381	51 aa	Predicted RBP	4.03	□□□□□ -1.76
CNOT8-222	ENST00000522644		K7ERS5	55 aa		3.96	□□□□□ -1.78
CNOT8-222	ENST00000522644	LCE1C	Q5T751	118 aa		3.93	□□□□□ -1.78
CNOT8-222	ENST00000522644	LCE1B	Q5T7P3	118 aa		3.93	□□□□□ -1.78
CNOT8-222	ENST00000522644	LCE3D	Q9BYE3	92 aa		3.84	□□□□□ -1.79
CNOT8-222	ENST00000522644	PSPHP1	O15172	72 aa		3.83	□□□□□ -1.8
CNOT8-222	ENST00000522644	TMEM258	P61165	79 aa		3.83	□□□□□ -1.8
CNOT8-222	ENST00000522644	RPS28	P62857	69 aa	Known RBP	3.79	□□□□□ -1.8
CNOT8-222	ENST00000522644		Q1T7F1	81 aa		3.79	□□□□□ -1.8
CNOT8-222	ENST00000522644	CDC42SE1	Q9NRR8	79 aa		3.76	□□□□□ -1.81
CNOT8-222	ENST00000522644	ROMO1	P60602	79 aa		3.72	□□□□□ -1.81
CNOT8-222	ENST00000522644		V9GYY9	64 aa		3.64	□□□□□ -1.83
CNOT8-222	ENST00000522644		A6NED7	52 aa		3.62	□□□□□ -1.83
CNOT8-222	ENST00000522644	MUC19	Q7Z5P9	8384 aa		3.16	□□□□□ -1.9
CNOT8-222	ENST00000522644	PHGR1	C9JFL3	82 aa		3.03	□□□□□ -1.92
CNOT8-222	ENST00000522644	KRTAP21-2	Q3LI59	83 aa		2.91	□□□□□ -1.94
CNOT8-222	ENST00000522644	BRK1	Q8WUW1	75 aa		2.78	□□□□□ -1.96
CNOT8-222	ENST00000522644	PRO0628	Q9UI54	55 aa		2.64	□□□□□ -1.99
CNOT8-222	ENST00000522644	PMAIP1	Q13794	54 aa		2.63	□□□□□ -1.99
CNOT8-222	ENST00000522644	KTN1-AS1	Q86SY8	53 aa		2.48	□□□□□ -2.01
CNOT8-222	ENST00000522644	KRTAP21-1	Q3LI58	79 aa		2.27	□□□□□ -2.05
CNOT8-222	ENST00000522644	LUZP6	Q538Z0	58 aa		2.07	□□□□□ -2.08
CNOT8-222	ENST00000522644	PRM1	P04553	51 aa		1.92	□□□□□ -2.1
CNOT8-222	ENST00000522644	MUC16	Q8WXI7	14507 aa		1.85	□□□□□ -2.11
CNOT8-222	ENST00000522644	INE1	O15225	51 aa		1.56	□□□□□ -2.16

Retrieved 78 of 20,778 RNA–protein pairs in 132 ms