RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 DSTQ03001 7570 aaKnown RBP0.95□□□□□ -2.26
HMGN1P28-201ENST00000521340 PCLOQ9Y6V0 5065 aa0.95□□□□□ -2.26
HMGN1P28-201ENST00000521340 SYNE2Q8WXH0 6885 aaKnown RBP0.93□□□□□ -2.26
HMGN1P28-201ENST00000521340 NEBP20929 6669 aa0.93□□□□□ -2.26
HMGN1P28-201ENST00000521340 MT1HL1P0DM35 61 aa0.93□□□□□ -2.26
HMGN1P28-201ENST00000521340 Q5VSD8 79 aa0.93□□□□□ -2.26
HMGN1P28-201ENST00000521340 DNHD1Q96M86 4753 aa0.93□□□□□ -2.26
HMGN1P28-201ENST00000521340 A0A0D9SG42 100 aa0.92□□□□□ -2.26
HMGN1P28-201ENST00000521340 C10orf95Q9H7T3 257 aa0.92□□□□□ -2.26
HMGN1P28-201ENST00000521340 CRIPTQ9P021 101 aa0.92□□□□□ -2.26
HMGN1P28-201ENST00000521340 RYR2Q92736 4967 aa0.91□□□□□ -2.26
HMGN1P28-201ENST00000521340 MYCBP2O75592 4640 aa0.91□□□□□ -2.26
HMGN1P28-201ENST00000521340 M0QZ58 72 aa0.9□□□□□ -2.27
HMGN1P28-201ENST00000521340 KRTAP19-2Q3LHN2 52 aa0.89□□□□□ -2.27
HMGN1P28-201ENST00000521340 MUC17Q685J3 4493 aa0.89□□□□□ -2.27
HMGN1P28-201ENST00000521340 LRP2P98164 4655 aa0.88□□□□□ -2.27
HMGN1P28-201ENST00000521340 KMT2CQ8NEZ4 4911 aaKnown RBP0.88□□□□□ -2.27
HMGN1P28-201ENST00000521340 RYR1P21817 5038 aa0.87□□□□□ -2.27
HMGN1P28-201ENST00000521340 LPAP08519 4548 aa0.87□□□□□ -2.27
HMGN1P28-201ENST00000521340 FSIP2Q5CZC0 6907 aa0.86□□□□□ -2.27
HMGN1P28-201ENST00000521340 KIAA1109Q2LD37 5005 aa0.86□□□□□ -2.27
HMGN1P28-201ENST00000521340 MUC2Q02817 5179 aa0.86□□□□□ -2.27
HMGN1P28-201ENST00000521340 RYR3Q15413 4870 aa0.85□□□□□ -2.27
HMGN1P28-201ENST00000521340 FLGP20930 4061 aaPredicted RBP0.84□□□□□ -2.27
HMGN1P28-201ENST00000521340 PLAC4Q8WY50 150 aa0.83□□□□□ -2.28
HMGN1P28-201ENST00000521340 HERC1Q15751 4861 aa0.82□□□□□ -2.28
HMGN1P28-201ENST00000521340 SPRR2GQ9BYE4 73 aa0.81□□□□□ -2.28
HMGN1P28-201ENST00000521340 BIRC6Q9NR09 4857 aa0.81□□□□□ -2.28
HMGN1P28-201ENST00000521340 EPPK1P58107 5090 aaKnown RBP0.8□□□□□ -2.28
HMGN1P28-201ENST00000521340 TNP1P09430 55 aa0.8□□□□□ -2.28
HMGN1P28-201ENST00000521340 ABCA13Q86UQ4 5058 aa0.79□□□□□ -2.28
HMGN1P28-201ENST00000521340 KMT2DO14686 5537 aa0.78□□□□□ -2.28
HMGN1P28-201ENST00000521340 MT1FP04733 61 aa0.78□□□□□ -2.28
HMGN1P28-201ENST00000521340 KRTAP19-8Q3LI54 63 aa0.78□□□□□ -2.28
HMGN1P28-201ENST00000521340 MDN1Q9NU22 5596 aa0.77□□□□□ -2.29
HMGN1P28-201ENST00000521340 MT2AP02795 61 aa0.77□□□□□ -2.29
HMGN1P28-201ENST00000521340 MT1HP80294 61 aa0.77□□□□□ -2.29
HMGN1P28-201ENST00000521340 KRTAP8-1Q8IUC2 63 aa0.77□□□□□ -2.29
HMGN1P28-201ENST00000521340 HMCN2Q8NDA2 5059 aa0.77□□□□□ -2.29
HMGN1P28-201ENST00000521340 MT1BP07438 61 aa0.76□□□□□ -2.29
HMGN1P28-201ENST00000521340 MT1XP80297 61 aa0.76□□□□□ -2.29
HMGN1P28-201ENST00000521340 MUC5ACP98088 5654 aa0.76□□□□□ -2.29
HMGN1P28-201ENST00000521340 HERC2O95714 4834 aa0.76□□□□□ -2.29
HMGN1P28-201ENST00000521340 FAT4Q6V0I7 4981 aa0.71□□□□□ -2.3
HMGN1P28-201ENST00000521340 M0R2T5 61 aa0.71□□□□□ -2.3
HMGN1P28-201ENST00000521340 KRTAP19-5Q3LI72 72 aa0.69□□□□□ -2.3
HMGN1P28-201ENST00000521340 KRTAP2-3P0C7H8 128 aa0.68□□□□□ -2.3
HMGN1P28-201ENST00000521340 KRTAP19-7Q3SYF9 63 aa0.68□□□□□ -2.3
HMGN1P28-201ENST00000521340 KRTAP19-3Q7Z4W3 81 aa0.68□□□□□ -2.3
HMGN1P28-201ENST00000521340 KRTAP2-4Q9BYR9 128 aa0.68□□□□□ -2.3
HMGN1P28-201ENST00000521340 KRTAP2-1Q9BYU5 128 aa0.68□□□□□ -2.3
HMGN1P28-201ENST00000521340 RNF213Q63HN8 5207 aa0.68□□□□□ -2.3
HMGN1P28-201ENST00000521340 KRTAP20-1Q3LI63 56 aa0.67□□□□□ -2.3
HMGN1P28-201ENST00000521340 MT1EP04732 61 aa0.66□□□□□ -2.3
HMGN1P28-201ENST00000521340 MT1LQ93083 61 aa0.66□□□□□ -2.3
HMGN1P28-201ENST00000521340 KRTAP5-10Q6L8G5 202 aa0.65□□□□□ -2.31
HMGN1P28-201ENST00000521340 KRTAP19-6Q3LI70 58 aa0.63□□□□□ -2.31
HMGN1P28-201ENST00000521340 MUC16Q8WXI7 14507 aa0.61□□□□□ -2.31
HMGN1P28-201ENST00000521340 MT1MQ8N339 61 aa0.61□□□□□ -2.31
HMGN1P28-201ENST00000521340 SSPOA2VEC9 5147 aa0.6□□□□□ -2.31
HMGN1P28-201ENST00000521340 USH2AO75445 5202 aa0.6□□□□□ -2.31
HMGN1P28-201ENST00000521340 MT1GP13640 62 aa0.59□□□□□ -2.31
HMGN1P28-201ENST00000521340 MT1AP04731 61 aa0.56□□□□□ -2.32
HMGN1P28-201ENST00000521340 KRTAP6-1Q3LI64 71 aa0.55□□□□□ -2.32
HMGN1P28-201ENST00000521340 SPRR2FQ96RM1 72 aa0.55□□□□□ -2.32
HMGN1P28-201ENST00000521340 PRM1P04553 51 aa0.52□□□□□ -2.33
HMGN1P28-201ENST00000521340 KRTAP6-2Q3LI66 62 aa0.5□□□□□ -2.33
HMGN1P28-201ENST00000521340 SYNE1Q8NF91 8797 aaKnown RBP0.5□□□□□ -2.33
HMGN1P28-201ENST00000521340 MUC12Q9UKN1 5478 aa0.5□□□□□ -2.33
HMGN1P28-201ENST00000521340 SPRR2EP22531 72 aa0.49□□□□□ -2.33
HMGN1P28-201ENST00000521340 SPRR2BP35325 72 aa0.49□□□□□ -2.33
HMGN1P28-201ENST00000521340 SPRR2AP35326 72 aa0.49□□□□□ -2.33
HMGN1P28-201ENST00000521340 SPRR2DP22532 72 aa0.47□□□□□ -2.33
HMGN1P28-201ENST00000521340 KRTAP21-1Q3LI58 79 aa0.44□□□□□ -2.34
HMGN1P28-201ENST00000521340 KRTAP20-2Q3LI61 65 aa0.43□□□□□ -2.34
HMGN1P28-201ENST00000521340 MT4P47944 62 aa0.4□□□□□ -2.35
HMGN1P28-201ENST00000521340 PHGR1C9JFL3 82 aa0.39□□□□□ -2.35
Retrieved 77 of 20,778 RNA–protein pairs in 182.8 ms