RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 MUC12Q9UKN1 5478 aa0.06□□□□□ -2.4
SKP1-209ENST00000522552 DNHD1Q96M86 4753 aa0.06□□□□□ -2.4
SKP1-209ENST00000522552 A0A096LNI7 61 aa0.06□□□□□ -2.4
SKP1-209ENST00000522552 TMEM167AQ8TBQ9 72 aa0.06□□□□□ -2.4
SKP1-209ENST00000522552 MKI67P46013 3256 aaKnown RBP0.05□□□□□ -2.4
SKP1-209ENST00000522552 EYSQ5T1H1 3165 aa0.05□□□□□ -2.4
SKP1-209ENST00000522552 KRTAP19-7Q3SYF9 63 aa0.05□□□□□ -2.4
SKP1-209ENST00000522552 XIRP2A4UGR9 3374 aa0.04□□□□□ -2.4
SKP1-209ENST00000522552 DEFB136Q30KP8 78 aa0.04□□□□□ -2.4
SKP1-209ENST00000522552 RYR1P21817 5038 aa0.04□□□□□ -2.4
SKP1-209ENST00000522552 WDFY4Q6ZS81 3184 aa0.01□□□□□ -2.41
SKP1-209ENST00000522552 MT1EP04732 61 aa0.01□□□□□ -2.41
SKP1-209ENST00000522552 FREM2Q5SZK8 3169 aa-0□□□□□ -2.41
SKP1-209ENST00000522552 CEP295Q9C0D2 2601 aa-0□□□□□ -2.41
SKP1-209ENST00000522552 KRTAP19-8Q3LI54 63 aa-0.02□□□□□ -2.41
SKP1-209ENST00000522552 H3BUX3 64 aa-0.02□□□□□ -2.41
SKP1-209ENST00000522552 MYO15AQ9UKN7 3530 aa-0.02□□□□□ -2.41
SKP1-209ENST00000522552 RPL39P5Q59GN2 51 aa-0.03□□□□□ -2.41
SKP1-209ENST00000522552 DCHS1Q96JQ0 3298 aa-0.03□□□□□ -2.41
SKP1-209ENST00000522552 MT1LQ93083 61 aa-0.04□□□□□ -2.42
SKP1-209ENST00000522552 KRTAP6-1Q3LI64 71 aa-0.05□□□□□ -2.42
SKP1-209ENST00000522552 BOD1L1Q8NFC6 3051 aa-0.06□□□□□ -2.42
SKP1-209ENST00000522552 CEP350Q5VT06 3117 aa-0.07□□□□□ -2.42
SKP1-209ENST00000522552 PCNTO95613 3336 aa-0.07□□□□□ -2.42
SKP1-209ENST00000522552 DEFB124Q8NES8 71 aa-0.07□□□□□ -2.42
SKP1-209ENST00000522552 EPPK1P58107 5090 aaKnown RBP-0.07□□□□□ -2.42
SKP1-209ENST00000522552 HTN1P15515 57 aa-0.08□□□□□ -2.42
SKP1-209ENST00000522552 MT1XP80297 61 aa-0.08□□□□□ -2.42
SKP1-209ENST00000522552 DEFB108AA8MXU0 73 aa-0.09□□□□□ -2.42
SKP1-209ENST00000522552 DEFB4AO15263 64 aa-0.11□□□□□ -2.43
SKP1-209ENST00000522552 DEFB133Q30KQ1 61 aa-0.11□□□□□ -2.43
SKP1-209ENST00000522552 RYR2Q92736 4967 aa-0.13□□□□□ -2.43
SKP1-209ENST00000522552 BIRC6Q9NR09 4857 aa-0.15□□□□□ -2.43
SKP1-209ENST00000522552 RNF213Q63HN8 5207 aa-0.15□□□□□ -2.43
SKP1-209ENST00000522552 CENPEQ02224 2701 aa-0.15□□□□□ -2.43
SKP1-209ENST00000522552 HERC2O95714 4834 aa-0.16□□□□□ -2.43
SKP1-209ENST00000522552 KRTAP20-1Q3LI63 56 aa-0.16□□□□□ -2.44
SKP1-209ENST00000522552 WDFY3Q8IZQ1 3526 aa-0.18□□□□□ -2.44
SKP1-209ENST00000522552 LOC400499M0QZD8 3231 aa-0.18□□□□□ -2.44
SKP1-209ENST00000522552 APELAP0DMC3 54 aa-0.19□□□□□ -2.44
SKP1-209ENST00000522552 ASPMQ8IZT6 3477 aa-0.2□□□□□ -2.44
SKP1-209ENST00000522552 USP34Q70CQ2 3546 aa-0.21□□□□□ -2.44
SKP1-209ENST00000522552 MT1GP13640 62 aa-0.22□□□□□ -2.44
SKP1-209ENST00000522552 RPS29P62273 56 aaKnown RBP-0.22□□□□□ -2.44
SKP1-209ENST00000522552 RYR3Q15413 4870 aa-0.23□□□□□ -2.45
SKP1-209ENST00000522552 KRTAP20-2Q3LI61 65 aa-0.24□□□□□ -2.45
SKP1-209ENST00000522552 MT4P47944 62 aa-0.24□□□□□ -2.45
SKP1-209ENST00000522552 HYDINQ4G0P3 5121 aa-0.25□□□□□ -2.45
SKP1-209ENST00000522552 KIAA1109Q2LD37 5005 aa-0.26□□□□□ -2.45
SKP1-209ENST00000522552 UNC80Q8N2C7 3258 aa-0.29□□□□□ -2.46
SKP1-209ENST00000522552 CD52P31358 61 aa-0.3□□□□□ -2.46
SKP1-209ENST00000522552 CFAP47Q6ZTR5 3102 aa-0.3□□□□□ -2.46
SKP1-209ENST00000522552 ABCA13Q86UQ4 5058 aa-0.33□□□□□ -2.46
SKP1-209ENST00000522552 MT2AP02795 61 aa-0.33□□□□□ -2.46
SKP1-209ENST00000522552 MT1MQ8N339 61 aa-0.33□□□□□ -2.46
SKP1-209ENST00000522552 EP400Q96L91 3159 aa-0.34□□□□□ -2.46
SKP1-209ENST00000522552 MT1HL1P0DM35 61 aa-0.35□□□□□ -2.47
SKP1-209ENST00000522552 A0A096LPF7 62 aa-0.36□□□□□ -2.47
SKP1-209ENST00000522552 SPEGQ15772 3267 aa-0.36□□□□□ -2.47
SKP1-209ENST00000522552 LINC01556Q5JQF7 62 aa-0.37□□□□□ -2.47
SKP1-209ENST00000522552 UTRNP46939 3433 aa-0.38□□□□□ -2.47
SKP1-209ENST00000522552 BRCA2P51587 3418 aa-0.38□□□□□ -2.47
SKP1-209ENST00000522552 VCANP13611 3396 aa-0.43□□□□□ -2.48
SKP1-209ENST00000522552 DNAH14Q0VDD8 3507 aa-0.48□□□□□ -2.49
SKP1-209ENST00000522552 CENPFP49454 3210 aa-0.5□□□□□ -2.49
SKP1-209ENST00000522552 VPS13AQ96RL7 3174 aa-0.5□□□□□ -2.49
SKP1-209ENST00000522552 MT1BP07438 61 aa-0.56□□□□□ -2.5
SKP1-209ENST00000522552 Q9Y3F1 56 aa-0.56□□□□□ -2.5
SKP1-209ENST00000522552 DEFB108BQ8NET1 73 aa-0.56□□□□□ -2.5
SKP1-209ENST00000522552 GOLGB1Q14789 3259 aaKnown RBP-0.58□□□□□ -2.5
SKP1-209ENST00000522552 STATHP02808 62 aa-0.62□□□□□ -2.51
SKP1-209ENST00000522552 MT1FP04733 61 aa-0.63□□□□□ -2.51
SKP1-209ENST00000522552 HTN3P15516 51 aa-0.63□□□□□ -2.51
SKP1-209ENST00000522552 CDH23Q9H251 3354 aa-0.66□□□□□ -2.52
SKP1-209ENST00000522552 KRTAP19-6Q3LI70 58 aa-0.7□□□□□ -2.52
SKP1-209ENST00000522552 KRTAP19-2Q3LHN2 52 aa-0.72□□□□□ -2.53
SKP1-209ENST00000522552 COX14Q96I36 57 aa-0.78□□□□□ -2.53
Retrieved 77 of 20,778 RNA–protein pairs in 8.4 ms