RNA–Protein interactions for RNA: ENST00000521664.1

NDRG1-220, Transcript of N-myc downstream regulated 1, humanhuman

TSL 2

Gene NDRG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-220ENST00000521664 TMEM258P61165 79 aa5.99□□□□□ -1.45
NDRG1-220ENST00000521664 LCE4AQ5TA78 99 aa5.94□□□□□ -1.46
NDRG1-220ENST00000521664 HMCN1Q96RW7 5635 aa5.94□□□□□ -1.46
NDRG1-220ENST00000521664 LCE1DQ5T752 114 aa5.93□□□□□ -1.46
NDRG1-220ENST00000521664 KRTAP4-3Q9BYR4 195 aa5.9□□□□□ -1.46
NDRG1-220ENST00000521664 MT4P47944 62 aa5.89□□□□□ -1.47
NDRG1-220ENST00000521664 KRTAP12-3P60328 96 aa5.89□□□□□ -1.47
NDRG1-220ENST00000521664 MIR22HGQ0VDD5 57 aa5.85□□□□□ -1.47
NDRG1-220ENST00000521664 K7ERS5 55 aa5.81□□□□□ -1.48
NDRG1-220ENST00000521664 KRTAP25-1Q3LHN0 102 aa5.78□□□□□ -1.48
NDRG1-220ENST00000521664 KRTAP5-4Q6L8H1 288 aa5.78□□□□□ -1.48
NDRG1-220ENST00000521664 KRTAP4-7Q9BYR0 210 aa5.76□□□□□ -1.49
NDRG1-220ENST00000521664 AHNAK2Q8IVF2 5795 aa5.74□□□□□ -1.49
NDRG1-220ENST00000521664 V9GYY9 64 aa5.74□□□□□ -1.49
NDRG1-220ENST00000521664 PSPHP1O15172 72 aa5.7□□□□□ -1.5
NDRG1-220ENST00000521664 KRTAP4-6Q9BYQ5 205 aa5.68□□□□□ -1.5
NDRG1-220ENST00000521664 Q1T7F1 81 aa5.64□□□□□ -1.51
NDRG1-220ENST00000521664 PCP4P48539 62 aa5.57□□□□□ -1.52
NDRG1-220ENST00000521664 KRTAP19-4Q3LI73 84 aa5.57□□□□□ -1.52
NDRG1-220ENST00000521664 KRTAP23-1A1A580 65 aa5.55□□□□□ -1.52
NDRG1-220ENST00000521664 A6NED7 52 aa5.53□□□□□ -1.52
NDRG1-220ENST00000521664 KRTAP5-5Q701N2 237 aaPredicted RBP5.52□□□□□ -1.53
NDRG1-220ENST00000521664 KRTAP5-10Q6L8G5 202 aa5.51□□□□□ -1.53
NDRG1-220ENST00000521664 KRTAP12-4P60329 112 aa5.49□□□□□ -1.53
NDRG1-220ENST00000521664 KRTAP15-1Q3LI76 137 aa5.49□□□□□ -1.53
NDRG1-220ENST00000521664 KRTAP20-2Q3LI61 65 aa5.48□□□□□ -1.53
NDRG1-220ENST00000521664 SYNE1Q8NF91 8797 aaKnown RBP5.46□□□□□ -1.53
NDRG1-220ENST00000521664 LOC100996750A0A140TA64 210 aa5.46□□□□□ -1.54
NDRG1-220ENST00000521664 SPRR5A0A1B0GTR4 108 aa5.46□□□□□ -1.54
NDRG1-220ENST00000521664 CDC42SE1Q9NRR8 79 aa5.45□□□□□ -1.54
NDRG1-220ENST00000521664 LCE3CQ5T5A8 94 aa5.4□□□□□ -1.54
NDRG1-220ENST00000521664 KRTAP5-3Q6L8H2 238 aa5.39□□□□□ -1.55
NDRG1-220ENST00000521664 ROMO1P60602 79 aa5.35□□□□□ -1.55
NDRG1-220ENST00000521664 RPS28P62857 69 aaKnown RBP5.31□□□□□ -1.56
NDRG1-220ENST00000521664 KRTAP5-7Q6L8G8 165 aa5.31□□□□□ -1.56
NDRG1-220ENST00000521664 MT1AP04731 61 aa5.17□□□□□ -1.58
NDRG1-220ENST00000521664 KRTAP6-1Q3LI64 71 aa5.14□□□□□ -1.59
NDRG1-220ENST00000521664 KRTAP5-2Q701N4 177 aa5.05□□□□□ -1.6
NDRG1-220ENST00000521664 KRTAP9-6A8MVA2 160 aa5.04□□□□□ -1.6
NDRG1-220ENST00000521664 KRTAP4-11Q9BYQ6 195 aa5.03□□□□□ -1.6
NDRG1-220ENST00000521664 KRTAP9-4Q9BYQ2 154 aa5.01□□□□□ -1.61
NDRG1-220ENST00000521664 KRTAP6-2Q3LI66 62 aa4.93□□□□□ -1.62
NDRG1-220ENST00000521664 OBSCNQ5VST9 7968 aa4.86□□□□□ -1.63
NDRG1-220ENST00000521664 KRTAP5-8O75690 187 aa4.83□□□□□ -1.64
NDRG1-220ENST00000521664 AHNAKQ09666 5890 aaKnown RBP4.79□□□□□ -1.64
NDRG1-220ENST00000521664 MUC5BQ9HC84 5762 aaPredicted RBP4.78□□□□□ -1.64
NDRG1-220ENST00000521664 MT3P25713 68 aa4.77□□□□□ -1.65
NDRG1-220ENST00000521664 MUC5ACP98088 5654 aa4.69□□□□□ -1.66
NDRG1-220ENST00000521664 BRK1Q8WUW1 75 aa4.66□□□□□ -1.66
NDRG1-220ENST00000521664 KRTAP9-9Q9BYP9 154 aa4.65□□□□□ -1.67
NDRG1-220ENST00000521664 SVIPQ8NHG7 77 aa4.6□□□□□ -1.67
NDRG1-220ENST00000521664 KRTAP5-1Q6L8H4 278 aa4.53□□□□□ -1.68
NDRG1-220ENST00000521664 PRO0628Q9UI54 55 aa4.43□□□□□ -1.7
NDRG1-220ENST00000521664 PMAIP1Q13794 54 aa4.39□□□□□ -1.71
NDRG1-220ENST00000521664 LCE1EQ5T753 118 aa4.36□□□□□ -1.71
NDRG1-220ENST00000521664 PRAC1Q96KF2 57 aa4.21□□□□□ -1.74
NDRG1-220ENST00000521664 LCE1BQ5T7P3 118 aa4.15□□□□□ -1.75
NDRG1-220ENST00000521664 KTN1-AS1Q86SY8 53 aa4.14□□□□□ -1.75
NDRG1-220ENST00000521664 KRTAP4-2Q9BYR5 136 aa4.09□□□□□ -1.75
NDRG1-220ENST00000521664 LCE1CQ5T751 118 aa4.04□□□□□ -1.76
NDRG1-220ENST00000521664 LCE3DQ9BYE3 92 aa3.91□□□□□ -1.78
NDRG1-220ENST00000521664 KRTAP4-12Q9BQ66 201 aa3.76□□□□□ -1.81
NDRG1-220ENST00000521664 LCE3EQ5T5B0 92 aa3.67□□□□□ -1.82
NDRG1-220ENST00000521664 LUZP6Q538Z0 58 aa3.66□□□□□ -1.82
NDRG1-220ENST00000521664 KRTAP5-11Q6L8G4 156 aa3.65□□□□□ -1.83
NDRG1-220ENST00000521664 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.65□□□□□ -1.83
NDRG1-220ENST00000521664 LCE1FQ5T754 118 aa3.59□□□□□ -1.83
NDRG1-220ENST00000521664 KRTAP21-2Q3LI59 83 aa3.37□□□□□ -1.87
NDRG1-220ENST00000521664 H3BS24 57 aa3.32□□□□□ -1.88
NDRG1-220ENST00000521664 PHGR1C9JFL3 82 aa3.25□□□□□ -1.89
NDRG1-220ENST00000521664 NDUFAF8A1L188 74 aa3.19□□□□□ -1.9
NDRG1-220ENST00000521664 KRTAP4-4Q9BYR3 166 aa3.12□□□□□ -1.91
NDRG1-220ENST00000521664 A0A0A0MQY5 61 aa3.11□□□□□ -1.91
NDRG1-220ENST00000521664 MUC19Q7Z5P9 8384 aa3.01□□□□□ -1.93
NDRG1-220ENST00000521664 PRM1P04553 51 aa2.72□□□□□ -1.97
NDRG1-220ENST00000521664 INE1O15225 51 aa2.62□□□□□ -1.99
NDRG1-220ENST00000521664 KRTAP21-1Q3LI58 79 aa2.47□□□□□ -2.01
NDRG1-220ENST00000521664 MUC16Q8WXI7 14507 aa2.14□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 79.4 ms